Cow genome map

Conread name: Ss1.1-Pig3-SRG8012J06.5

Conread position: 1-269
Cow position: chr28:9290428-9290695 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 17

Conread position: 1-336
Cow position: chr28:9253280-9253615 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 37

Conread position: 1-346
Cow position: chr28:7810600-7810945 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 221
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 51, 61

Conread position: 1-365
Cow position: chr28:11333876-11333511 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 219
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 355, 0

Conread position: 1-367
Cow position: chr28:9298826-9299190 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 30, 40

Conread position: 1-383
Cow position: chr28:9290345-9290724 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 243
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 309, 38

Conread position: 1-404
Cow position: chr28:7757929-7758332 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 60

Conread position: 1-417
Cow position: chr28:9290010-9290423 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 267
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 39, 113

Conread position: 1-417
Cow position: chr28:11334044-11333629 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 262
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 39

Conread position: 1-418
Cow position: chr28:7757263-7757673 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 272
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 40

Conread position: 1-418
Cow position: chr28:7757593-7758009 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 40

Conread position: 1-418
Cow position: chr28:7757677-7758093 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 40

Conread position: 1-418
Cow position: chr28:7757761-7758177 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 124

Conread position: 1-418
Cow position: chr28:7810441-7810848 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 272
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 116, 93

Conread position: 1-418
Cow position: chr28:9253112-9253528 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 41

Conread position: 1-418
Cow position: chr28:34673364-34673780 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 252
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 42

Conread position: 1-419
Cow position: chr28:7758417-7758833 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 130

Conread position: 1-419
Cow position: chr28:9253196-9253613 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 40

Conread position: 1-421
Cow position: chr28:9299230-9299646 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 258
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 41

Conread position: 2-418
Cow position: chr28:7758334-7758749 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 354, 366

Conread position: 3-411
Cow position: chr28:9290263-9290669 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 264
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 38

Conread position: 3-416
Cow position: chr28:9289851-9290257 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 265
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 29

Conread position: 3-417
Cow position: chr28:7757847-7758260 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 271
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 28, 38

Conread position: 3-418
Cow position: chr28:7757427-7757841 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 38

Conread position: 3-418
Cow position: chr28:9253030-9253444 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 38

Conread position: 4-424
Cow position: chr28:9298579-9298996 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 262
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 13, 9

Conread position: 7-416
Cow position: chr28:11334122-11333712 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 254
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 102, 124

Conread position: 7-417
Cow position: chr28:11333954-11333545 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 253
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 402, 0

Conread position: 7-418
Cow position: chr28:7757515-7757925 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 33

Conread position: 11-355
Cow position: chr28:7810283-7810618 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 220
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 30

Conread position: 37-418
Cow position: chr28:7757215-7757589 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 246
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 18, 8

Conread position: 38-373
Cow position: chr28:34696210-34696545 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 205
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 45-418
Cow position: chr28:7810560-7810932 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 90, 101

Conread position: 58-418
Cow position: chr28:9253003-9253360 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 15

Conread position: 59-368
Cow position: chr28:34679493-34679181 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 72, 65

Conread position: 59-412
Cow position: chr28:7757399-7757751 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 66

Conread position: 72-416
Cow position: chr28:9299217-9299560 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 225
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 54

Conread position: 73-418
Cow position: chr28:9298564-9298906 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 223
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 54

Conread position: 96-345
Cow position: chr28:7810284-7810533 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 23

Conread position: 208-418
Cow position: chr28:7810312-7810521 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 201, 0

Show alignments to all cow chromosomes.