Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8013B15.5 |
| Conread position: | 481-686 |
| Cow position: | chr10:23404150-23404361 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 483-641 |
| Cow position: | chr10:19372393-19372220 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 484-684 |
| Cow position: | chr10:48741214-48741003 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 24, 150 |
| Conread position: | 485-680 |
| Cow position: | chr10:64285849-64285624 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 486-668 |
| Cow position: | chr10:32583859-32584057 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 486-687 |
| Cow position: | chr10:11316901-11317115 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 489-676 |
| Cow position: | chr10:22708149-22708351 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 489-680 |
| Cow position: | chr10:37884842-37884638 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 490-676 |
| Cow position: | chr10:29339437-29339245 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 498-667 |
| Cow position: | chr10:48255260-48255080 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 499-684 |
| Cow position: | chr10:21447946-21447754 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 500-680 |
| Cow position: | chr10:19590796-19590607 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 501-668 |
| Cow position: | chr10:12100578-12100398 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 161 |
| Conread position: | 501-673 |
| Cow position: | chr10:28038966-28038788 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 72, 155 |
| Conread position: | 501-676 |
| Cow position: | chr10:52589721-52589528 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 501-680 |
| Cow position: | chr10:30741349-30741531 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 501-680 |
| Cow position: | chr10:41984919-41984730 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-684 |
| Cow position: | chr10:1108496-1108302 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 501-684 |
| Cow position: | chr10:8413083-8412893 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 126 |
| Conread position: | 501-684 |
| Cow position: | chr10:10124312-10124504 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 501-684 |
| Cow position: | chr10:17863553-17863744 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 73, 177 |
| Conread position: | 501-684 |
| Cow position: | chr10:23948951-23948758 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-686 |
| Cow position: | chr10:16683839-16683647 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 159 |
| Conread position: | 501-687 |
| Cow position: | chr10:37707054-37707252 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-687 |
| Cow position: | chr10:65072148-65071954 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 501-688 |
| Cow position: | chr10:11404168-11403975 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 501-690 |
| Cow position: | chr10:40646648-40646839 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 126, 77 |
| Conread position: | 501-692 |
| Cow position: | chr10:29689364-29689165 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 135 |
| Conread position: | 502-683 |
| Cow position: | chr10:19704544-19704352 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 502-692 |
| Cow position: | chr10:24786077-24786278 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 504-678 |
| Cow position: | chr10:54477073-54477250 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 65 |
| Conread position: | 504-679 |
| Cow position: | chr10:23096809-23096625 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 504-683 |
| Cow position: | chr10:2849320-2849507 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 81, 57 |
| Conread position: | 504-684 |
| Cow position: | chr10:4109559-4109759 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 504-684 |
| Cow position: | chr10:17553153-17553340 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 46 |
| Conread position: | 504-684 |
| Cow position: | chr10:34700601-34700794 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 504-687 |
| Cow position: | chr10:52244676-52244483 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 505-661 |
| Cow position: | chr10:38449339-38449175 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 505-672 |
| Cow position: | chr10:60388793-60388614 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 152 |
| Conread position: | 505-689 |
| Cow position: | chr10:67020594-67020782 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 506-680 |
| Cow position: | chr10:33240707-33240525 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 506-680 |
| Cow position: | chr10:48178329-48178514 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 506-684 |
| Cow position: | chr10:38518655-38518476 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 73, 149 |
| Conread position: | 507-684 |
| Cow position: | chr10:7095855-7096045 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 507-692 |
| Cow position: | chr10:59151891-59151693 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 508-685 |
| Cow position: | chr10:58935191-58935007 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 508-688 |
| Cow position: | chr10:32560677-32560865 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 5 |
| Conread position: | 513-686 |
| Cow position: | chr10:68853630-68853815 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 514-672 |
| Cow position: | chr10:66311192-66311360 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 514-675 |
| Cow position: | chr10:16547456-16547619 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 515-690 |
| Cow position: | chr10:37973286-37973465 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 62, 87 |
| Conread position: | 515-695 |
| Cow position: | chr10:61426753-61426563 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 516-680 |
| Cow position: | chr10:26145427-26145254 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 529-677 |
| Cow position: | chr10:20399405-20399547 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 50 |
| Conread position: | 531-689 |
| Cow position: | chr10:49586469-49586300 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.