Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8013B15.5 |
| Conread position: | 470-677 |
| Cow position: | chr12:28885163-28884940 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 485-684 |
| Cow position: | chr12:40931680-40931469 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 486-686 |
| Cow position: | chr12:33458081-33458289 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 489-667 |
| Cow position: | chr12:27365864-27366055 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 497-686 |
| Cow position: | chr12:34466054-34465852 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 88, 10 |
| Conread position: | 500-683 |
| Cow position: | chr12:24559310-24559504 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-666 |
| Cow position: | chr12:31517218-31517036 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 501-677 |
| Cow position: | chr12:3615955-3616141 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 501-678 |
| Cow position: | chr12:1030933-1031123 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 77, 52 |
| Conread position: | 501-678 |
| Cow position: | chr12:47486785-47486974 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 501-683 |
| Cow position: | chr12:31198720-31198911 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 163 |
| Conread position: | 501-684 |
| Cow position: | chr12:5680636-5680830 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 501-684 |
| Cow position: | chr12:47804110-47804300 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 82, 73 |
| Conread position: | 501-685 |
| Cow position: | chr12:44907970-44908164 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 501-686 |
| Cow position: | chr12:31429615-31429424 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 501-688 |
| Cow position: | chr12:42477965-42478159 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 501-689 |
| Cow position: | chr12:25606658-25606857 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 502-671 |
| Cow position: | chr12:31257974-31258140 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 502-674 |
| Cow position: | chr12:30596422-30596605 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 8 |
| Conread position: | 504-674 |
| Cow position: | chr12:16543625-16543442 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 165 |
| Conread position: | 504-675 |
| Cow position: | chr12:12331552-12331372 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 504-680 |
| Cow position: | chr12:30999183-30999354 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 504-684 |
| Cow position: | chr12:30210439-30210635 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 506-686 |
| Cow position: | chr12:11081141-11080951 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 509-684 |
| Cow position: | chr12:9229539-9229351 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 513-680 |
| Cow position: | chr12:25933650-25933823 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 162 |
| Conread position: | 513-684 |
| Cow position: | chr12:39781374-39781194 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 513-687 |
| Cow position: | chr12:23734350-23734529 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.