Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8013B15.5 |
| Conread position: | 483-666 |
| Cow position: | chr14:47027298-47027496 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 484-615 |
| Cow position: | chr14:41471895-41472036 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 484-684 |
| Cow position: | chr14:40034066-40033864 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 484-690 |
| Cow position: | chr14:13810008-13809786 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 485-686 |
| Cow position: | chr14:37884338-37884546 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 485-686 |
| Cow position: | chr14:38355256-38355045 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 486-683 |
| Cow position: | chr14:26493939-26493731 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 498-684 |
| Cow position: | chr14:38912523-38912345 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 498-686 |
| Cow position: | chr14:39058633-39058433 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 499-684 |
| Cow position: | chr14:6441961-6441765 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 499-690 |
| Cow position: | chr14:18979149-18979339 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 500-683 |
| Cow position: | chr14:20701768-20701958 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 501-668 |
| Cow position: | chr14:48412831-48412991 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 110 |
| Conread position: | 501-671 |
| Cow position: | chr14:12559431-12559606 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 101 |
| Conread position: | 501-680 |
| Cow position: | chr14:21691225-21691414 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 501-680 |
| Cow position: | chr14:25385836-25386024 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 501-680 |
| Cow position: | chr14:37678953-37679141 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-680 |
| Cow position: | chr14:48213131-48212945 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 135 |
| Conread position: | 501-683 |
| Cow position: | chr14:23107374-23107177 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 173 |
| Conread position: | 501-683 |
| Cow position: | chr14:28605283-28605091 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 501-684 |
| Cow position: | chr14:23050569-23050754 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 70, 128 |
| Conread position: | 501-686 |
| Cow position: | chr14:26108683-26108489 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 501-686 |
| Cow position: | chr14:41531614-41531807 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 501-686 |
| Cow position: | chr14:47519702-47519895 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 73, 186 |
| Conread position: | 501-687 |
| Cow position: | chr14:19022848-19023042 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 502-686 |
| Cow position: | chr14:2189682-2189490 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 502-686 |
| Cow position: | chr14:44861187-44861378 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 71, 89 |
| Conread position: | 502-694 |
| Cow position: | chr14:27060501-27060311 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 503-679 |
| Cow position: | chr14:36555106-36555286 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 504-676 |
| Cow position: | chr14:19863385-19863556 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 116, 92 |
| Conread position: | 504-676 |
| Cow position: | chr14:39037269-39037086 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 504-678 |
| Cow position: | chr14:25399119-25398943 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 504-683 |
| Cow position: | chr14:44084441-44084636 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 504-684 |
| Cow position: | chr14:16207450-16207650 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 505-675 |
| Cow position: | chr14:7647972-7648153 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 505-676 |
| Cow position: | chr14:11615174-11615356 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 507-683 |
| Cow position: | chr14:4271333-4271522 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 66 |
| Conread position: | 508-684 |
| Cow position: | chr14:44032079-44031892 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 510-680 |
| Cow position: | chr14:36080877-36081053 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 516-680 |
| Cow position: | chr14:20795808-20795639 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 138 |
| Conread position: | 516-686 |
| Cow position: | chr14:47693730-47693554 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 521-676 |
| Cow position: | chr14:48399539-48399370 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 521-679 |
| Cow position: | chr14:26805020-26805189 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 533-683 |
| Cow position: | chr14:24799689-24799849 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 544-680 |
| Cow position: | chr14:22473230-22473375 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.