Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8013B15.5 |
| Conread position: | 485-676 |
| Cow position: | chr16:18557294-18557086 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 485-686 |
| Cow position: | chr16:45047659-45047449 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 486-680 |
| Cow position: | chr16:51652648-51652848 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 489-674 |
| Cow position: | chr16:27013870-27014076 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 489-684 |
| Cow position: | chr16:46627861-46627661 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 83, 113 |
| Conread position: | 494-689 |
| Cow position: | chr16:10148269-10148478 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 499-684 |
| Cow position: | chr16:11772257-11772064 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 500-680 |
| Cow position: | chr16:15808967-15809159 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 127 |
| Conread position: | 501-676 |
| Cow position: | chr16:11008337-11008524 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 141 |
| Conread position: | 501-676 |
| Cow position: | chr16:51069924-51069738 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 501-679 |
| Cow position: | chr16:8315201-8315013 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 501-680 |
| Cow position: | chr16:14974548-14974368 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 501-680 |
| Cow position: | chr16:53267718-53267904 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 501-681 |
| Cow position: | chr16:45693141-45693325 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 72, 58 |
| Conread position: | 501-683 |
| Cow position: | chr16:48493172-48493365 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 501-684 |
| Cow position: | chr16:19657140-19656960 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 501-686 |
| Cow position: | chr16:13660240-13660047 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 74, 36 |
| Conread position: | 501-689 |
| Cow position: | chr16:18693158-18692958 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 502-680 |
| Cow position: | chr16:19003094-19002910 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 502-684 |
| Cow position: | chr16:16056066-16055876 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 502-684 |
| Cow position: | chr16:52577451-52577643 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 503-684 |
| Cow position: | chr16:56445418-56445237 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 84, 23 |
| Conread position: | 504-606 |
| Cow position: | chr16:13611459-13611354 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 504-676 |
| Cow position: | chr16:26372954-26372767 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 504-679 |
| Cow position: | chr16:54226602-54226415 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 504-680 |
| Cow position: | chr16:6344445-6344258 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 80, 45 |
| Conread position: | 504-680 |
| Cow position: | chr16:51697078-51697275 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 504-680 |
| Cow position: | chr16:53627433-53627253 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 109 |
| Conread position: | 504-681 |
| Cow position: | chr16:42340191-42340378 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 155 |
| Conread position: | 504-684 |
| Cow position: | chr16:29655320-29655518 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 504-688 |
| Cow position: | chr16:27261952-27261770 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 67, 10 |
| Conread position: | 505-668 |
| Cow position: | chr16:689700-689872 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 505-684 |
| Cow position: | chr16:37719154-37719339 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 32, 157 |
| Conread position: | 506-679 |
| Cow position: | chr16:27723221-27723410 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 507-668 |
| Cow position: | chr16:28827180-28827008 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 509-687 |
| Cow position: | chr16:22808558-22808367 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 511-674 |
| Cow position: | chr16:41689695-41689866 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 513-684 |
| Cow position: | chr16:52790059-52790235 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 517-693 |
| Cow position: | chr16:56282955-56283139 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 68 |
| Conread position: | 524-679 |
| Cow position: | chr16:42629428-42629266 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 27 |
Show alignments to all cow chromosomes.