Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8013B15.5 |
| Conread position: | 447-679 |
| Cow position: | chr18:2777846-2777599 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 27 |
| Conread position: | 483-660 |
| Cow position: | chr18:24855903-24855716 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 483-663 |
| Cow position: | chr18:43114005-43113818 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 483-664 |
| Cow position: | chr18:16726588-16726780 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 483-684 |
| Cow position: | chr18:50700628-50700836 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 485-683 |
| Cow position: | chr18:52583933-52584128 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 486-675 |
| Cow position: | chr18:248875-248672 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 489-693 |
| Cow position: | chr18:5711710-5711497 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 142 |
| Conread position: | 497-675 |
| Cow position: | chr18:13360008-13360191 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 163 |
| Conread position: | 501-607 |
| Cow position: | chr18:23476729-23476620 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 501-676 |
| Cow position: | chr18:51298441-51298623 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 501-676 |
| Cow position: | chr18:51537721-51537544 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 501-677 |
| Cow position: | chr18:4578527-4578343 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 501-680 |
| Cow position: | chr18:6075437-6075242 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 501-680 |
| Cow position: | chr18:21139860-21140050 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 501-683 |
| Cow position: | chr18:20127147-20126957 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 159 |
| Conread position: | 501-683 |
| Cow position: | chr18:26372879-26373071 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 501-684 |
| Cow position: | chr18:21574944-21575128 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 113 |
| Conread position: | 501-684 |
| Cow position: | chr18:26843140-26842946 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 501-684 |
| Cow position: | chr18:43712006-43712198 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 501-686 |
| Cow position: | chr18:45961313-45961120 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 190 |
| Conread position: | 501-687 |
| Cow position: | chr18:33843127-33842930 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 501-692 |
| Cow position: | chr18:22411653-22411451 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 69, 124 |
| Conread position: | 502-691 |
| Cow position: | chr18:44493523-44493328 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 503-676 |
| Cow position: | chr18:38126487-38126306 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 503-686 |
| Cow position: | chr18:52757979-52758172 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 176 |
| Conread position: | 504-648 |
| Cow position: | chr18:15689248-15689402 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 504-678 |
| Cow position: | chr18:50993308-50993142 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 123, 60 |
| Conread position: | 504-683 |
| Cow position: | chr18:29796467-29796279 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 69, 154 |
| Conread position: | 504-684 |
| Cow position: | chr18:26458388-26458201 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 131 |
| Conread position: | 505-686 |
| Cow position: | chr18:51271790-51271590 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 506-693 |
| Cow position: | chr18:49981476-49981279 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 511-683 |
| Cow position: | chr18:48036787-48036968 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 516-690 |
| Cow position: | chr18:28297889-28297707 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 17 |
Show alignments to all cow chromosomes.