Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8013B15.5 |
| Conread position: | 485-682 |
| Cow position: | chr22:8397858-8397647 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 486-684 |
| Cow position: | chr22:26184193-26183982 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 486-685 |
| Cow position: | chr22:27224095-27224310 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 147 |
| Conread position: | 489-680 |
| Cow position: | chr22:28685301-28685503 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 489-683 |
| Cow position: | chr22:16234124-16234335 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 497-683 |
| Cow position: | chr22:27508642-27508840 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 103, 86 |
| Conread position: | 498-676 |
| Cow position: | chr22:25477033-25477220 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 500-602 |
| Cow position: | chr22:34726655-34726756 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 501-653 |
| Cow position: | chr22:14509489-14509322 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 501-668 |
| Cow position: | chr22:1081776-1081954 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 501-672 |
| Cow position: | chr22:22999582-22999761 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-676 |
| Cow position: | chr22:41245236-41245423 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 169 |
| Conread position: | 501-679 |
| Cow position: | chr22:19047827-19047637 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 501-680 |
| Cow position: | chr22:2523950-2524146 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 501-680 |
| Cow position: | chr22:5927970-5927787 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 113 |
| Conread position: | 501-680 |
| Cow position: | chr22:15424124-15424312 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 78, 158 |
| Conread position: | 501-684 |
| Cow position: | chr22:9521131-9521314 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 501-684 |
| Cow position: | chr22:13921347-13921530 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 69 |
| Conread position: | 501-684 |
| Cow position: | chr22:25255820-25256007 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 501-684 |
| Cow position: | chr22:42612447-42612641 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-689 |
| Cow position: | chr22:28672133-28672340 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 83, 184 |
| Conread position: | 501-695 |
| Cow position: | chr22:5384643-5384845 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 502-684 |
| Cow position: | chr22:5622726-5622543 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 502-687 |
| Cow position: | chr22:31192583-31192393 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 504-675 |
| Cow position: | chr22:34398465-34398298 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 88 |
| Conread position: | 504-676 |
| Cow position: | chr22:4753764-4753583 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 504-685 |
| Cow position: | chr22:7287501-7287694 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 504-686 |
| Cow position: | chr22:2434205-2434397 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 504-689 |
| Cow position: | chr22:4135607-4135798 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 68, 119 |
| Conread position: | 505-679 |
| Cow position: | chr22:42946056-42945877 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 128 |
| Conread position: | 505-680 |
| Cow position: | chr22:17184694-17184508 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 505-680 |
| Cow position: | chr22:25943467-25943655 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 505-680 |
| Cow position: | chr22:33592439-33592256 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 506-679 |
| Cow position: | chr22:1911658-1911844 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 179 |
| Conread position: | 506-680 |
| Cow position: | chr22:876269-876457 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 506-680 |
| Cow position: | chr22:30699174-30699361 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 506-688 |
| Cow position: | chr22:139307-139127 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 67, 146 |
| Conread position: | 513-683 |
| Cow position: | chr22:18339940-18339763 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 145 |
| Conread position: | 515-676 |
| Cow position: | chr22:4026823-4026991 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 517-678 |
| Cow position: | chr22:29227895-29227741 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 526-681 |
| Cow position: | chr22:29256615-29256781 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 528-674 |
| Cow position: | chr22:29090389-29090230 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 528-688 |
| Cow position: | chr22:32690424-32690253 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 530-675 |
| Cow position: | chr22:25168272-25168121 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 531-680 |
| Cow position: | chr22:4564095-4563945 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 47 |
Show alignments to all cow chromosomes.