Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8013B15.5 |
| Conread position: | 482-686 |
| Cow position: | chr23:35155348-35155563 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 483-680 |
| Cow position: | chr23:3909915-3909706 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 483-683 |
| Cow position: | chr23:5603315-5603090 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 486-672 |
| Cow position: | chr23:17484867-17484663 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 489-676 |
| Cow position: | chr23:11751152-11750955 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 489-676 |
| Cow position: | chr23:17000687-17000876 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 17, 146 |
| Conread position: | 491-684 |
| Cow position: | chr23:32040337-32040521 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 500-680 |
| Cow position: | chr23:40891355-40891546 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 500-684 |
| Cow position: | chr23:30255854-30256053 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 501-626 |
| Cow position: | chr23:27290787-27290665 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 501-674 |
| Cow position: | chr23:20996458-20996633 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 501-675 |
| Cow position: | chr23:28721239-28721060 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 501-676 |
| Cow position: | chr23:19774762-19774946 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-678 |
| Cow position: | chr23:8930143-8929959 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-679 |
| Cow position: | chr23:30655816-30655650 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 501-679 |
| Cow position: | chr23:40525989-40525808 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 112 |
| Conread position: | 501-683 |
| Cow position: | chr23:22272485-22272290 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 501-684 |
| Cow position: | chr23:5389695-5389886 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 501-684 |
| Cow position: | chr23:21847748-21847942 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 501-684 |
| Cow position: | chr23:21866736-21866927 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 82, 185 |
| Conread position: | 501-686 |
| Cow position: | chr23:20171573-20171770 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-686 |
| Cow position: | chr23:38941616-38941809 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 73, 186 |
| Conread position: | 501-687 |
| Cow position: | chr23:26051032-26051228 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 192 |
| Conread position: | 501-691 |
| Cow position: | chr23:13359821-13360021 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 501-694 |
| Cow position: | chr23:35177314-35177520 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 502-687 |
| Cow position: | chr23:36353762-36353949 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 503-680 |
| Cow position: | chr23:36082579-36082768 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 504-679 |
| Cow position: | chr23:23904331-23904145 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 504-680 |
| Cow position: | chr23:14895677-14895486 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 504-680 |
| Cow position: | chr23:15287141-15286949 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 504-680 |
| Cow position: | chr23:27529087-27528910 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 99 |
| Conread position: | 504-687 |
| Cow position: | chr23:18322426-18322239 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 504-687 |
| Cow position: | chr23:40781327-40781523 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 42 |
| Conread position: | 504-689 |
| Cow position: | chr23:8063541-8063739 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 505-676 |
| Cow position: | chr23:24411003-24411185 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 507-684 |
| Cow position: | chr23:20388651-20388460 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 510-690 |
| Cow position: | chr23:347742-347556 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 522-687 |
| Cow position: | chr23:33927822-33927997 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 171 |
Show alignments to all cow chromosomes.