Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8013B15.5 |
| Conread position: | 481-676 |
| Cow position: | chr28:5475051-5474851 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 484-677 |
| Cow position: | chr28:7156810-7157017 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 22, 205 |
| Conread position: | 484-684 |
| Cow position: | chr28:5205252-5205459 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 484-687 |
| Cow position: | chr28:2762176-2762383 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 485-667 |
| Cow position: | chr28:7805447-7805254 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 177 |
| Conread position: | 489-693 |
| Cow position: | chr28:22571684-22571465 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 176 |
| Conread position: | 501-677 |
| Cow position: | chr28:25564081-25564265 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 134 |
| Conread position: | 501-678 |
| Cow position: | chr28:616382-616571 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 501-679 |
| Cow position: | chr28:16041221-16041040 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 501-680 |
| Cow position: | chr28:2517814-2517635 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 501-680 |
| Cow position: | chr28:18934450-18934639 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 72, 124 |
| Conread position: | 501-680 |
| Cow position: | chr28:19253479-19253663 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 72, 151 |
| Conread position: | 501-682 |
| Cow position: | chr28:32366243-32366064 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 68 |
| Conread position: | 501-683 |
| Cow position: | chr28:1202244-1202058 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 72, 36 |
| Conread position: | 501-684 |
| Cow position: | chr28:23007734-23007533 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 501-684 |
| Cow position: | chr28:24500201-24500396 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 501-686 |
| Cow position: | chr28:26372738-26372931 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 25 |
| Conread position: | 501-687 |
| Cow position: | chr28:26719339-26719541 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 501-692 |
| Cow position: | chr28:6643286-6643083 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 501-692 |
| Cow position: | chr28:9294497-9294295 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 501-692 |
| Cow position: | chr28:17601879-17601682 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 83, 174 |
| Conread position: | 501-696 |
| Cow position: | chr28:23676134-23676333 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 83, 132 |
| Conread position: | 502-668 |
| Cow position: | chr28:9176754-9176586 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 82 |
| Conread position: | 502-686 |
| Cow position: | chr28:31165985-31165789 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 502-691 |
| Cow position: | chr28:3823138-3822946 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 502-691 |
| Cow position: | chr28:25825865-25825669 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 54 |
| Conread position: | 503-674 |
| Cow position: | chr28:7540159-7539979 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 503-680 |
| Cow position: | chr28:21570189-21570361 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 121 |
| Conread position: | 504-680 |
| Cow position: | chr28:32365843-32366022 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 80, 141 |
| Conread position: | 504-684 |
| Cow position: | chr28:16214874-16214677 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 504-684 |
| Cow position: | chr28:25249353-25249543 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 140 |
| Conread position: | 506-669 |
| Cow position: | chr28:20963528-20963354 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 506-687 |
| Cow position: | chr28:26784240-26784045 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 539-688 |
| Cow position: | chr28:24700807-24700965 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 15 |
Show alignments to all cow chromosomes.