Cow genome map

Conread name: Ss1.1-Pig3-SRG8013B15.5

Conread position: 462-683
Cow position: chr9:24429014-24429252 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 27

Conread position: 483-663
Cow position: chr9:32991331-32991142 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 80

Conread position: 483-684
Cow position: chr9:6852009-6852225 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 63

Conread position: 483-685
Cow position: chr9:4861446-4861221 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 491-680
Cow position: chr9:32266340-32266537 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 498-688
Cow position: chr9:15006713-15006907 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 39

Conread position: 499-686
Cow position: chr9:33668769-33668565 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 499-692
Cow position: chr9:8657391-8657595 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 501-674
Cow position: chr9:32115563-32115744 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 37

Conread position: 501-674
Cow position: chr9:53794494-53794673 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 20

Conread position: 501-674
Cow position: chr9:55562538-55562351 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 501-676
Cow position: chr9:5829102-5828923 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 157

Conread position: 501-676
Cow position: chr9:27347834-27347652 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 23

Conread position: 501-679
Cow position: chr9:34468540-34468728 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 501-680
Cow position: chr9:8599643-8599455 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 18

Conread position: 501-680
Cow position: chr9:15684750-15684938 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 501-680
Cow position: chr9:26559574-26559765 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 501-680
Cow position: chr9:41958748-41958926 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 69, 102

Conread position: 501-684
Cow position: chr9:12499048-12498855 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 501-686
Cow position: chr9:10666988-10667177 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 37

Conread position: 501-686
Cow position: chr9:20200331-20200143 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 135

Conread position: 501-686
Cow position: chr9:43911966-43911775 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 501-687
Cow position: chr9:20896934-20896742 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 92, 83

Conread position: 501-687
Cow position: chr9:28983220-28983024 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 85, 50

Conread position: 501-688
Cow position: chr9:28947896-28947710 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 84, 39

Conread position: 501-689
Cow position: chr9:39428762-39428959 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 191

Conread position: 501-692
Cow position: chr9:34204167-34203967 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 191

Conread position: 502-679
Cow position: chr9:14960984-14960802 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 113

Conread position: 502-679
Cow position: chr9:25469083-25468905 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 102, 42

Conread position: 502-680
Cow position: chr9:8617853-8617679 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 82

Conread position: 502-683
Cow position: chr9:43037519-43037328 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 503-687
Cow position: chr9:42037688-42037495 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 504-672
Cow position: chr9:60355177-60355362 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 504-677
Cow position: chr9:55321672-55321487 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 504-680
Cow position: chr9:38289291-38289464 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 36

Conread position: 504-684
Cow position: chr9:3387724-3387542 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 80

Conread position: 504-684
Cow position: chr9:3959101-3958919 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 154

Conread position: 504-686
Cow position: chr9:9823472-9823657 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 18

Conread position: 504-688
Cow position: chr9:22318385-22318181 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 504-689
Cow position: chr9:5433667-5433465 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 505-666
Cow position: chr9:6214120-6214286 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 505-680
Cow position: chr9:23042808-23042629 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 37

Conread position: 505-680
Cow position: chr9:38580889-38580707 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 159

Conread position: 506-686
Cow position: chr9:2888015-2887816 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 506-691
Cow position: chr9:5209613-5209422 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 73, 148

Conread position: 506-692
Cow position: chr9:4538827-4539022 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 72, 50

Conread position: 507-687
Cow position: chr9:35100921-35100730 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 508-674
Cow position: chr9:5756957-5757141 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 510-687
Cow position: chr9:60549382-60549571 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 512-692
Cow position: chr9:5399163-5398973 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 116

Conread position: 530-680
Cow position: chr9:34431829-34431669 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 95

Conread position: 530-680
Cow position: chr9:62330989-62331149 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 533-674
Cow position: chr9:48634894-48635048 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.