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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8013E10.3
        

               
Conread position:
               
126-910
               

               
Cow position:
               
chr18:19310054-19310889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
132-390
               

               
Cow position:
               
chr18:42242144-42241868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 262
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr18:603574-602714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 491
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr18:15171769-15172582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr18:29863714-29862857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 171
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr18:33271530-33272356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 384
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr18:36122943-36122107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 157
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr18:52574006-52574854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 320
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:14128385-14127536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 129
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:14418868-14419729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 186
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:16081417-16082238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 570
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:16472272-16471467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
52, 118
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:19355407-19356259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:23801914-23802772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 171
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:24037953-24037099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:25354410-25355267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:25923276-25924121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 187
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:27539322-27540174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 172
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:28969395-28968537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 171
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:37508856-37509710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
28, 189
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:47744642-47745503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 578
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:51459949-51459093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 489
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:51484481-51485339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:51602776-51601915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 578
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:52630367-52629506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 320
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr18:54066158-54065328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
132-924
               

               
Cow position:
               
chr18:16871164-16871961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
132-925
               

               
Cow position:
               
chr18:28928699-28927853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 387
               

               
Conread position:
               
132-928
               

               
Cow position:
               
chr18:40342934-40342090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
132-930
               

               
Cow position:
               
chr18:30877372-30876518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 170
               

               
Conread position:
               
132-1002
               

               
Cow position:
               
chr18:8884035-8884941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
934
               

               
Alignm identity:
               
609
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
132-1068
               

               
Cow position:
               
chr18:24619319-24620329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1020
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 494
               

               
Conread position:
               
132-1074
               

               
Cow position:
               
chr18:38158650-38157630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1030
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 170
               

               
Conread position:
               
132-1074
               

               
Cow position:
               
chr18:54167757-54166734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1035
               

               
Alignm identity:
               
698
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 201
               

               
Conread position:
               
132-1077
               

               
Cow position:
               
chr18:16173722-16172693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1035
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 171
               

               
Conread position:
               
132-1078
               

               
Cow position:
               
chr18:17323287-17324299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1028
               

               
Alignm identity:
               
670
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
132-1080
               

               
Cow position:
               
chr18:35056917-35057928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1019
               

               
Alignm identity:
               
655
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 170
               

               
Conread position:
               
132-1080
               

               
Cow position:
               
chr18:49782387-49781366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1038
               

               
Alignm identity:
               
678
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
133-360
               

               
Cow position:
               
chr18:38090465-38090221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 147
               

               
Conread position:
               
133-1072
               

               
Cow position:
               
chr18:13509158-13508170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1011
               

               
Alignm identity:
               
640
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 341
               

               
Conread position:
               
133-1080
               

               
Cow position:
               
chr18:16391318-16390303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1033
               

               
Alignm identity:
               
648
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
136-369
               

               
Cow position:
               
chr18:44181112-44180864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
136-744
               

               
Cow position:
               
chr18:15858063-15858714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
45, 510
               

               
Conread position:
               
136-750
               

               
Cow position:
               
chr18:37491697-37492358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 143
               

               
Conread position:
               
136-1080
               

               
Cow position:
               
chr18:22412288-22413290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1015
               

               
Alignm identity:
               
652
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 570
               

               
Conread position:
               
176-924
               

               
Cow position:
               
chr18:29798140-29797331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
813
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
202-743
               

               
Cow position:
               
chr18:18854432-18854976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
202-758
               

               
Cow position:
               
chr18:33893528-33894095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
202-919
               

               
Cow position:
               
chr18:4978835-4978122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
202-919
               

               
Cow position:
               
chr18:17335757-17334996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 95
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr18:5535946-5536722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 88
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr18:27989729-27990509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr18:29071395-29072169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr18:52655779-52656548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
202-1039
               

               
Cow position:
               
chr18:10112982-10113877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
908
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 365
               

               
Conread position:
               
202-1068
               

               
Cow position:
               
chr18:37732662-37733607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
951
               

               
Alignm identity:
               
616
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
202-1068
               

               
Cow position:
               
chr18:50093471-50092532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
944
               

               
Alignm identity:
               
616
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 494
               

               
Conread position:
               
202-1071
               

               
Cow position:
               
chr18:51697618-51698558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
945
               

               
Alignm identity:
               
605
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 377
               

               
Conread position:
               
202-1074
               

               
Cow position:
               
chr18:6733990-6733051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
946
               

               
Alignm identity:
               
614
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
203-818
               

               
Cow position:
               
chr18:21797103-21797735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 87
               

               
Conread position:
               
203-922
               

               
Cow position:
               
chr18:28930430-28929703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 21
               

               
Conread position:
               
206-925
               

               
Cow position:
               
chr18:24452790-24453540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
206-1078
               

               
Cow position:
               
chr18:24713002-24712096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
921
               

               
Alignm identity:
               
593
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
207-1011
               

               
Cow position:
               
chr18:6104428-6103561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
73, 441
               

               
Conread position:
               
208-923
               

               
Cow position:
               
chr18:55554229-55555003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 446
               

               
Conread position:
               
208-924
               

               
Cow position:
               
chr18:5569523-5570274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 377
               

               
Conread position:
               
230-1060
               

               
Cow position:
               
chr18:17670958-17670064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
907
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
230-1073
               

               
Cow position:
               
chr18:43129083-43129986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
921
               

               
Alignm identity:
               
630
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 211
               

               
Conread position:
               
232-923
               

               
Cow position:
               
chr18:36511636-36512379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
234-923
               

               
Cow position:
               
chr18:35444364-35443625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
46, 433
               

               
Conread position:
               
256-1080
               

               
Cow position:
               
chr18:51273078-51272208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
892
               

               
Alignm identity:
               
574
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
279-922
               

               
Cow position:
               
chr18:30232486-30231819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
352-925
               

               
Cow position:
               
chr18:39455209-39455784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
353-1030
               

               
Cow position:
               
chr18:54026776-54027471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
255, 260
               

               
Conread position:
               
368-1042
               

               
Cow position:
               
chr18:25199921-25200628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 240
               

               
Conread position:
               
372-756
               

               
Cow position:
               
chr18:43060407-43060035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
386-1078
               

               
Cow position:
               
chr18:36820682-36819952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
387-1075
               

               
Cow position:
               
chr18:12996759-12997479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 59
               

               
Conread position:
               
389-642
               

               
Cow position:
               
chr18:32859838-32859572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 174
               

               
Conread position:
               
389-676
               

               
Cow position:
               
chr18:14479271-14479568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
389-718
               

               
Cow position:
               
chr18:2296917-2296575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
54, 281
               

               
Conread position:
               
389-844
               

               
Cow position:
               
chr18:15485997-15485535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
389-925
               

               
Cow position:
               
chr18:25972876-25972326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 200
               

               
Conread position:
               
389-928
               

               
Cow position:
               
chr18:29044528-29043982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
389-1031
               

               
Cow position:
               
chr18:51300445-51301097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
53, 204
               

               
Conread position:
               
389-1073
               

               
Cow position:
               
chr18:1145358-1144639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 83
               

               
Conread position:
               
390-729
               

               
Cow position:
               
chr18:37561176-37561521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 184
               

               
Conread position:
               
390-909
               

               
Cow position:
               
chr18:36209189-36208650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
52, 284
               

               
Conread position:
               
390-911
               

               
Cow position:
               
chr18:24501954-24502482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
390-916
               

               
Cow position:
               
chr18:14816399-14816953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
48, 168
               

               
Conread position:
               
390-922
               

               
Cow position:
               
chr18:41237724-41238276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 169
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr18:16463461-16462902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 236
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr18:18215831-18215270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 285
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr18:26243273-26242708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 329
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr18:30606881-30607448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 282
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr18:40195298-40195863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr18:43430192-43430750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 92
               

               
Conread position:
               
390-925
               

               
Cow position:
               
chr18:54629967-54629402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
390-928
               

               
Cow position:
               
chr18:43113177-43112646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
390-1032
               

               
Cow position:
               
chr18:226230-225560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
390-1067
               

               
Cow position:
               
chr18:44050205-44050899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
390-1070
               

               
Cow position:
               
chr18:40693422-40694141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 232
               

               
Conread position:
               
390-1072
               

               
Cow position:
               
chr18:36648590-36649295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
390-1074
               

               
Cow position:
               
chr18:16094070-16094798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 281
               

               
Conread position:
               
390-1076
               

               
Cow position:
               
chr18:30846865-30846154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
390-1080
               

               
Cow position:
               
chr18:48548024-48548738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 164
               

               
Conread position:
               
391-919
               

               
Cow position:
               
chr18:17454827-17454274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 192
               

               
Conread position:
               
391-919
               

               
Cow position:
               
chr18:51250856-51251413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
45, 277
               

               
Conread position:
               
391-924
               

               
Cow position:
               
chr18:51331031-51331577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 300
               

               
Conread position:
               
391-928
               

               
Cow position:
               
chr18:41208128-41208690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
391-1080
               

               
Cow position:
               
chr18:26845284-26845996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
394-729
               

               
Cow position:
               
chr18:48529306-48529638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
394-917
               

               
Cow position:
               
chr18:10291920-10292474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 166
               

               
Conread position:
               
394-919
               

               
Cow position:
               
chr18:10896391-10896919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
394-1078
               

               
Cow position:
               
chr18:40078985-40078283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 210
               

               
Conread position:
               
394-1080
               

               
Cow position:
               
chr18:21174999-21175704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 169
               

               
Conread position:
               
395-894
               

               
Cow position:
               
chr18:51309104-51309620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
395-919
               

               
Cow position:
               
chr18:28209949-28209435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
398-654
               

               
Cow position:
               
chr18:17096010-17096273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
414-917
               

               
Cow position:
               
chr18:19461495-19462026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
418-917
               

               
Cow position:
               
chr18:3189977-3190490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
418-923
               

               
Cow position:
               
chr18:16857010-16857537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
418-1078
               

               
Cow position:
               
chr18:43464560-43463845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 286
               

               
Conread position:
               
419-752
               

               
Cow position:
               
chr18:35369309-35368981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
420-762
               

               
Cow position:
               
chr18:29031445-29031081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 193
               

               
Conread position:
               
427-1077
               

               
Cow position:
               
chr18:32280197-32280870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
428-923
               

               
Cow position:
               
chr18:30844683-30844154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
41, 244
               

               
Conread position:
               
437-871
               

               
Cow position:
               
chr18:1022780-1022328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
440-1080
               

               
Cow position:
               
chr18:29223572-29224226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
443-923
               

               
Cow position:
               
chr18:26844837-26844349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
96, 91
               

               
Conread position:
               
443-923
               

               
Cow position:
               
chr18:37677947-37678448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
443-923
               

               
Cow position:
               
chr18:54047123-54047631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
92, 223
               

               
Conread position:
               
444-694
               

               
Cow position:
               
chr18:36908597-36908356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
188, 47
               

               
Conread position:
               
444-771
               

               
Cow position:
               
chr18:28084292-28084624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
80, 222
               

               
Conread position:
               
444-780
               

               
Cow position:
               
chr18:36913126-36912799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
190, 47
               

               
Conread position:
               
444-786
               

               
Cow position:
               
chr18:23716413-23716071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
444-857
               

               
Cow position:
               
chr18:970020-970442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
444-915
               

               
Cow position:
               
chr18:12248934-12249420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
444-919
               

               
Cow position:
               
chr18:53872138-53872623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
79, 221
               

               
Conread position:
               
444-923
               

               
Cow position:
               
chr18:21303746-21304256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 177
               

               
Conread position:
               
444-923
               

               
Cow position:
               
chr18:29078982-29079489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
91, 222
               

               
Conread position:
               
444-923
               

               
Cow position:
               
chr18:43472843-43473338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
444-930
               

               
Cow position:
               
chr18:41837845-41837331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
90, 222
               

               
Conread position:
               
444-1068
               

               
Cow position:
               
chr18:34053043-34052394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 110
               

               
Conread position:
               
445-922
               

               
Cow position:
               
chr18:41957762-41958270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
92, 257
               

               
Conread position:
               
445-923
               

               
Cow position:
               
chr18:31138998-31139501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
90, 269
               

               
Conread position:
               
445-1043
               

               
Cow position:
               
chr18:12269401-12270044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
446-751
               

               
Cow position:
               
chr18:36188141-36187825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
450-1080
               

               
Cow position:
               
chr18:38342260-38341619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
451-710
               

               
Cow position:
               
chr18:14761410-14761671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 187
               

               
Conread position:
               
460-1027
               

               
Cow position:
               
chr18:4889778-4890367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
64, 130
               

               
Conread position:
               
462-923
               

               
Cow position:
               
chr18:33406571-33407043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 180
               

               
Conread position:
               
463-1002
               

               
Cow position:
               
chr18:15688288-15688830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
177, 33
               

               
Conread position:
               
465-922
               

               
Cow position:
               
chr18:47985162-47985617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
6, 167
               

               
Conread position:
               
468-946
               

               
Cow position:
               
chr18:48301195-48300694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
473-928
               

               
Cow position:
               
chr18:28801570-28801092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
483-818
               

               
Cow position:
               
chr18:1062439-1062087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 189
               

               
Conread position:
               
483-922
               

               
Cow position:
               
chr18:37693003-37692534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 168
               

               
Conread position:
               
486-1071
               

               
Cow position:
               
chr18:36778609-36779225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
521-1078
               

               
Cow position:
               
chr18:56425892-56425333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
522-1078
               

               
Cow position:
               
chr18:37612289-37611724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
525-930
               

               
Cow position:
               
chr18:39494122-39494528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
527-907
               

               
Cow position:
               
chr18:20150943-20151326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 162
               

               
Conread position:
               
528-878
               

               
Cow position:
               
chr18:35478166-35478527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
528-928
               

               
Cow position:
               
chr18:54059507-54059092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
531-909
               

               
Cow position:
               
chr18:19401871-19401480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
132, 163
               

               
Conread position:
               
540-924
               

               
Cow position:
               
chr18:37862451-37862041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 171
               

               
Conread position:
               
540-1073
               

               
Cow position:
               
chr18:37334147-37334686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
546-1014
               

               
Cow position:
               
chr18:43781117-43780653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
550-883
               

               
Cow position:
               
chr18:31996294-31996645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 109
               

               
Conread position:
               
551-922
               

               
Cow position:
               
chr18:32122320-32121932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
551-1073
               

               
Cow position:
               
chr18:29240681-29241207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
559-1080
               

               
Cow position:
               
chr18:21768222-21767669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
564-1003
               

               
Cow position:
               
chr18:7049958-7050435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
566-923
               

               
Cow position:
               
chr18:42609300-42608924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
571-765
               

               
Cow position:
               
chr18:47281883-47281679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
571-925
               

               
Cow position:
               
chr18:18247501-18247858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
572-919
               

               
Cow position:
               
chr18:25847968-25847626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
578-905
               

               
Cow position:
               
chr18:16151870-16152189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
584-1074
               

               
Cow position:
               
chr18:45978769-45979279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
585-909
               

               
Cow position:
               
chr18:33157930-33158259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
585-913
               

               
Cow position:
               
chr18:3149344-3148992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
585-919
               

               
Cow position:
               
chr18:11271605-11271255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-919
               

               
Cow position:
               
chr18:14047764-14048111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 26
               

               
Conread position:
               
585-922
               

               
Cow position:
               
chr18:55436740-55436383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-923
               

               
Cow position:
               
chr18:5076788-5076431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 74
               

               
Conread position:
               
585-923
               

               
Cow position:
               
chr18:42628758-42629116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-923
               

               
Cow position:
               
chr18:51345682-51346040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 74
               

               
Conread position:
               
585-923
               

               
Cow position:
               
chr18:51580391-51580033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-1068
               

               
Cow position:
               
chr18:16640842-16641363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-1073
               

               
Cow position:
               
chr18:35013255-35012731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
585-1080
               

               
Cow position:
               
chr18:7649047-7649573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
586-923
               

               
Cow position:
               
chr18:36135243-36134886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
588-922
               

               
Cow position:
               
chr18:32210415-32210064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
589-1078
               

               
Cow position:
               
chr18:23079776-23079243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
595-923
               

               
Cow position:
               
chr18:4949562-4949911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
595-925
               

               
Cow position:
               
chr18:41498277-41498612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
606-926
               

               
Cow position:
               
chr18:48527814-48527500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
178, 30
               

               
Conread position:
               
606-928
               

               
Cow position:
               
chr18:29013946-29013616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
606-1078
               

               
Cow position:
               
chr18:54085447-54084970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
611-923
               

               
Cow position:
               
chr18:29586192-29585860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
614-1080
               

               
Cow position:
               
chr18:50789158-50789648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
615-1068
               

               
Cow position:
               
chr18:4369923-4369445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
624-1068
               

               
Cow position:
               
chr18:36336618-36336155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
625-1080
               

               
Cow position:
               
chr18:39279897-39279416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
627-928
               

               
Cow position:
               
chr18:44486211-44486529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
106, 7
               

               
Conread position:
               
633-922
               

               
Cow position:
               
chr18:27800436-27800133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
634-923
               

               
Cow position:
               
chr18:9364997-9365295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
634-925
               

               
Cow position:
               
chr18:15324623-15324313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
634-994
               

               
Cow position:
               
chr18:21574108-21574491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 6
               

               
Conread position:
               
645-928
               

               
Cow position:
               
chr18:43637847-43638148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
651-879
               

               
Cow position:
               
chr18:44229767-44229534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
651-922
               

               
Cow position:
               
chr18:16437555-16437833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
659-910
               

               
Cow position:
               
chr18:12241287-12241551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
659-949
               

               
Cow position:
               
chr18:44180136-44179847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
659-1078
               

               
Cow position:
               
chr18:16179554-16179986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
659-1080
               

               
Cow position:
               
chr18:51679738-51679292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
668-1080
               

               
Cow position:
               
chr18:45614257-45614702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
672-1080
               

               
Cow position:
               
chr18:51487426-51486997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
675-895
               

               
Cow position:
               
chr18:3566946-3567170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
686-925
               

               
Cow position:
               
chr18:38794478-38794723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
692-925
               

               
Cow position:
               
chr18:27466677-27466924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
702-880
               

               
Cow position:
               
chr18:2144279-2144466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
708-1075
               

               
Cow position:
               
chr18:29030910-29030528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
715-1044
               

               
Cow position:
               
chr18:30035166-30034818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
724-1080
               

               
Cow position:
               
chr18:32908108-32908478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
728-1044
               

               
Cow position:
               
chr18:6460548-6460886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
729-1018
               

               
Cow position:
               
chr18:12080098-12080386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 52
               

               
Conread position:
               
729-1077
               

               
Cow position:
               
chr18:43466344-43466700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
7, 210
               

               
Conread position:
               
735-919
               

               
Cow position:
               
chr18:31563386-31563196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
735-1077
               

               
Cow position:
               
chr18:23617443-23617079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 326
               

               
Conread position:
               
735-1080
               

               
Cow position:
               
chr18:14121286-14121657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 181
               

               
Conread position:
               
736-933
               

               
Cow position:
               
chr18:17341490-17341695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
744-1080
               

               
Cow position:
               
chr18:24293088-24293433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
745-925
               

               
Cow position:
               
chr18:48479374-48479190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
755-1074
               

               
Cow position:
               
chr18:54861410-54861076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
755-1077
               

               
Cow position:
               
chr18:2295613-2295269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
761-923
               

               
Cow position:
               
chr18:33792127-33792287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
761-925
               

               
Cow position:
               
chr18:28793843-28793675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
762-924
               

               
Cow position:
               
chr18:56310154-56309988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 164
               

               
Conread position:
               
762-1080
               

               
Cow position:
               
chr18:56362463-56362128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
766-1032
               

               
Cow position:
               
chr18:23466327-23466044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
766-1051
               

               
Cow position:
               
chr18:35368362-35368056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
93, 272
               

               
Conread position:
               
767-922
               

               
Cow position:
               
chr18:20381754-20381601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
767-1072
               

               
Cow position:
               
chr18:39293080-39292788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
768-925
               

               
Cow position:
               
chr18:37492602-37492769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
769-1073
               

               
Cow position:
               
chr18:10516434-10516755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 295
               

               
Conread position:
               
770-922
               

               
Cow position:
               
chr18:48450919-48451072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
771-919
               

               
Cow position:
               
chr18:871053-871205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr18:2609465-2609313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr18:6878375-6878223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr18:36224033-36224185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr18:42746834-42746981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
771-928
               

               
Cow position:
               
chr18:47800311-47800467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
771-930
               

               
Cow position:
               
chr18:30567545-30567388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
771-1044
               

               
Cow position:
               
chr18:7054810-7055104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-1044
               

               
Cow position:
               
chr18:56482844-56482549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-1071
               

               
Cow position:
               
chr18:31712216-31711893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
88, 299
               

               
Conread position:
               
771-1074
               

               
Cow position:
               
chr18:1955272-1954949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 200
               

               
Conread position:
               
771-1074
               

               
Cow position:
               
chr18:10574306-10574628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 292
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr18:11866624-11866930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
150, 82
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr18:22275787-22275461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
88, 203
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr18:23659292-23658978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 111
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr18:23716038-23715710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
88, 200
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr18:24685710-24686024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr18:25003613-25003301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 106
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr18:28084860-28085187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 295
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr18:33851141-33851466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
89, 269
               

               
Conread position:
               
772-906
               

               
Cow position:
               
chr18:3150959-3150824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
774-923
               

               
Cow position:
               
chr18:21737978-21738130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
776-908
               

               
Cow position:
               
chr18:52933433-52933566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
776-911
               

               
Cow position:
               
chr18:47048358-47048222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
776-922
               

               
Cow position:
               
chr18:5608201-5608348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
776-923
               

               
Cow position:
               
chr18:26568184-26568332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
776-923
               

               
Cow position:
               
chr18:33616818-33616670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
776-924
               

               
Cow position:
               
chr18:36346744-36346894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
776-1022
               

               
Cow position:
               
chr18:45400815-45401054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
142, 84
               

               
Conread position:
               
776-1039
               

               
Cow position:
               
chr18:6091145-6090878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 24
               

               
Conread position:
               
776-1043
               

               
Cow position:
               
chr18:28679660-28679945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
776-1073
               

               
Cow position:
               
chr18:42713-42401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 243
               

               
Conread position:
               
776-1075
               

               
Cow position:
               
chr18:54991267-54991580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
61, 287
               

               
Conread position:
               
776-1077
               

               
Cow position:
               
chr18:14886876-14886561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
776-1080
               

               
Cow position:
               
chr18:17228843-17228526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 189
               

               
Conread position:
               
777-918
               

               
Cow position:
               
chr18:23344514-23344377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
777-1043
               

               
Cow position:
               
chr18:36606198-36606473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
131, 69
               

               
Conread position:
               
778-919
               

               
Cow position:
               
chr18:40651909-40652051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-919
               

               
Cow position:
               
chr18:47814215-47814074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
778-919
               

               
Cow position:
               
chr18:50114681-50114539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-922
               

               
Cow position:
               
chr18:3805195-3805337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
778-922
               

               
Cow position:
               
chr18:36776911-36777060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:7076031-7076175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 72
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:17742103-17742249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:21206985-21207131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:23132088-23131942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:24678483-24678629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:25006322-25006176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:26883326-26883472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:27995285-27995431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:30386399-30386253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:30676920-30677066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:31587419-31587274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:36183795-36183649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:40059282-40059428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:42623110-42622964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:43066496-43066645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:43075520-43075669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:54119138-54118992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:54366210-54366064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr18:55022406-55022552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-925
               

               
Cow position:
               
chr18:42060297-42060442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
778-1058
               

               
Cow position:
               
chr18:50225079-50224797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
146, 81
               

               
Conread position:
               
778-1068
               

               
Cow position:
               
chr18:27102586-27102891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
778-1068
               

               
Cow position:
               
chr18:42425179-42425488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
81, 284
               

               
Conread position:
               
778-1068
               

               
Cow position:
               
chr18:42966096-42966407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 195
               

               
Conread position:
               
778-1078
               

               
Cow position:
               
chr18:11232779-11233088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 271
               

               
Conread position:
               
778-1080
               

               
Cow position:
               
chr18:54274526-54274841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
779-908
               

               
Cow position:
               
chr18:21107178-21107049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
779-919
               

               
Cow position:
               
chr18:949799-949939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
779-1022
               

               
Cow position:
               
chr18:12234599-12234840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 171
               

               
Conread position:
               
779-1067
               

               
Cow position:
               
chr18:11383472-11383754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
780-1080
               

               
Cow position:
               
chr18:35085234-35084942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
781-910
               

               
Cow position:
               
chr18:19645436-19645567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
781-922
               

               
Cow position:
               
chr18:25626274-25626415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 118
               

               
Conread position:
               
781-1074
               

               
Cow position:
               
chr18:33522841-33523154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
78, 285
               

               
Conread position:
               
782-1080
               

               
Cow position:
               
chr18:16135047-16134734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
77, 184
               

               
Conread position:
               
783-1043
               

               
Cow position:
               
chr18:35637424-35637705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
785-1080
               

               
Cow position:
               
chr18:23656427-23656724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
786-1080
               

               
Cow position:
               
chr18:2864938-2864624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 281
               

               
Conread position:
               
790-923
               

               
Cow position:
               
chr18:30406745-30406615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
793-923
               

               
Cow position:
               
chr18:6829790-6829659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
797-923
               

               
Cow position:
               
chr18:45886963-45886837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
797-930
               

               
Cow position:
               
chr18:36444303-36444437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
797-1077
               

               
Cow position:
               
chr18:23618904-23619197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
797-1080
               

               
Cow position:
               
chr18:11368502-11368203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
62, 171
               

               
Conread position:
               
798-1030
               

               
Cow position:
               
chr18:24219337-24219577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 161
               

               
Conread position:
               
798-1059
               

               
Cow position:
               
chr18:8726322-8726602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
7, 188
               

               
Conread position:
               
798-1068
               

               
Cow position:
               
chr18:11655758-11656042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 254
               

               
Conread position:
               
798-1073
               

               
Cow position:
               
chr18:43284468-43284177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
799-922
               

               
Cow position:
               
chr18:19116180-19116055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
800-923
               

               
Cow position:
               
chr18:22181826-22181702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
800-1075
               

               
Cow position:
               
chr18:9089004-9089282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
63, 237
               

               
Conread position:
               
806-923
               

               
Cow position:
               
chr18:268762-268644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
806-923
               

               
Cow position:
               
chr18:31201663-31201781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
806-1078
               

               
Cow position:
               
chr18:26526975-26527241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
806-1080
               

               
Cow position:
               
chr18:32859936-32860224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
807-930
               

               
Cow position:
               
chr18:5451757-5451881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
808-924
               

               
Cow position:
               
chr18:10100742-10100859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
808-1080
               

               
Cow position:
               
chr18:1494582-1494870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 147
               

               
Conread position:
               
810-1077
               

               
Cow position:
               
chr18:36251999-36251738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
816-923
               

               
Cow position:
               
chr18:10890343-10890452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
816-1002
               

               
Cow position:
               
chr18:44541157-44540967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
817-1080
               

               
Cow position:
               
chr18:20226834-20226568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
824-1065
               

               
Cow position:
               
chr18:38464321-38464572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
824-1068
               

               
Cow position:
               
chr18:4432379-4432642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 241
               

               
Conread position:
               
824-1080
               

               
Cow position:
               
chr18:9975005-9974744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
827-1057
               

               
Cow position:
               
chr18:7930815-7930585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
834-1080
               

               
Cow position:
               
chr18:9804933-9805187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
837-1080
               

               
Cow position:
               
chr18:33605977-33606212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
838-1044
               

               
Cow position:
               
chr18:32245389-32245179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
850-1080
               

               
Cow position:
               
chr18:45904566-45904316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 217
               

               
Conread position:
               
859-1078
               

               
Cow position:
               
chr18:6465120-6464902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
90, 104
               

               
Conread position:
               
870-1077
               

               
Cow position:
               
chr18:15410171-15409959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
881-1080
               

               
Cow position:
               
chr18:52792034-52792225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
152, 5
               

               
Conread position:
               
915-1073
               

               
Cow position:
               
chr18:10082291-10082448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
920-1078
               

               
Cow position:
               
chr18:39455801-39455957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
113, 34
               

               
Conread position:
               
920-1078
               

               
Cow position:
               
chr18:51578740-51578581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
922-1078
               

               
Cow position:
               
chr18:19199607-19199764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
923-1068
               

               
Cow position:
               
chr18:37209948-37209804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
923-1072
               

               
Cow position:
               
chr18:641125-640978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
925-1079
               

               
Cow position:
               
chr18:42080246-42080093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
926-1030
               

               
Cow position:
               
chr18:39494544-39494647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
926-1041
               

               
Cow position:
               
chr18:21197978-21197863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1064
               

               
Cow position:
               
chr18:18860985-18861122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
926-1064
               

               
Cow position:
               
chr18:21738153-21738290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1065
               

               
Cow position:
               
chr18:31201804-31201942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1065
               

               
Cow position:
               
chr18:36224209-36224347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1065
               

               
Cow position:
               
chr18:56165425-56165563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1066
               

               
Cow position:
               
chr18:34020846-34020984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:5185616-5185475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:11251607-11251466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:17927572-17927713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:19462055-19462196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:20125736-20125877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:24678652-24678793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:24965576-24965719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:26485170-26485311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:26568355-26568496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:27529791-27529933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:27798377-27798236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:27995454-27995595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:30406592-30406451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:30677089-30677230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:31139524-31139665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:33616647-33616506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:34051189-34051048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:40059451-40059592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:40253226-40253085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:42421977-42421836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:42629139-42629280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:46873435-46873576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:51580010-51579869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:52574878-52575019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:52629483-52629342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr18:55417757-55417898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr18:10655885-10656029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr18:45572528-45572671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1072
               

               
Cow position:
               
chr18:50638034-50637889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr18:268621-268475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr18:6878199-6878053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr18:12118416-12118271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr18:20196080-20195934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr18:33157218-33157364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr18:37024130-37023982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr18:54059074-54058928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:21551387-21551240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:23802795-23802942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:27833652-27833504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:28292331-28292184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 10
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:28968514-28968367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:29585837-29585690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:29862833-29862687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:36512402-36512549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:41238301-41238447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr18:43430773-43430920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
926-1075
               

               
Cow position:
               
chr18:2609289-2609141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
926-1075
               

               
Cow position:
               
chr18:11779096-11779242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
926-1075
               

               
Cow position:
               
chr18:36770766-36770616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
25, 124
               

               
Conread position:
               
926-1076
               

               
Cow position:
               
chr18:13292936-13293085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
926-1076
               

               
Cow position:
               
chr18:14479891-14480039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
926-1077
               

               
Cow position:
               
chr18:9355839-9355689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
926-1077
               

               
Cow position:
               
chr18:15485173-15485025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
926-1077
               

               
Cow position:
               
chr18:37153659-37153509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 28
               

               
Conread position:
               
926-1077
               

               
Cow position:
               
chr18:44262043-44262193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr18:4579067-4578917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr18:10663121-10663272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr18:16148413-16148262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr18:18247881-18248032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr18:21609389-21609238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr18:29387664-29387816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 120
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr18:30231795-30231644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1079
               

               
Cow position:
               
chr18:31563169-31563018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1079
               

               
Cow position:
               
chr18:36122083-36121929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:727059-727214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:1663318-1663166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:1664503-1664351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:6047059-6046906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:7076198-7076351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:7359189-7359342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:7968554-7968705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:8967432-8967585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:9900325-9900478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:10097587-10097739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:10100881-10101033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:11190841-11190993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:20642050-20641897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:21304279-21304431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:25847596-25847442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:27457327-27457173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:28658481-28658327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:28793654-28793498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:29028577-29028423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:32121909-32121756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:33158297-33158449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:33608007-33608160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:33883510-33883356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:36233098-36232950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:37691168-37691015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:47579610-47579456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:52595824-52595977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr18:52899495-52899648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
927-1075
               

               
Cow position:
               
chr18:37492791-37492940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
927-1077
               

               
Cow position:
               
chr18:48392260-48392407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
927-1077
               

               
Cow position:
               
chr18:48527479-48527330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
927-1078
               

               
Cow position:
               
chr18:6834106-6833960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
927-1078
               

               
Cow position:
               
chr18:10112431-10112581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
927-1078
               

               
Cow position:
               
chr18:28530679-28530528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
927-1079
               

               
Cow position:
               
chr18:23682129-23681974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
927-1079
               

               
Cow position:
               
chr18:53962978-53962826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr18:81193-81344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr18:249456-249300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr18:23137790-23137635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr18:25972304-25972150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr18:29768340-29768489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
928-1073
               

               
Cow position:
               
chr18:45104997-45104853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
928-1076
               

               
Cow position:
               
chr18:33299337-33299486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
929-1078
               

               
Cow position:
               
chr18:49059131-49059278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
929-1080
               

               
Cow position:
               
chr18:36907750-36907593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
929-1080
               

               
Cow position:
               
chr18:36912276-36912119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
930-1079
               

               
Cow position:
               
chr18:11376797-11376945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
930-1080
               

               
Cow position:
               
chr18:6309492-6309639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
930-1080
               

               
Cow position:
               
chr18:30215993-30216142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 117
               

               
Conread position:
               
930-1080
               

               
Cow position:
               
chr18:35766202-35766356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
930-1080
               

               
Cow position:
               
chr18:38090158-38090004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
931-1071
               

               
Cow position:
               
chr18:6829631-6829492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
931-1071
               

               
Cow position:
               
chr18:43950273-43950411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
931-1077
               

               
Cow position:
               
chr18:33895593-33895740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
931-1080
               

               
Cow position:
               
chr18:33407071-33407219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
931-1080
               

               
Cow position:
               
chr18:33756323-33756472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
934-1077
               

               
Cow position:
               
chr18:10107130-10107272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
934-1078
               

               
Cow position:
               
chr18:43144943-43144798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
935-1080
               

               
Cow position:
               
chr18:35752214-35752069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
936-1072
               

               
Cow position:
               
chr18:19116020-19115885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
936-1072
               

               
Cow position:
               
chr18:48291442-48291306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 111
               

               
Conread position:
               
936-1077
               

               
Cow position:
               
chr18:54031142-54031282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
937-1080
               

               
Cow position:
               
chr18:14815903-14815760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
938-1075
               

               
Cow position:
               
chr18:11262403-11262539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 78
               

               
Conread position:
               
938-1080
               

               
Cow position:
               
chr18:16227007-16227148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
938-1080
               

               
Cow position:
               
chr18:25206857-25206716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
943-1071
               

               
Cow position:
               
chr18:22065922-22065795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
949-1080
               

               
Cow position:
               
chr18:23808396-23808264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
950-1077
               

               
Cow position:
               
chr18:18076177-18076044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
957-1074
               

               
Cow position:
               
chr18:29759176-29759293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 89
               

               
Conread position:
               
957-1074
               

               
Cow position:
               
chr18:37002093-37002210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
957-1075
               

               
Cow position:
               
chr18:13173068-13172950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
957-1080
               

               
Cow position:
               
chr18:23631120-23630997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
957-1080
               

               
Cow position:
               
chr18:48451132-48451255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 90
               

               
Conread position:
               
958-1073
               

               
Cow position:
               
chr18:39875831-39875717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
960-1078
               

               
Cow position:
               
chr18:28992504-28992387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
975-1077
               

               
Cow position:
               
chr18:33609711-33609813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
58, 71
               
Show alignments to all cow chromosomes.