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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8013E10.3
        

               
Conread position:
               
43-864
               

               
Cow position:
               
chr24:25439022-25439861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
130-390
               

               
Cow position:
               
chr24:38641053-38641322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 53
               

               
Conread position:
               
132-744
               

               
Cow position:
               
chr24:40121210-40120556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
132-752
               

               
Cow position:
               
chr24:15934818-15935483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
132-883
               

               
Cow position:
               
chr24:36779153-36779964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
132-917
               

               
Cow position:
               
chr24:16081604-16080747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 490
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr24:6326487-6325629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr24:32824208-32823393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 172
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr24:6412360-6413222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 569
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr24:9549149-9550002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 180
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr24:14352233-14353089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 172
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr24:17189390-17188529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr24:20367245-20368086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 332
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr24:29084783-29083921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 578
               

               
Conread position:
               
132-924
               

               
Cow position:
               
chr24:17764717-17763863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 171
               

               
Conread position:
               
132-924
               

               
Cow position:
               
chr24:39501713-39500872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 472
               

               
Conread position:
               
132-928
               

               
Cow position:
               
chr24:19643175-19644008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
583
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 191
               

               
Conread position:
               
132-928
               

               
Cow position:
               
chr24:37077000-37076176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 174
               

               
Conread position:
               
132-1068
               

               
Cow position:
               
chr24:3162351-3163378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1032
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 466
               

               
Conread position:
               
132-1074
               

               
Cow position:
               
chr24:19885173-19886141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
974
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 171
               

               
Conread position:
               
132-1074
               

               
Cow position:
               
chr24:29190171-29191197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1031
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 571
               

               
Conread position:
               
132-1080
               

               
Cow position:
               
chr24:22820592-22821581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1007
               

               
Alignm identity:
               
670
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 226
               

               
Conread position:
               
132-1080
               

               
Cow position:
               
chr24:38003148-38002146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1015
               

               
Alignm identity:
               
678
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
133-563
               

               
Cow position:
               
chr24:25648180-25647705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 360
               

               
Conread position:
               
133-922
               

               
Cow position:
               
chr24:18267608-18266750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
134-923
               

               
Cow position:
               
chr24:6068455-6067603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 461
               

               
Conread position:
               
134-928
               

               
Cow position:
               
chr24:19674714-19675559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
590
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
136-923
               

               
Cow position:
               
chr24:16647016-16646201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 176
               

               
Conread position:
               
136-924
               

               
Cow position:
               
chr24:12570798-12571654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
136-1020
               

               
Cow position:
               
chr24:14745249-14746200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
958
               

               
Alignm identity:
               
628
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 524
               

               
Conread position:
               
140-1068
               

               
Cow position:
               
chr24:20284317-20283304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1021
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
143-1068
               

               
Cow position:
               
chr24:22794452-22795463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1018
               

               
Alignm identity:
               
655
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 519
               

               
Conread position:
               
152-738
               

               
Cow position:
               
chr24:36721347-36721985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
152-925
               

               
Cow position:
               
chr24:6666877-6666057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
843
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 354
               

               
Conread position:
               
157-1072
               

               
Cow position:
               
chr24:9177072-9176112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
980
               

               
Alignm identity:
               
622
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
159-1080
               

               
Cow position:
               
chr24:31381319-31382286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
987
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
198-737
               

               
Cow position:
               
chr24:6052043-6052612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 383
               

               
Conread position:
               
198-923
               

               
Cow position:
               
chr24:1841912-1841127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 495
               

               
Conread position:
               
202-729
               

               
Cow position:
               
chr24:14147199-14146637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 376
               

               
Conread position:
               
202-920
               

               
Cow position:
               
chr24:26274647-26273912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 20
               

               
Conread position:
               
202-922
               

               
Cow position:
               
chr24:15296079-15296858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 495
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr24:6021114-6020335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 495
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr24:18112421-18113199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr24:28688407-28689141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr24:40271831-40272586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
202-928
               

               
Cow position:
               
chr24:16266424-16267192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 266
               

               
Conread position:
               
202-928
               

               
Cow position:
               
chr24:41005443-41006221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
202-930
               

               
Cow position:
               
chr24:40467452-40466662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 104
               

               
Conread position:
               
202-1043
               

               
Cow position:
               
chr24:31068082-31067171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
922
               

               
Alignm identity:
               
601
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
202-1080
               

               
Cow position:
               
chr24:14914853-14913954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
914
               

               
Alignm identity:
               
586
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
203-777
               

               
Cow position:
               
chr24:9089119-9088545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
203-922
               

               
Cow position:
               
chr24:14376674-14375918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
203-922
               

               
Cow position:
               
chr24:31301670-31302428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 357
               

               
Conread position:
               
203-1077
               

               
Cow position:
               
chr24:37318575-37317673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
933
               

               
Alignm identity:
               
593
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
211-1080
               

               
Cow position:
               
chr24:16056880-16055949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
942
               

               
Alignm identity:
               
616
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
218-923
               

               
Cow position:
               
chr24:7597579-7596819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 73
               

               
Conread position:
               
219-849
               

               
Cow position:
               
chr24:5775148-5774491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
219-923
               

               
Cow position:
               
chr24:11208626-11207863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 478
               

               
Conread position:
               
231-928
               

               
Cow position:
               
chr24:33575256-33576009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 280
               

               
Conread position:
               
236-1080
               

               
Cow position:
               
chr24:22287580-22288448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
896
               

               
Alignm identity:
               
595
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
238-1041
               

               
Cow position:
               
chr24:17998330-17999182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
593
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
267-664
               

               
Cow position:
               
chr24:25284807-25285225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 196
               

               
Conread position:
               
288-751
               

               
Cow position:
               
chr24:17296080-17295606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
387-743
               

               
Cow position:
               
chr24:42250332-42249969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
51, 196
               

               
Conread position:
               
387-923
               

               
Cow position:
               
chr24:22974982-22975553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
52, 153
               

               
Conread position:
               
389-848
               

               
Cow position:
               
chr24:36478622-36478130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 196
               

               
Conread position:
               
389-925
               

               
Cow position:
               
chr24:38813820-38814388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
389-928
               

               
Cow position:
               
chr24:27230147-27229587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
389-1068
               

               
Cow position:
               
chr24:43634294-43635009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
389-1073
               

               
Cow position:
               
chr24:28601849-28601149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 233
               

               
Conread position:
               
390-679
               

               
Cow position:
               
chr24:31648818-31648514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 209
               

               
Conread position:
               
390-747
               

               
Cow position:
               
chr24:9861595-9861228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
390-848
               

               
Cow position:
               
chr24:37886520-37887005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 214
               

               
Conread position:
               
390-888
               

               
Cow position:
               
chr24:42386241-42385721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
390-905
               

               
Cow position:
               
chr24:39956925-39956384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 223
               

               
Conread position:
               
390-918
               

               
Cow position:
               
chr24:44912046-44912587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
390-919
               

               
Cow position:
               
chr24:3793660-3794222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 317
               

               
Conread position:
               
390-919
               

               
Cow position:
               
chr24:32849317-32849870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 280
               

               
Conread position:
               
390-922
               

               
Cow position:
               
chr24:7576643-7576090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 208
               

               
Conread position:
               
390-922
               

               
Cow position:
               
chr24:17161801-17161235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 282
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr24:3850772-3851339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 196
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr24:5928956-5929522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 330
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr24:6036004-6035436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 282
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr24:20603926-20604492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 282
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr24:22047890-22047330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 280
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr24:26412228-26412790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr24:30681945-30681389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 137
               

               
Conread position:
               
390-924
               

               
Cow position:
               
chr24:7467120-7466579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
390-924
               

               
Cow position:
               
chr24:20507871-20507303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
390-924
               

               
Cow position:
               
chr24:29370416-29369852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 259
               

               
Conread position:
               
390-925
               

               
Cow position:
               
chr24:10879728-10880271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 200
               

               
Conread position:
               
390-925
               

               
Cow position:
               
chr24:22911851-22912409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
390-925
               

               
Cow position:
               
chr24:33775292-33774770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
390-928
               

               
Cow position:
               
chr24:35503789-35503237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
57, 194
               

               
Conread position:
               
390-1068
               

               
Cow position:
               
chr24:16298008-16297326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 54
               

               
Conread position:
               
390-1073
               

               
Cow position:
               
chr24:34760707-34761420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
390-1074
               

               
Cow position:
               
chr24:35067598-35066880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
390-1080
               

               
Cow position:
               
chr24:42815830-42816563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
391-922
               

               
Cow position:
               
chr24:17566030-17566588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
391-922
               

               
Cow position:
               
chr24:32740731-32740186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
391-923
               

               
Cow position:
               
chr24:36028336-36027771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
391-924
               

               
Cow position:
               
chr24:12038695-12039257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 225
               

               
Conread position:
               
391-1059
               

               
Cow position:
               
chr24:12090158-12090870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
48, 281
               

               
Conread position:
               
391-1065
               

               
Cow position:
               
chr24:19322363-19321670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
393-1042
               

               
Cow position:
               
chr24:37197536-37196842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
393-1072
               

               
Cow position:
               
chr24:5863173-5862443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 158
               

               
Conread position:
               
394-896
               

               
Cow position:
               
chr24:38716454-38715953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
394-922
               

               
Cow position:
               
chr24:45086709-45087267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
394-923
               

               
Cow position:
               
chr24:5991002-5990444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
394-923
               

               
Cow position:
               
chr24:13235450-13236010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
42, 190
               

               
Conread position:
               
394-923
               

               
Cow position:
               
chr24:25372284-25372846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 232
               

               
Conread position:
               
394-928
               

               
Cow position:
               
chr24:42938776-42938216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 219
               

               
Conread position:
               
394-1073
               

               
Cow position:
               
chr24:28497952-28497242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
394-1074
               

               
Cow position:
               
chr24:7748807-7749531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
395-744
               

               
Cow position:
               
chr24:38641560-38641916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
395-1074
               

               
Cow position:
               
chr24:23052706-23051988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
396-923
               

               
Cow position:
               
chr24:13491679-13492239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 227
               

               
Conread position:
               
396-1080
               

               
Cow position:
               
chr24:16402201-16401511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
398-919
               

               
Cow position:
               
chr24:12332522-12331967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
41, 210
               

               
Conread position:
               
400-752
               

               
Cow position:
               
chr24:29391568-29391207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
400-1040
               

               
Cow position:
               
chr24:36563090-36562423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
401-925
               

               
Cow position:
               
chr24:6271327-6271857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 127
               

               
Conread position:
               
401-1080
               

               
Cow position:
               
chr24:26847415-26846695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
405-922
               

               
Cow position:
               
chr24:32608503-32609050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 144
               

               
Conread position:
               
405-923
               

               
Cow position:
               
chr24:11104960-11104408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 221
               

               
Conread position:
               
407-910
               

               
Cow position:
               
chr24:31356796-31357316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 190
               

               
Conread position:
               
408-923
               

               
Cow position:
               
chr24:36307783-36308320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 7
               

               
Conread position:
               
410-923
               

               
Cow position:
               
chr24:40428497-40427950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
410-1059
               

               
Cow position:
               
chr24:37857478-37856775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 243
               

               
Conread position:
               
414-922
               

               
Cow position:
               
chr24:10244346-10243819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
414-923
               

               
Cow position:
               
chr24:12696914-12696380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
418-911
               

               
Cow position:
               
chr24:39676705-39676193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
418-925
               

               
Cow position:
               
chr24:14336075-14336596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
426-923
               

               
Cow position:
               
chr24:38296275-38296800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
88, 140
               

               
Conread position:
               
434-922
               

               
Cow position:
               
chr24:6415392-6415905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
438-928
               

               
Cow position:
               
chr24:16601318-16600796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
444-896
               

               
Cow position:
               
chr24:29395115-29394650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
132, 69
               

               
Conread position:
               
444-923
               

               
Cow position:
               
chr24:14250346-14249839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
91, 158
               

               
Conread position:
               
444-923
               

               
Cow position:
               
chr24:40519365-40518869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
444-925
               

               
Cow position:
               
chr24:5910044-5910564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
80, 262
               

               
Conread position:
               
444-1019
               

               
Cow position:
               
chr24:40252876-40253489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
444-1068
               

               
Cow position:
               
chr24:207755-207098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
446-1073
               

               
Cow position:
               
chr24:29179605-29180259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 191
               

               
Conread position:
               
450-854
               

               
Cow position:
               
chr24:27587020-27587428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
65, 146
               

               
Conread position:
               
450-923
               

               
Cow position:
               
chr24:11462768-11462270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
74, 252
               

               
Conread position:
               
450-928
               

               
Cow position:
               
chr24:34319208-34319708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
450-1077
               

               
Cow position:
               
chr24:6055270-6054627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 146
               

               
Conread position:
               
460-750
               

               
Cow position:
               
chr24:29888719-29888424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 125
               

               
Conread position:
               
460-853
               

               
Cow position:
               
chr24:16474559-16474977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
460-911
               

               
Cow position:
               
chr24:21999176-21998709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
460-919
               

               
Cow position:
               
chr24:40036701-40036214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
460-923
               

               
Cow position:
               
chr24:9900624-9901115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 206
               

               
Conread position:
               
462-857
               

               
Cow position:
               
chr24:28336802-28336387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
62, 145
               

               
Conread position:
               
464-1077
               

               
Cow position:
               
chr24:41199990-41200599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 78
               

               
Conread position:
               
472-922
               

               
Cow position:
               
chr24:45009452-45009927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 173
               

               
Conread position:
               
479-1043
               

               
Cow position:
               
chr24:30893592-30893002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 183
               

               
Conread position:
               
500-1032
               

               
Cow position:
               
chr24:36710135-36710695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
510-1080
               

               
Cow position:
               
chr24:25677023-25677616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
521-1077
               

               
Cow position:
               
chr24:41054536-41055106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
525-1077
               

               
Cow position:
               
chr24:27761392-27761970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
540-922
               

               
Cow position:
               
chr24:43842237-43842627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
91, 102
               

               
Conread position:
               
541-1046
               

               
Cow position:
               
chr24:6507580-6507061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
545-1080
               

               
Cow position:
               
chr24:39482517-39483091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
180, 49
               

               
Conread position:
               
546-926
               

               
Cow position:
               
chr24:14945691-14946071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
546-939
               

               
Cow position:
               
chr24:40102356-40102758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
546-1076
               

               
Cow position:
               
chr24:21058772-21059347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 111
               

               
Conread position:
               
548-930
               

               
Cow position:
               
chr24:39067521-39067117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
554-1080
               

               
Cow position:
               
chr24:23486031-23486581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
558-925
               

               
Cow position:
               
chr24:13299453-13299063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
50, 263
               

               
Conread position:
               
561-931
               

               
Cow position:
               
chr24:16651736-16652113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
565-923
               

               
Cow position:
               
chr24:36268438-36268062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 6
               

               
Conread position:
               
566-923
               

               
Cow position:
               
chr24:33640130-33639754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
74, 5
               

               
Conread position:
               
566-1064
               

               
Cow position:
               
chr24:6442806-6443340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
74, 5
               

               
Conread position:
               
571-928
               

               
Cow position:
               
chr24:40896869-40896490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
571-1073
               

               
Cow position:
               
chr24:44363968-44363467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
571-1078
               

               
Cow position:
               
chr24:32304039-32303521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
571-1080
               

               
Cow position:
               
chr24:31125515-31126048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
576-1039
               

               
Cow position:
               
chr24:42944288-42943799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 108
               

               
Conread position:
               
576-1080
               

               
Cow position:
               
chr24:31758916-31758383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 83
               

               
Conread position:
               
578-1080
               

               
Cow position:
               
chr24:25992075-25991574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
579-925
               

               
Cow position:
               
chr24:27684351-27684026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 6
               

               
Conread position:
               
581-1074
               

               
Cow position:
               
chr24:144972-144437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
583-923
               

               
Cow position:
               
chr24:11940145-11940505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
585-923
               

               
Cow position:
               
chr24:10035658-10035300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-923
               

               
Cow position:
               
chr24:11081394-11081039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
585-923
               

               
Cow position:
               
chr24:12446880-12447235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
585-923
               

               
Cow position:
               
chr24:18740983-18740625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-923
               

               
Cow position:
               
chr24:27345510-27345152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-1074
               

               
Cow position:
               
chr24:17544558-17544049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-1074
               

               
Cow position:
               
chr24:30870583-30870060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-1080
               

               
Cow position:
               
chr24:27959667-27959169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
68, 106
               

               
Conread position:
               
589-922
               

               
Cow position:
               
chr24:19466860-19466518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
589-922
               

               
Cow position:
               
chr24:32359756-32359403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
589-1043
               

               
Cow position:
               
chr24:19040760-19040292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
591-1076
               

               
Cow position:
               
chr24:31050348-31050838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
592-1072
               

               
Cow position:
               
chr24:17752853-17752339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
16, 20
               

               
Conread position:
               
593-1080
               

               
Cow position:
               
chr24:31815656-31816143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 43
               

               
Conread position:
               
595-1080
               

               
Cow position:
               
chr24:25424087-25424598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
596-1078
               

               
Cow position:
               
chr24:37081317-37080799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
604-1004
               

               
Cow position:
               
chr24:6183497-6183882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
608-1077
               

               
Cow position:
               
chr24:38677954-38678417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
611-911
               

               
Cow position:
               
chr24:29071991-29071688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
611-1068
               

               
Cow position:
               
chr24:19706650-19707130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
617-919
               

               
Cow position:
               
chr24:15880555-15880874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
6, 42
               

               
Conread position:
               
620-923
               

               
Cow position:
               
chr24:31370867-31370549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
629-923
               

               
Cow position:
               
chr24:7031058-7030738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
634-922
               

               
Cow position:
               
chr24:36219870-36219589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
634-1080
               

               
Cow position:
               
chr24:40445107-40445560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
97, 6
               

               
Conread position:
               
643-908
               

               
Cow position:
               
chr24:10697658-10697397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
644-925
               

               
Cow position:
               
chr24:19509943-19509651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
661-928
               

               
Cow position:
               
chr24:42917412-42917136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
672-922
               

               
Cow position:
               
chr24:33239404-33239140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
675-1059
               

               
Cow position:
               
chr24:16996059-16996477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
676-1066
               

               
Cow position:
               
chr24:16863078-16863493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
681-1057
               

               
Cow position:
               
chr24:7088463-7088069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
709-899
               

               
Cow position:
               
chr24:8885552-8885353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
717-925
               

               
Cow position:
               
chr24:30018583-30018373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
717-1080
               

               
Cow position:
               
chr24:35837265-35836881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
718-1078
               

               
Cow position:
               
chr24:34602720-34603081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
723-944
               

               
Cow position:
               
chr24:2731331-2731109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
725-925
               

               
Cow position:
               
chr24:36726770-36726980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
729-1080
               

               
Cow position:
               
chr24:37387151-37386775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
731-908
               

               
Cow position:
               
chr24:20974180-20973999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
735-1078
               

               
Cow position:
               
chr24:10260142-10259785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
737-1080
               

               
Cow position:
               
chr24:40637972-40638333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
739-922
               

               
Cow position:
               
chr24:6414336-6414150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
739-923
               

               
Cow position:
               
chr24:43906417-43906602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
739-924
               

               
Cow position:
               
chr24:2300000-2300188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
744-934
               

               
Cow position:
               
chr24:27627521-27627327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
744-941
               

               
Cow position:
               
chr24:23161033-23161229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
747-1068
               

               
Cow position:
               
chr24:33291925-33291596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 213
               

               
Conread position:
               
751-909
               

               
Cow position:
               
chr24:28486177-28486015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
755-908
               

               
Cow position:
               
chr24:13511455-13511297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
759-928
               

               
Cow position:
               
chr24:25269751-25269580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
763-907
               

               
Cow position:
               
chr24:573571-573423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
766-1067
               

               
Cow position:
               
chr24:25229807-25229507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
767-923
               

               
Cow position:
               
chr24:16475132-16475287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
771-905
               

               
Cow position:
               
chr24:12942838-12942972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 96
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr24:25245296-25245445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr24:39441526-39441379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
771-923
               

               
Cow position:
               
chr24:6148867-6149020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-923
               

               
Cow position:
               
chr24:25110838-25110989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 112
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr24:32759529-32759375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-925
               

               
Cow position:
               
chr24:16561268-16561113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-928
               

               
Cow position:
               
chr24:37481054-37480895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
771-928
               

               
Cow position:
               
chr24:44989367-44989208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
771-1056
               

               
Cow position:
               
chr24:11876142-11876448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
88, 297
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr24:15692000-15692329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 204
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr24:15918979-15919296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 185
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr24:16908903-16909219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 186
               

               
Conread position:
               
772-896
               

               
Cow position:
               
chr24:16189777-16189901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
775-1036
               

               
Cow position:
               
chr24:2597956-2598226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 147
               

               
Conread position:
               
775-1059
               

               
Cow position:
               
chr24:24627035-24626740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
775-1078
               

               
Cow position:
               
chr24:6342634-6342943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
776-923
               

               
Cow position:
               
chr24:17455643-17455791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
776-1074
               

               
Cow position:
               
chr24:40493306-40493613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 173
               

               
Conread position:
               
776-1076
               

               
Cow position:
               
chr24:7138281-7138583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
777-1080
               

               
Cow position:
               
chr24:17412018-17412335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
777-1080
               

               
Cow position:
               
chr24:27905703-27906017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 221
               

               
Conread position:
               
778-919
               

               
Cow position:
               
chr24:12293290-12293432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-919
               

               
Cow position:
               
chr24:14378903-14378761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
778-919
               

               
Cow position:
               
chr24:33053414-33053272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-922
               

               
Cow position:
               
chr24:11748512-11748367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-922
               

               
Cow position:
               
chr24:13319857-13319712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-922
               

               
Cow position:
               
chr24:38487857-38488002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:2118468-2118614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:8754113-8754259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:9045099-9044953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:11215790-11215644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:13496898-13497044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:13542590-13542444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:15084177-15084323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:16654407-16654261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:26795014-26795160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:34270790-34270932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr24:40382240-40382094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-1031
               

               
Cow position:
               
chr24:38291439-38291698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 182
               

               
Conread position:
               
778-1062
               

               
Cow position:
               
chr24:35872627-35872355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 60
               

               
Conread position:
               
778-1068
               

               
Cow position:
               
chr24:12377517-12377209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
778-1068
               

               
Cow position:
               
chr24:12577294-12577588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
778-1068
               

               
Cow position:
               
chr24:17720822-17720513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-1080
               

               
Cow position:
               
chr24:24249991-24250313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
81, 291
               

               
Conread position:
               
779-967
               

               
Cow position:
               
chr24:11412792-11412979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 147
               

               
Conread position:
               
779-1074
               

               
Cow position:
               
chr24:27632664-27632972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 185
               

               
Conread position:
               
781-922
               

               
Cow position:
               
chr24:14760500-14760642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
781-923
               

               
Cow position:
               
chr24:24818994-24818851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
781-1078
               

               
Cow position:
               
chr24:41487474-41487770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
785-1080
               

               
Cow position:
               
chr24:6230473-6230773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 87
               

               
Conread position:
               
786-924
               

               
Cow position:
               
chr24:5850133-5849994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
786-1074
               

               
Cow position:
               
chr24:44877127-44877414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
787-1068
               

               
Cow position:
               
chr24:4666688-4666988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
72, 278
               

               
Conread position:
               
791-923
               

               
Cow position:
               
chr24:11311913-11311781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
797-923
               

               
Cow position:
               
chr24:14146258-14146131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
797-932
               

               
Cow position:
               
chr24:26173876-26173740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
797-1019
               

               
Cow position:
               
chr24:29170277-29170517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
800-1032
               

               
Cow position:
               
chr24:29899054-29898817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
800-1059
               

               
Cow position:
               
chr24:2263783-2264040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
800-1080
               

               
Cow position:
               
chr24:15372408-15372708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 170
               

               
Conread position:
               
805-922
               

               
Cow position:
               
chr24:39498856-39498973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
806-923
               

               
Cow position:
               
chr24:14193933-14193815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
806-923
               

               
Cow position:
               
chr24:40789969-40789851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
806-925
               

               
Cow position:
               
chr24:33035727-33035607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
806-1080
               

               
Cow position:
               
chr24:8886195-8886471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
806-1080
               

               
Cow position:
               
chr24:32205480-32205214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
806-1080
               

               
Cow position:
               
chr24:37036909-37037203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
808-919
               

               
Cow position:
               
chr24:35793476-35793588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
808-1078
               

               
Cow position:
               
chr24:37574741-37574460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
52, 155
               

               
Conread position:
               
810-1043
               

               
Cow position:
               
chr24:33188255-33188490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 142
               

               
Conread position:
               
811-923
               

               
Cow position:
               
chr24:35877630-35877517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
812-936
               

               
Cow position:
               
chr24:5379132-5379255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
813-1035
               

               
Cow position:
               
chr24:11734045-11734273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
813-1080
               

               
Cow position:
               
chr24:19782419-19782699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
35, 151
               

               
Conread position:
               
824-923
               

               
Cow position:
               
chr24:25710395-25710295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
824-923
               

               
Cow position:
               
chr24:28494387-28494487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
824-923
               

               
Cow position:
               
chr24:36106063-36105963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
824-1080
               

               
Cow position:
               
chr24:43733100-43733367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
827-923
               

               
Cow position:
               
chr24:17865124-17865027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
850-1068
               

               
Cow position:
               
chr24:27153979-27153745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
851-1040
               

               
Cow position:
               
chr24:29033172-29033377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
866-1040
               

               
Cow position:
               
chr24:30514396-30514586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
870-1074
               

               
Cow position:
               
chr24:36780116-36780330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 186
               

               
Conread position:
               
918-1079
               

               
Cow position:
               
chr24:29759794-29759954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
923-1074
               

               
Cow position:
               
chr24:12146826-12146675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
923-1079
               

               
Cow position:
               
chr24:17834011-17833861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
923-1080
               

               
Cow position:
               
chr24:36345427-36345271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
925-1058
               

               
Cow position:
               
chr24:35568612-35568743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
925-1078
               

               
Cow position:
               
chr24:37434463-37434311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
925-1080
               

               
Cow position:
               
chr24:30115534-30115687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
925-1080
               

               
Cow position:
               
chr24:41333455-41333301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
926-1029
               

               
Cow position:
               
chr24:11327111-11327214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
926-1044
               

               
Cow position:
               
chr24:11886600-11886718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1065
               

               
Cow position:
               
chr24:39913852-39913989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:4637653-4637512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:4649510-4649370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:7596796-7596655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:7986449-7986308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:8754282-8754423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:9044930-9044789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:9366034-9365893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:9550025-9550166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:10035277-10035136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:11207840-11207699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:12518580-12518721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:12696357-12696216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:13497067-13497208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:13542421-13542280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:15084346-15084487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:17161211-17161070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:17455814-17455955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:17566612-17566753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:17865004-17864863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:18113222-18113364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 120
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:18234541-18234682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:18740602-18740461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:19331354-19331495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:21211151-21211010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:24818828-24818688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:26795183-26795324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:29097706-29097565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:38296823-38296964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:39217189-39217048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:40789828-40789687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr24:42693972-42693831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr24:16557217-16557074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr24:36555392-36555248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1072
               

               
Cow position:
               
chr24:18266726-18266583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
926-1072
               

               
Cow position:
               
chr24:30484497-30484353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
926-1072
               

               
Cow position:
               
chr24:40497965-40497820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr24:11118723-11118869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr24:12202741-12202597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr24:14173017-14172872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr24:17406835-17406978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr24:22193162-22193308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr24:28062385-28062529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 5
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr24:41063224-41063369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr24:5910586-5910734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr24:19679308-19679455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr24:19815647-19815501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr24:27290313-27290459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr24:32361092-32360944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr24:35823161-35823014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
926-1075
               

               
Cow position:
               
chr24:6524911-6525059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1077
               

               
Cow position:
               
chr24:13373741-13373591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1077
               

               
Cow position:
               
chr24:16558247-16558097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr24:12264260-12264111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr24:42387190-42387338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr24:44989190-44989039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:4616310-4616157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:5652529-5652376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:6149472-6149622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:6341598-6341755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:6415929-6416081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:10243795-10243641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:15666972-15666821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:15935703-15935856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:18374229-18374382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:25245470-25245621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:27608697-27608553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:29130784-29130631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:29388624-29388773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:29845827-29845678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:31770245-31770399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:32070098-32070251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:33239116-33238961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:33526953-33526793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr24:39955851-39955697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
927-1068
               

               
Cow position:
               
chr24:6019203-6019063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
927-1073
               

               
Cow position:
               
chr24:32759352-32759209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
927-1077
               

               
Cow position:
               
chr24:19324037-19323890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
927-1077
               

               
Cow position:
               
chr24:33576044-33576197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
927-1077
               

               
Cow position:
               
chr24:33774747-33774598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr24:6102183-6102335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr24:13784098-13783946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr24:17364213-17364062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr24:28911162-28911313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr24:32823366-32823214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
928-1076
               

               
Cow position:
               
chr24:20507279-20507136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
928-1080
               

               
Cow position:
               
chr24:5849973-5849824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
928-1080
               

               
Cow position:
               
chr24:28303911-28303761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
929-1080
               

               
Cow position:
               
chr24:40771557-40771708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
930-1077
               

               
Cow position:
               
chr24:30262764-30262908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
930-1078
               

               
Cow position:
               
chr24:16483090-16482943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
930-1080
               

               
Cow position:
               
chr24:25269558-25269410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
932-1080
               

               
Cow position:
               
chr24:40056280-40056130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
933-1080
               

               
Cow position:
               
chr24:11006654-11006802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 115
               

               
Conread position:
               
936-1044
               

               
Cow position:
               
chr24:27845074-27844966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
936-1073
               

               
Cow position:
               
chr24:32693152-32693287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
936-1078
               

               
Cow position:
               
chr24:17030133-17029992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
936-1080
               

               
Cow position:
               
chr24:21094364-21094222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
939-1065
               

               
Cow position:
               
chr24:45004377-45004503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
939-1077
               

               
Cow position:
               
chr24:34329095-34329233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
94, 107
               

               
Conread position:
               
940-1080
               

               
Cow position:
               
chr24:16844886-16844747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 105
               

               
Conread position:
               
941-1073
               

               
Cow position:
               
chr24:16897395-16897263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
957-1063
               

               
Cow position:
               
chr24:27564243-27564137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 90
               

               
Conread position:
               
957-1080
               

               
Cow position:
               
chr24:33943868-33943989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
962-1080
               

               
Cow position:
               
chr24:7001597-7001479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 85
               
Show alignments to all cow chromosomes.