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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8013E10.3
        

               
Conread position:
               
132-726
               

               
Cow position:
               
chr27:17567890-17568531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
132-744
               

               
Cow position:
               
chr27:1535974-1536621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 168
               

               
Conread position:
               
132-888
               

               
Cow position:
               
chr27:15405439-15406237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 170
               

               
Conread position:
               
132-907
               

               
Cow position:
               
chr27:4982162-4982996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
839
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr27:166129-165270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
132-922
               

               
Cow position:
               
chr27:15273283-15272426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 537
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr27:1082373-1081525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 549
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr27:1520470-1521331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
49, 528
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr27:3232741-3231886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 168
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr27:8960239-8959365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
38, 590
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr27:16031607-16030746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 577
               

               
Conread position:
               
132-923
               

               
Cow position:
               
chr27:27291184-27292045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
132-931
               

               
Cow position:
               
chr27:27501022-27501846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 234
               

               
Conread position:
               
132-1030
               

               
Cow position:
               
chr27:12262656-12261766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
936
               

               
Alignm identity:
               
603
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
132-1068
               

               
Cow position:
               
chr27:10578736-10579759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1027
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 578
               

               
Conread position:
               
132-1068
               

               
Cow position:
               
chr27:14297006-14298005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1008
               

               
Alignm identity:
               
642
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
132-1072
               

               
Cow position:
               
chr27:21451233-21452271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1043
               

               
Alignm identity:
               
672
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 608
               

               
Conread position:
               
132-1074
               

               
Cow position:
               
chr27:4331950-4330930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1028
               

               
Alignm identity:
               
648
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 171
               

               
Conread position:
               
132-1074
               

               
Cow position:
               
chr27:5991250-5990230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1028
               

               
Alignm identity:
               
633
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 123
               

               
Conread position:
               
132-1080
               

               
Cow position:
               
chr27:16427469-16428484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1034
               

               
Alignm identity:
               
695
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
132-1080
               

               
Cow position:
               
chr27:31268019-31269033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1027
               

               
Alignm identity:
               
676
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 168
               

               
Conread position:
               
133-922
               

               
Cow position:
               
chr27:25801414-25800560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
48, 170
               

               
Conread position:
               
138-1077
               

               
Cow position:
               
chr27:9255340-9254322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1028
               

               
Alignm identity:
               
676
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
140-1044
               

               
Cow position:
               
chr27:27235308-27234372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
966
               

               
Alignm identity:
               
622
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 310
               

               
Conread position:
               
152-393
               

               
Cow position:
               
chr27:26855877-26856128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 140
               

               
Conread position:
               
166-883
               

               
Cow position:
               
chr27:31249076-31249826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
191-923
               

               
Cow position:
               
chr27:20810280-20811068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
202-486
               

               
Cow position:
               
chr27:16582594-16582303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
202-642
               

               
Cow position:
               
chr27:27742071-27742540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 193
               

               
Conread position:
               
202-919
               

               
Cow position:
               
chr27:13353182-13353953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr27:2000717-2001496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 88
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr27:29036497-29035730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 482
               

               
Conread position:
               
202-923
               

               
Cow position:
               
chr27:29447204-29446453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
88, 547
               

               
Conread position:
               
202-930
               

               
Cow position:
               
chr27:19523836-19523051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 89
               

               
Conread position:
               
202-1033
               

               
Cow position:
               
chr27:8336054-8335175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
893
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
202-1080
               

               
Cow position:
               
chr27:26784694-26785639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
954
               

               
Alignm identity:
               
624
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 381
               

               
Conread position:
               
203-1077
               

               
Cow position:
               
chr27:8726456-8727417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
972
               

               
Alignm identity:
               
646
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
207-909
               

               
Cow position:
               
chr27:1501437-1502131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
209-873
               

               
Cow position:
               
chr27:27556687-27557400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
233-1005
               

               
Cow position:
               
chr27:26552445-26551645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
203, 58
               

               
Conread position:
               
238-922
               

               
Cow position:
               
chr27:2558083-2557343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
256-1080
               

               
Cow position:
               
chr27:11434102-11434988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
900
               

               
Alignm identity:
               
580
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
265-729
               

               
Cow position:
               
chr27:27930160-27930635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
283-923
               

               
Cow position:
               
chr27:17404057-17403415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
389-919
               

               
Cow position:
               
chr27:17864096-17864625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 42
               

               
Conread position:
               
389-923
               

               
Cow position:
               
chr27:12277195-12277758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 195
               

               
Conread position:
               
389-1065
               

               
Cow position:
               
chr27:30307184-30306464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
390-651
               

               
Cow position:
               
chr27:24562576-24562322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
390-721
               

               
Cow position:
               
chr27:27278809-27279145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
390-756
               

               
Cow position:
               
chr27:25964873-25964491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 234
               

               
Conread position:
               
390-854
               

               
Cow position:
               
chr27:25875057-25875535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 282
               

               
Conread position:
               
390-922
               

               
Cow position:
               
chr27:19932481-19931906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 292
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr27:3653615-3653048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 282
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr27:11481016-11481583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 282
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr27:12006233-12006800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 282
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr27:15033806-15033240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 282
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr27:15348747-15349287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
49, 179
               

               
Conread position:
               
390-923
               

               
Cow position:
               
chr27:22797572-22797007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 280
               

               
Conread position:
               
390-925
               

               
Cow position:
               
chr27:5268455-5269000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
390-966
               

               
Cow position:
               
chr27:4804873-4805474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
51, 192
               

               
Conread position:
               
390-998
               

               
Cow position:
               
chr27:3994220-3993614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
390-1059
               

               
Cow position:
               
chr27:26654352-26653674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
390-1074
               

               
Cow position:
               
chr27:1188751-1189464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 205
               

               
Conread position:
               
390-1074
               

               
Cow position:
               
chr27:8201023-8201758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 169
               

               
Conread position:
               
390-1077
               

               
Cow position:
               
chr27:18954135-18954859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
390-1080
               

               
Cow position:
               
chr27:12281782-12282504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
390-1080
               

               
Cow position:
               
chr27:21284146-21283423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
391-710
               

               
Cow position:
               
chr27:28895095-28895419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
391-919
               

               
Cow position:
               
chr27:15872233-15871684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
391-1074
               

               
Cow position:
               
chr27:13183177-13182479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
110, 55
               

               
Conread position:
               
391-1080
               

               
Cow position:
               
chr27:17565548-17564842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 172
               

               
Conread position:
               
392-1080
               

               
Cow position:
               
chr27:9263189-9262451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
394-889
               

               
Cow position:
               
chr27:17050362-17049832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
394-919
               

               
Cow position:
               
chr27:11489731-11490268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
394-1027
               

               
Cow position:
               
chr27:3751329-3751975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 117
               

               
Conread position:
               
394-1071
               

               
Cow position:
               
chr27:344834-344114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
394-1075
               

               
Cow position:
               
chr27:8297570-8296857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
397-1080
               

               
Cow position:
               
chr27:25884923-25885624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
401-752
               

               
Cow position:
               
chr27:910484-910848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 159
               

               
Conread position:
               
403-922
               

               
Cow position:
               
chr27:11256567-11256036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 114
               

               
Conread position:
               
404-1080
               

               
Cow position:
               
chr27:4665507-4664819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
406-676
               

               
Cow position:
               
chr27:16627460-16627741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 202
               

               
Conread position:
               
412-726
               

               
Cow position:
               
chr27:29045745-29046067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 242
               

               
Conread position:
               
414-779
               

               
Cow position:
               
chr27:30449211-30448845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 170
               

               
Conread position:
               
438-921
               

               
Cow position:
               
chr27:31547397-31546899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
439-925
               

               
Cow position:
               
chr27:3729300-3729792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 99
               

               
Conread position:
               
439-1073
               

               
Cow position:
               
chr27:10670199-10670850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 6
               

               
Conread position:
               
443-919
               

               
Cow position:
               
chr27:2331647-2332148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 223
               

               
Conread position:
               
444-716
               

               
Cow position:
               
chr27:5632523-5632805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
444-783
               

               
Cow position:
               
chr27:21392157-21392499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 171
               

               
Conread position:
               
444-788
               

               
Cow position:
               
chr27:14669342-14669683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
444-923
               

               
Cow position:
               
chr27:13901269-13901775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
94, 221
               

               
Conread position:
               
444-925
               

               
Cow position:
               
chr27:9332823-9333321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
447-923
               

               
Cow position:
               
chr27:25784605-25784112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
450-862
               

               
Cow position:
               
chr27:2681674-2682113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 213
               

               
Conread position:
               
450-1078
               

               
Cow position:
               
chr27:7819325-7818644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
458-1080
               

               
Cow position:
               
chr27:22329666-22330310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
462-910
               

               
Cow position:
               
chr27:1140861-1141334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 152
               

               
Conread position:
               
462-978
               

               
Cow position:
               
chr27:15867132-15866597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 99
               

               
Conread position:
               
465-1080
               

               
Cow position:
               
chr27:25677244-25676610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 193
               

               
Conread position:
               
482-1078
               

               
Cow position:
               
chr27:20865525-20866178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
485-987
               

               
Cow position:
               
chr27:11673188-11672677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
155, 25
               

               
Conread position:
               
505-1080
               

               
Cow position:
               
chr27:5423434-5424038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
521-897
               

               
Cow position:
               
chr27:8586713-8587108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
531-1080
               

               
Cow position:
               
chr27:9089885-9090452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
540-854
               

               
Cow position:
               
chr27:14859575-14859905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
543-1077
               

               
Cow position:
               
chr27:7417961-7418526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
549-928
               

               
Cow position:
               
chr27:18559674-18559277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
549-1067
               

               
Cow position:
               
chr27:27054238-27053683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
550-1080
               

               
Cow position:
               
chr27:30677822-30677262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 107
               

               
Conread position:
               
551-937
               

               
Cow position:
               
chr27:16332218-16331823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
566-923
               

               
Cow position:
               
chr27:15099918-15100291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
566-1077
               

               
Cow position:
               
chr27:11630620-11630087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 60
               

               
Conread position:
               
572-1080
               

               
Cow position:
               
chr27:15363548-15364098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 125
               

               
Conread position:
               
576-726
               

               
Cow position:
               
chr27:3257100-3256954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
585-919
               

               
Cow position:
               
chr27:29811597-29811949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
585-922
               

               
Cow position:
               
chr27:3649775-3650132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-922
               

               
Cow position:
               
chr27:30036163-30036529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
585-930
               

               
Cow position:
               
chr27:28984063-28984425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
585-1068
               

               
Cow position:
               
chr27:526229-526725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
585-1068
               

               
Cow position:
               
chr27:19300272-19299750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 27
               

               
Conread position:
               
585-1080
               

               
Cow position:
               
chr27:4824117-4824624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
586-923
               

               
Cow position:
               
chr27:791751-791394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
586-923
               

               
Cow position:
               
chr27:17476912-17476571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
591-922
               

               
Cow position:
               
chr27:26856338-26856691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
593-923
               

               
Cow position:
               
chr27:8262140-8262491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
599-923
               

               
Cow position:
               
chr27:24295952-24295608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
600-908
               

               
Cow position:
               
chr27:17422915-17423248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 307
               

               
Conread position:
               
603-923
               

               
Cow position:
               
chr27:13422852-13422512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
609-1032
               

               
Cow position:
               
chr27:29890941-29891387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
609-1072
               

               
Cow position:
               
chr27:12111887-12112359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
613-1032
               

               
Cow position:
               
chr27:28924209-28924657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
615-832
               

               
Cow position:
               
chr27:19064640-19064864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
620-919
               

               
Cow position:
               
chr27:12750865-12751178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
621-922
               

               
Cow position:
               
chr27:26644910-26644604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
634-1080
               

               
Cow position:
               
chr27:19963302-19962824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
97, 6
               

               
Conread position:
               
636-1077
               

               
Cow position:
               
chr27:24009127-24009582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
640-1068
               

               
Cow position:
               
chr27:30476895-30476424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
672-914
               

               
Cow position:
               
chr27:3703960-3704220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
672-919
               

               
Cow position:
               
chr27:9989496-9989233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
673-925
               

               
Cow position:
               
chr27:11954481-11954747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
686-1080
               

               
Cow position:
               
chr27:10321460-10321887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
695-925
               

               
Cow position:
               
chr27:16551220-16550978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
700-1029
               

               
Cow position:
               
chr27:24571029-24570690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 199
               

               
Conread position:
               
702-1080
               

               
Cow position:
               
chr27:8319955-8320352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
715-928
               

               
Cow position:
               
chr27:23233428-23233650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
717-923
               

               
Cow position:
               
chr27:23079527-23079738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
728-918
               

               
Cow position:
               
chr27:30777265-30777073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
735-923
               

               
Cow position:
               
chr27:26545211-26545407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
735-1073
               

               
Cow position:
               
chr27:13198614-13198255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 179
               

               
Conread position:
               
736-1077
               

               
Cow position:
               
chr27:11090493-11090837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
738-1080
               

               
Cow position:
               
chr27:17923369-17923736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
739-1044
               

               
Cow position:
               
chr27:11326516-11326185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
739-1067
               

               
Cow position:
               
chr27:26034058-26033712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
749-1080
               

               
Cow position:
               
chr27:30446920-30446569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
753-924
               

               
Cow position:
               
chr27:25971199-25971024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
757-928
               

               
Cow position:
               
chr27:5836305-5836478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
761-922
               

               
Cow position:
               
chr27:16110639-16110804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
766-1076
               

               
Cow position:
               
chr27:26620781-26620475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 87
               

               
Conread position:
               
767-1080
               

               
Cow position:
               
chr27:6293061-6292717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
769-923
               

               
Cow position:
               
chr27:537131-536976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
770-1080
               

               
Cow position:
               
chr27:23658067-23658390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
771-898
               

               
Cow position:
               
chr27:11813722-11813849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
771-918
               

               
Cow position:
               
chr27:5853246-5853393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 95
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr27:8427357-8427509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr27:16076209-16076058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 72
               

               
Conread position:
               
771-925
               

               
Cow position:
               
chr27:25112665-25112820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
771-930
               

               
Cow position:
               
chr27:30177014-30176854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
771-1028
               

               
Cow position:
               
chr27:28134402-28134680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
771-1068
               

               
Cow position:
               
chr27:16337700-16337393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
771-1071
               

               
Cow position:
               
chr27:8942023-8942340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
88, 293
               

               
Conread position:
               
771-1077
               

               
Cow position:
               
chr27:21247076-21246757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 128
               

               
Conread position:
               
771-1079
               

               
Cow position:
               
chr27:18740883-18741206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
111, 82
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr27:1354267-1353938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 198
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr27:8429752-8430078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr27:8569072-8569386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 184
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr27:13695835-13696164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
91, 298
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr27:19388691-19388369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 192
               

               
Conread position:
               
771-1080
               

               
Cow position:
               
chr27:27527536-27527864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
775-914
               

               
Cow position:
               
chr27:15508756-15508896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
775-922
               

               
Cow position:
               
chr27:4509251-4509103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
776-914
               

               
Cow position:
               
chr27:16836881-16836743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
776-923
               

               
Cow position:
               
chr27:8743592-8743451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
776-923
               

               
Cow position:
               
chr27:12147396-12147544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
776-1031
               

               
Cow position:
               
chr27:22244333-22244595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
777-1080
               

               
Cow position:
               
chr27:27683368-27683688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 254
               

               
Conread position:
               
778-898
               

               
Cow position:
               
chr27:5106687-5106808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-922
               

               
Cow position:
               
chr27:3340420-3340275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-922
               

               
Cow position:
               
chr27:11470038-11470183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:523526-523673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:724050-724196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:1031048-1030902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:1293753-1293899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:1481399-1481545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:8202494-8202348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:11095303-11095157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:11606380-11606234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:11651602-11651748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:15178878-15178732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:16045235-16045382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:19487478-19487332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:20001310-20001164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:23893840-23893986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-923
               

               
Cow position:
               
chr27:29374400-29374254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-925
               

               
Cow position:
               
chr27:15312863-15312715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-927
               

               
Cow position:
               
chr27:25472229-25472079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
778-1030
               

               
Cow position:
               
chr27:5914442-5914711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
778-1068
               

               
Cow position:
               
chr27:8187338-8187634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
81, 178
               

               
Conread position:
               
778-1077
               

               
Cow position:
               
chr27:23074619-23074300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 224
               

               
Conread position:
               
778-1080
               

               
Cow position:
               
chr27:6019061-6019362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
779-930
               

               
Cow position:
               
chr27:29046084-29046236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
779-945
               

               
Cow position:
               
chr27:22013730-22013895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 101
               

               
Conread position:
               
780-922
               

               
Cow position:
               
chr27:7748518-7748657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 100
               

               
Conread position:
               
780-1057
               

               
Cow position:
               
chr27:24065882-24066176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 284
               

               
Conread position:
               
781-923
               

               
Cow position:
               
chr27:4768829-4768972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
781-923
               

               
Cow position:
               
chr27:20828041-20828184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
781-928
               

               
Cow position:
               
chr27:1884884-1884736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
781-1073
               

               
Cow position:
               
chr27:16263984-16263665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 197
               

               
Conread position:
               
781-1074
               

               
Cow position:
               
chr27:12549771-12549458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
78, 285
               

               
Conread position:
               
781-1079
               

               
Cow position:
               
chr27:1636290-1636606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 189
               

               
Conread position:
               
783-1075
               

               
Cow position:
               
chr27:10274824-10275114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
785-906
               

               
Cow position:
               
chr27:2638133-2638255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
786-1032
               

               
Cow position:
               
chr27:16260323-16260575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
787-921
               

               
Cow position:
               
chr27:28008411-28008546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
788-1060
               

               
Cow position:
               
chr27:26445001-26445259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
245, 74
               

               
Conread position:
               
791-1080
               

               
Cow position:
               
chr27:4719250-4719553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 45
               

               
Conread position:
               
797-919
               

               
Cow position:
               
chr27:29492917-29493041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
797-1068
               

               
Cow position:
               
chr27:12006156-12005865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 270
               

               
Conread position:
               
797-1073
               

               
Cow position:
               
chr27:27063811-27064095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
128, 258
               

               
Conread position:
               
797-1078
               

               
Cow position:
               
chr27:23583722-23583434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
797-1080
               

               
Cow position:
               
chr27:9372151-9371846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 177
               

               
Conread position:
               
800-1074
               

               
Cow position:
               
chr27:22559718-22559426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
801-923
               

               
Cow position:
               
chr27:26598521-26598394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
809-1076
               

               
Cow position:
               
chr27:19578713-19578460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
811-921
               

               
Cow position:
               
chr27:19326150-19326038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
811-923
               

               
Cow position:
               
chr27:12098223-12098111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
812-1078
               

               
Cow position:
               
chr27:525783-525504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
818-1066
               

               
Cow position:
               
chr27:29860238-29860495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
822-1077
               

               
Cow position:
               
chr27:1088853-1088585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
824-1068
               

               
Cow position:
               
chr27:1654651-1654915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 243
               

               
Conread position:
               
831-1077
               

               
Cow position:
               
chr27:864918-864658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 230
               

               
Conread position:
               
834-1077
               

               
Cow position:
               
chr27:1032931-1032677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 127
               

               
Conread position:
               
848-1080
               

               
Cow position:
               
chr27:27019515-27019760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
857-1080
               

               
Cow position:
               
chr27:28685724-28685510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
176, 19
               

               
Conread position:
               
870-1080
               

               
Cow position:
               
chr27:31250277-31250505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 182
               

               
Conread position:
               
887-1080
               

               
Cow position:
               
chr27:22107720-22107912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
922-1074
               

               
Cow position:
               
chr27:15643958-15644108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 5
               

               
Conread position:
               
923-1074
               

               
Cow position:
               
chr27:30583243-30583093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
923-1077
               

               
Cow position:
               
chr27:19482582-19482430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
923-1077
               

               
Cow position:
               
chr27:25985233-25985385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
923-1078
               

               
Cow position:
               
chr27:15508928-15509084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
923-1080
               

               
Cow position:
               
chr27:12277778-12277934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
923-1080
               

               
Cow position:
               
chr27:22013899-22014053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
926-1035
               

               
Cow position:
               
chr27:2557319-2557211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
926-1044
               

               
Cow position:
               
chr27:22499216-22499099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
926-1057
               

               
Cow position:
               
chr27:12239820-12239950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 28
               

               
Conread position:
               
926-1059
               

               
Cow position:
               
chr27:15349310-15349441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:32467-32608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:724219-724360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:1481568-1481709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:1521354-1521495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:3650156-3650298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:11470205-11470346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:11651771-11651912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:12006823-12006964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:12147567-12147708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:13353980-13354122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:16045405-16045546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:16794575-16794716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:17403392-17403251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:18812183-18812042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:19487309-19487168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:20811091-20811232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:20858793-20858934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:26644579-26644438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:29446430-29446289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1068
               

               
Cow position:
               
chr27:30684405-30684263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 121
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr27:12751204-12751349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr27:17332140-17331997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr27:21349252-21349396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr27:27292068-27292212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr27:29234901-29234757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr27:31566088-31566232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1072
               

               
Cow position:
               
chr27:3729812-3729958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
926-1072
               

               
Cow position:
               
chr27:8959342-8959197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1072
               

               
Cow position:
               
chr27:26379826-26379682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr27:13876221-13876076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr27:24999241-24999386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
926-1073
               

               
Cow position:
               
chr27:26856715-26856861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr27:1293922-1294069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr27:4882104-4881957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr27:8973120-8973267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr27:11403404-11403257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr27:13901798-13901945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr27:14669884-14670032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr27:19146357-19146506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
926-1074
               

               
Cow position:
               
chr27:29811976-29812122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
926-1075
               

               
Cow position:
               
chr27:6074410-6074263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1075
               

               
Cow position:
               
chr27:26087718-26087570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
926-1076
               

               
Cow position:
               
chr27:16550957-16550809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1077
               

               
Cow position:
               
chr27:14881371-14881222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1078
               

               
Cow position:
               
chr27:17439115-17438964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1079
               

               
Cow position:
               
chr27:536953-536802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
926-1079
               

               
Cow position:
               
chr27:13843905-13843756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:777211-777056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:4389714-4389867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:12190949-12191100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:15272402-15272249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:16787331-16787176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:21393014-21393164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:22179293-22179445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:22418273-22418424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:23128948-23128795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:23454647-23454807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:24202883-24202731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:26142290-26142137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:26436208-26436361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:28018831-28018679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
926-1080
               

               
Cow position:
               
chr27:28293673-28293520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
927-1035
               

               
Cow position:
               
chr27:12230633-12230740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
927-1053
               

               
Cow position:
               
chr27:1141373-1141499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
927-1068
               

               
Cow position:
               
chr27:2332176-2332316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
927-1077
               

               
Cow position:
               
chr27:4509077-4508929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
927-1078
               

               
Cow position:
               
chr27:16576853-16576703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
927-1080
               

               
Cow position:
               
chr27:13317470-13317622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
928-1073
               

               
Cow position:
               
chr27:1502170-1502314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
928-1078
               

               
Cow position:
               
chr27:21986379-21986231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
929-1072
               

               
Cow position:
               
chr27:25964267-25964126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
930-1080
               

               
Cow position:
               
chr27:21578075-21578223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
931-1068
               

               
Cow position:
               
chr27:19325991-19325855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
933-1078
               

               
Cow position:
               
chr27:4294918-4295062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
933-1080
               

               
Cow position:
               
chr27:13976903-13977050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
933-1080
               

               
Cow position:
               
chr27:31230605-31230752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
936-1074
               

               
Cow position:
               
chr27:4983115-4983252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
936-1077
               

               
Cow position:
               
chr27:10986505-10986365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
939-1073
               

               
Cow position:
               
chr27:10980477-10980343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 107
               

               
Conread position:
               
939-1076
               

               
Cow position:
               
chr27:27737445-27737582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
950-1079
               

               
Cow position:
               
chr27:28106659-28106787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
950-1080
               

               
Cow position:
               
chr27:4869831-4869702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
83, 95
               

               
Conread position:
               
951-1078
               

               
Cow position:
               
chr27:23481504-23481377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 97
               

               
Conread position:
               
956-1080
               

               
Cow position:
               
chr27:23472720-23472596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
957-1080
               

               
Cow position:
               
chr27:11255983-11255856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
957-1080
               

               
Cow position:
               
chr27:17473287-17473164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
957-1080
               

               
Cow position:
               
chr27:23502928-23502805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
957-1080
               

               
Cow position:
               
chr27:23917554-23917677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
958-1065
               

               
Cow position:
               
chr27:4673480-4673373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 89
               

               
Conread position:
               
958-1080
               

               
Cow position:
               
chr27:9337978-9337856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
959-1072
               

               
Cow position:
               
chr27:11693273-11693386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 87
               

               
Conread position:
               
960-1079
               

               
Cow position:
               
chr27:6523523-6523404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
74, 87
               

               
Conread position:
               
962-1068
               

               
Cow position:
               
chr27:15201195-15201087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
963-1080
               

               
Cow position:
               
chr27:24342704-24342587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
964-1068
               

               
Cow position:
               
chr27:26796679-26796783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
965-1077
               

               
Cow position:
               
chr27:29612485-29612373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
973-1073
               

               
Cow position:
               
chr27:15319899-15319799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 74
               
Show alignments to all cow chromosomes.