Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8014G12.5
        

               Conread position:
               1-124
               

               Cow position:
               chr16:48998557-48998434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 59
               

               Conread position:
               233-350
               

               Cow position:
               chr16:48994891-48994774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-487
               

               Cow position:
               chr16:48992198-48992060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               127
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               484-581
               

               Cow position:
               chr16:48988492-48988395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               582-696
               

               Cow position:
               chr16:48986156-48986043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               723-866
               

               Cow position:
               chr16:48984234-48984091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               139
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               864-962
               

               Cow position:
               chr16:48982717-48982619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1033-1161
               

               Cow position:
               chr16:48977499-48977371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               118
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1159-1285
               

               Cow position:
               chr16:48976585-48976458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               123
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               115, 0
               
Show alignments to all cow chromosomes.