Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8014H12.3
        

               Conread position:
               44-181
               

               Cow position:
               chr13:45116292-45116155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               131
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-342
               

               Cow position:
               chr13:45114598-45114420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 16
               

               Conread position:
               337-445
               

               Cow position:
               chr13:45113822-45113714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               442-526
               

               Cow position:
               chr13:45113638-45113554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               80
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               525-618
               

               Cow position:
               chr13:45112919-45112826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               600-700
               

               Cow position:
               chr13:45112243-45112144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               699-1428
               

               Cow position:
               chr13:45110073-45109336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               748
               

               Alignm identity:
               625
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 90
               
Show alignments to all cow chromosomes.