Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8016N24.5 |
| Conread position: | 454-638 |
| Cow position: | chr12:8843042-8842853 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 476-636 |
| Cow position: | chr12:19691467-19691298 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 78 |
| Conread position: | 477-648 |
| Cow position: | chr12:11583171-11583341 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 478-630 |
| Cow position: | chr12:28804764-28804926 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 479-648 |
| Cow position: | chr12:1284686-1284511 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 95, 136 |
| Conread position: | 479-681 |
| Cow position: | chr12:8869108-8868890 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 480-587 |
| Cow position: | chr12:7108961-7109073 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-597 |
| Cow position: | chr12:37123285-37123402 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 480-617 |
| Cow position: | chr12:4134441-4134588 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 480-617 |
| Cow position: | chr12:36954602-36954466 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 480-619 |
| Cow position: | chr12:35218632-35218485 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 480-621 |
| Cow position: | chr12:40158467-40158317 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 480-622 |
| Cow position: | chr12:9229709-9229564 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 480-622 |
| Cow position: | chr12:44905413-44905563 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 480-624 |
| Cow position: | chr12:26869026-26868870 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 480-624 |
| Cow position: | chr12:47928988-47929137 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 480-626 |
| Cow position: | chr12:9465687-9465536 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 480-627 |
| Cow position: | chr12:12017649-12017805 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-628 |
| Cow position: | chr12:28011126-28010971 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-629 |
| Cow position: | chr12:8922016-8921859 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-629 |
| Cow position: | chr12:15162923-15163079 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 480-629 |
| Cow position: | chr12:24755252-24755105 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 480-629 |
| Cow position: | chr12:26223211-26223060 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-630 |
| Cow position: | chr12:18577622-18577768 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 480-630 |
| Cow position: | chr12:26782654-26782812 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-631 |
| Cow position: | chr12:31532631-31532479 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 480-632 |
| Cow position: | chr12:24180670-24180828 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 480-633 |
| Cow position: | chr12:40028982-40028823 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 480-634 |
| Cow position: | chr12:18123459-18123614 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-636 |
| Cow position: | chr12:42954121-42953967 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 96 |
| Conread position: | 480-637 |
| Cow position: | chr12:41091302-41091468 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 480-638 |
| Cow position: | chr12:28748707-28748879 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 480-638 |
| Cow position: | chr12:29162038-29161876 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 69 |
| Conread position: | 480-638 |
| Cow position: | chr12:42283064-42282895 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 480-644 |
| Cow position: | chr12:40910518-40910342 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 480-645 |
| Cow position: | chr12:44517963-44517790 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 480-646 |
| Cow position: | chr12:20479541-20479382 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 143, 37 |
| Conread position: | 480-648 |
| Cow position: | chr12:3950578-3950394 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-648 |
| Cow position: | chr12:4341947-4341793 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 480-648 |
| Cow position: | chr12:5714401-5714581 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 480-648 |
| Cow position: | chr12:6210384-6210207 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 480-648 |
| Cow position: | chr12:12031061-12030877 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-648 |
| Cow position: | chr12:17702460-17702275 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-648 |
| Cow position: | chr12:20326543-20326723 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 480-648 |
| Cow position: | chr12:22047242-22047421 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 480-648 |
| Cow position: | chr12:23574543-23574714 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 69 |
| Conread position: | 480-648 |
| Cow position: | chr12:24211189-24211364 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 81 |
| Conread position: | 480-648 |
| Cow position: | chr12:25820660-25820479 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-648 |
| Cow position: | chr12:27563064-27562876 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 480-648 |
| Cow position: | chr12:30590549-30590715 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 480-648 |
| Cow position: | chr12:30662176-30661999 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 146 |
| Conread position: | 480-648 |
| Cow position: | chr12:31959667-31959837 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 480-648 |
| Cow position: | chr12:35771259-35771070 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 480-648 |
| Cow position: | chr12:36501179-36500997 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 480-648 |
| Cow position: | chr12:41214549-41214370 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 480-648 |
| Cow position: | chr12:41580885-41581065 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 166 |
| Conread position: | 480-648 |
| Cow position: | chr12:44596041-44595859 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-648 |
| Cow position: | chr12:46143594-46143773 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-649 |
| Cow position: | chr12:18572414-18572582 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 480-649 |
| Cow position: | chr12:28650725-28650909 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 480-649 |
| Cow position: | chr12:29780129-29779962 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 41, 135 |
| Conread position: | 480-649 |
| Cow position: | chr12:29995688-29995510 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 480-649 |
| Cow position: | chr12:31228347-31228524 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-649 |
| Cow position: | chr12:40110162-40110334 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 480-650 |
| Cow position: | chr12:19866015-19866192 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 480-653 |
| Cow position: | chr12:6226874-6226696 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 480-653 |
| Cow position: | chr12:28213291-28213466 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 480-656 |
| Cow position: | chr12:2242112-2241930 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 480-656 |
| Cow position: | chr12:3510336-3510519 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-658 |
| Cow position: | chr12:32391618-32391811 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-660 |
| Cow position: | chr12:46673457-46673267 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-681 |
| Cow position: | chr12:5635675-5635468 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 480-681 |
| Cow position: | chr12:5658303-5658092 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 154 |
| Conread position: | 480-681 |
| Cow position: | chr12:9914564-9914774 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 95, 24 |
| Conread position: | 480-682 |
| Cow position: | chr12:33457920-33458133 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 480-691 |
| Cow position: | chr12:2711265-2711491 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 210 |
| Conread position: | 480-691 |
| Cow position: | chr12:30476250-30476479 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 480-692 |
| Cow position: | chr12:3906241-3906468 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 480-694 |
| Cow position: | chr12:40270313-40270101 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 7 |
| Conread position: | 480-710 |
| Cow position: | chr12:34161190-34161427 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 480-755 |
| Cow position: | chr12:17495419-17495134 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 481-648 |
| Cow position: | chr12:31841211-31841388 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 481-648 |
| Cow position: | chr12:44014066-44013889 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 26, 161 |
| Conread position: | 481-649 |
| Cow position: | chr12:30753496-30753672 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 74, 163 |
| Conread position: | 482-643 |
| Cow position: | chr12:24577479-24577309 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 482-646 |
| Cow position: | chr12:8943446-8943274 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 482-648 |
| Cow position: | chr12:6410953-6410784 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 109, 41 |
| Conread position: | 482-648 |
| Cow position: | chr12:7977822-7977991 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 482-648 |
| Cow position: | chr12:38512067-38511885 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 482-648 |
| Cow position: | chr12:45814490-45814311 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 155 |
| Conread position: | 482-649 |
| Cow position: | chr12:18021368-18021544 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 482-649 |
| Cow position: | chr12:25320698-25320873 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 482-649 |
| Cow position: | chr12:25455889-25456071 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 482-656 |
| Cow position: | chr12:44559361-44559547 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 482-681 |
| Cow position: | chr12:42966775-42966985 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 483-629 |
| Cow position: | chr12:5800811-5800963 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 484-648 |
| Cow position: | chr12:29969353-29969530 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 485-648 |
| Cow position: | chr12:19869249-19869416 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 485-656 |
| Cow position: | chr12:27803272-27803091 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 485-660 |
| Cow position: | chr12:22881825-22882019 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 486-629 |
| Cow position: | chr12:10461784-10461929 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 486-648 |
| Cow position: | chr12:31947902-31948066 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 102, 38 |
| Conread position: | 487-648 |
| Cow position: | chr12:5940127-5940291 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 501-646 |
| Cow position: | chr12:2805250-2805100 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 501-646 |
| Cow position: | chr12:25989398-25989252 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 501-648 |
| Cow position: | chr12:29694253-29694095 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 501-744 |
| Cow position: | chr12:30438039-30438291 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 502-648 |
| Cow position: | chr12:45431192-45431050 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 133, 29 |
| Conread position: | 507-648 |
| Cow position: | chr12:10491077-10491223 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 540-648 |
| Cow position: | chr12:34171059-34171165 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.