Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8016N24.5 |
| Conread position: | 1-177 |
| Cow position: | chr13:33164775-33164599 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-401 |
| Cow position: | chr13:33056228-33056017 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 456-636 |
| Cow position: | chr13:13954192-13954380 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 461-627 |
| Cow position: | chr13:15110519-15110338 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 471-626 |
| Cow position: | chr13:7790198-7790035 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 472-648 |
| Cow position: | chr13:12546723-12546912 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 474-648 |
| Cow position: | chr13:4420528-4420338 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 475-648 |
| Cow position: | chr13:5079045-5079221 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 477-636 |
| Cow position: | chr13:57475239-57475404 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 477-644 |
| Cow position: | chr13:24230389-24230214 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 157 |
| Conread position: | 478-624 |
| Cow position: | chr13:8652262-8652416 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 478-627 |
| Cow position: | chr13:19178452-19178294 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 478-630 |
| Cow position: | chr13:32949827-32949986 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 478-633 |
| Cow position: | chr13:62474623-62474783 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 478-648 |
| Cow position: | chr13:5752247-5752432 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 478-648 |
| Cow position: | chr13:10845769-10845592 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 478-648 |
| Cow position: | chr13:37516960-37517141 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 478-654 |
| Cow position: | chr13:12283014-12282827 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 479-617 |
| Cow position: | chr13:15947808-15947657 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 479-641 |
| Cow position: | chr13:23166921-23167091 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 479-649 |
| Cow position: | chr13:20879659-20879830 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 480-585 |
| Cow position: | chr13:38277963-38278067 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 480-589 |
| Cow position: | chr13:60436709-60436822 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 480-608 |
| Cow position: | chr13:19555926-19555797 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 480-609 |
| Cow position: | chr13:22025535-22025671 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 480-621 |
| Cow position: | chr13:966251-966103 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 480-626 |
| Cow position: | chr13:52284083-52283934 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 97 |
| Conread position: | 480-627 |
| Cow position: | chr13:6975616-6975771 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 480-627 |
| Cow position: | chr13:26847650-26847797 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 480-627 |
| Cow position: | chr13:30026286-30026132 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 73, 41 |
| Conread position: | 480-627 |
| Cow position: | chr13:36714994-36714839 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 480-627 |
| Cow position: | chr13:43594941-43595090 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 69 |
| Conread position: | 480-627 |
| Cow position: | chr13:45353220-45353063 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-628 |
| Cow position: | chr13:1011506-1011352 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 115 |
| Conread position: | 480-628 |
| Cow position: | chr13:5279015-5279169 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 111, 41 |
| Conread position: | 480-629 |
| Cow position: | chr13:9884942-9884785 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 480-629 |
| Cow position: | chr13:18491769-18491619 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 480-629 |
| Cow position: | chr13:34508050-34507894 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 480-629 |
| Cow position: | chr13:37981578-37981727 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 480-629 |
| Cow position: | chr13:60508945-60509101 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-629 |
| Cow position: | chr13:60599768-60599923 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 480-629 |
| Cow position: | chr13:60690548-60690710 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-630 |
| Cow position: | chr13:20814106-20814264 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 480-630 |
| Cow position: | chr13:20816487-20816329 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 480-631 |
| Cow position: | chr13:26261620-26261782 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 480-634 |
| Cow position: | chr13:5091487-5091654 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-634 |
| Cow position: | chr13:14771635-14771468 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 480-634 |
| Cow position: | chr13:47964025-47964182 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 480-636 |
| Cow position: | chr13:17338608-17338446 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 480-636 |
| Cow position: | chr13:21039424-21039591 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 480-636 |
| Cow position: | chr13:38012535-38012366 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 142 |
| Conread position: | 480-636 |
| Cow position: | chr13:60429904-60430064 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 480-638 |
| Cow position: | chr13:9587409-9587577 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 162 |
| Conread position: | 480-638 |
| Cow position: | chr13:49022696-49022858 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 480-639 |
| Cow position: | chr13:12045159-12045328 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 480-642 |
| Cow position: | chr13:51940905-51940740 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 40 |
| Conread position: | 480-643 |
| Cow position: | chr13:20839741-20839567 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 480-643 |
| Cow position: | chr13:24376664-24376498 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 480-644 |
| Cow position: | chr13:562964-563143 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 480-644 |
| Cow position: | chr13:15991048-15991231 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 480-644 |
| Cow position: | chr13:24776453-24776284 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 480-646 |
| Cow position: | chr13:28683533-28683360 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 106, 69 |
| Conread position: | 480-646 |
| Cow position: | chr13:42200793-42200617 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 480-647 |
| Cow position: | chr13:20231026-20231194 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-648 |
| Cow position: | chr13:1042782-1042973 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 480-648 |
| Cow position: | chr13:2774298-2774127 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 480-648 |
| Cow position: | chr13:5658556-5658730 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 47, 136 |
| Conread position: | 480-648 |
| Cow position: | chr13:5758171-5758346 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 107, 46 |
| Conread position: | 480-648 |
| Cow position: | chr13:6153605-6153788 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 480-648 |
| Cow position: | chr13:6974334-6974157 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 480-648 |
| Cow position: | chr13:7076430-7076251 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 480-648 |
| Cow position: | chr13:8524448-8524622 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 480-648 |
| Cow position: | chr13:9643708-9643891 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 480-648 |
| Cow position: | chr13:9974894-9975078 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 480-648 |
| Cow position: | chr13:11061158-11060984 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 140 |
| Conread position: | 480-648 |
| Cow position: | chr13:15041298-15041477 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-648 |
| Cow position: | chr13:15162491-15162649 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 480-648 |
| Cow position: | chr13:15974784-15974608 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 480-648 |
| Cow position: | chr13:18166904-18166728 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 113, 69 |
| Conread position: | 480-648 |
| Cow position: | chr13:19223823-19223643 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 480-648 |
| Cow position: | chr13:20570906-20570723 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 480-648 |
| Cow position: | chr13:20649809-20649990 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 480-648 |
| Cow position: | chr13:21155315-21155498 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 480-648 |
| Cow position: | chr13:21283532-21283708 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 480-648 |
| Cow position: | chr13:25531614-25531796 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 480-648 |
| Cow position: | chr13:25547419-25547586 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 117, 23 |
| Conread position: | 480-648 |
| Cow position: | chr13:25926966-25926786 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-648 |
| Cow position: | chr13:34052427-34052593 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 480-648 |
| Cow position: | chr13:34261406-34261230 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 480-648 |
| Cow position: | chr13:34728663-34728851 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-648 |
| Cow position: | chr13:36346145-36345967 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 480-648 |
| Cow position: | chr13:37592764-37592950 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-648 |
| Cow position: | chr13:43839373-43839547 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 77 |
| Conread position: | 480-648 |
| Cow position: | chr13:46112141-46111961 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 480-648 |
| Cow position: | chr13:46181963-46181788 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 480-648 |
| Cow position: | chr13:52749313-52749478 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 480-648 |
| Cow position: | chr13:54093914-54093741 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 480-648 |
| Cow position: | chr13:61990160-61990339 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-649 |
| Cow position: | chr13:1780007-1779824 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 480-649 |
| Cow position: | chr13:2192882-2192708 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 80, 44 |
| Conread position: | 480-649 |
| Cow position: | chr13:2414200-2414024 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 480-649 |
| Cow position: | chr13:8201312-8201487 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 480-649 |
| Cow position: | chr13:24715416-24715237 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 480-649 |
| Cow position: | chr13:54237520-54237348 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 480-675 |
| Cow position: | chr13:15192720-15192919 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 106, 35 |
| Conread position: | 480-678 |
| Cow position: | chr13:3315500-3315712 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 33, 65 |
| Conread position: | 480-678 |
| Cow position: | chr13:49805149-49804938 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 480-681 |
| Cow position: | chr13:9246888-9246693 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 480-681 |
| Cow position: | chr13:12207217-12207010 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 149 |
| Conread position: | 480-682 |
| Cow position: | chr13:18244030-18243825 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 100, 29 |
| Conread position: | 480-741 |
| Cow position: | chr13:21276029-21275756 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-742 |
| Cow position: | chr13:24754058-24753783 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 481-637 |
| Cow position: | chr13:52894317-52894158 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 138 |
| Conread position: | 481-649 |
| Cow position: | chr13:4038053-4037888 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 481-651 |
| Cow position: | chr13:44202162-44201994 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 137, 67 |
| Conread position: | 482-629 |
| Cow position: | chr13:48251820-48251968 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 87, 46 |
| Conread position: | 482-636 |
| Cow position: | chr13:25261636-25261799 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 482-638 |
| Cow position: | chr13:17613518-17613351 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 482-646 |
| Cow position: | chr13:8362574-8362753 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 482-648 |
| Cow position: | chr13:2339602-2339432 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 482-648 |
| Cow position: | chr13:20041789-20041974 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 482-648 |
| Cow position: | chr13:52879584-52879408 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 482-649 |
| Cow position: | chr13:23270041-23270214 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 482-681 |
| Cow position: | chr13:11096344-11096141 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 483-648 |
| Cow position: | chr13:8609380-8609551 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 483-648 |
| Cow position: | chr13:16024763-16024585 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 483-648 |
| Cow position: | chr13:61166286-61166455 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 8, 77 |
| Conread position: | 484-635 |
| Cow position: | chr13:8838824-8838977 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 484-648 |
| Cow position: | chr13:9800669-9800506 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 141, 25 |
| Conread position: | 484-648 |
| Cow position: | chr13:15869290-15869119 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 484-648 |
| Cow position: | chr13:17622455-17622284 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 485-648 |
| Cow position: | chr13:15281764-15281944 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 485-648 |
| Cow position: | chr13:29831265-29831436 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 485-649 |
| Cow position: | chr13:13465621-13465784 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 486-630 |
| Cow position: | chr13:21708349-21708203 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 486-648 |
| Cow position: | chr13:22030256-22030092 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 98, 151 |
| Conread position: | 489-649 |
| Cow position: | chr13:45726057-45725890 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 491-644 |
| Cow position: | chr13:5263130-5263281 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 493-646 |
| Cow position: | chr13:52284969-52284806 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 498-636 |
| Cow position: | chr13:36771264-36771408 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 498-644 |
| Cow position: | chr13:7663268-7663422 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 501-648 |
| Cow position: | chr13:52929862-52929707 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 506-648 |
| Cow position: | chr13:39368103-39367959 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 511-648 |
| Cow position: | chr13:20360413-20360275 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 534-648 |
| Cow position: | chr13:55947891-55947769 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 635-757 |
| Cow position: | chr13:16908121-16907999 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 13 |
Show alignments to all cow chromosomes.