Cow genome map

Conread name: Ss1.1-Pig3-SRG8016N24.5

Conread position: 473-638
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 475-636
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 477-648
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 477-648
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 478-631
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 78

Conread position: 478-636
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 478-638
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 54

Conread position: 478-639
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 40

Conread position: 478-698
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 84

Conread position: 479-629
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 80

Conread position: 480-585
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 23

Conread position: 480-610
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 115

Conread position: 480-624
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 89, 69

Conread position: 480-624
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 71, 40

Conread position: 480-626
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 69

Conread position: 480-627
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 480-627
Cow position:
Alignm length: 158
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 480-627
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 72

Conread position: 480-628
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 22

Conread position: 480-629
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 480-630
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 480-632
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 480-632
Cow position:
Alignm length: 160
Alignm identity: 130
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 118

Conread position: 480-633
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 76

Conread position: 480-635
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 64

Conread position: 480-636
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 69

Conread position: 480-636
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 73

Conread position: 480-636
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 83

Conread position: 480-636
Cow position:
Alignm length: 159
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 106

Conread position: 480-636
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 78

Conread position: 480-637
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 162

Conread position: 480-637
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 149

Conread position: 480-638
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 151

Conread position: 480-638
Cow position:
Alignm length: 171
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 73

Conread position: 480-638
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 70

Conread position: 480-638
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 73

Conread position: 480-641
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 113, 77

Conread position: 480-642
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 69

Conread position: 480-644
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 28

Conread position: 480-644
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 78

Conread position: 480-646
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 40

Conread position: 480-646
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 46

Conread position: 480-646
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 82

Conread position: 480-646
Cow position:
Alignm length: 170
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 31

Conread position: 480-648
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 81

Conread position: 480-648
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 81

Conread position: 480-648
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 72

Conread position: 480-648
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 24

Conread position: 480-648
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 44, 80

Conread position: 480-648
Cow position:
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 64

Conread position: 480-648
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 129, 18

Conread position: 480-648
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 60

Conread position: 480-648
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 44

Conread position: 480-648
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 165

Conread position: 480-648
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 26

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 24

Conread position: 480-648
Cow position:
Alignm length: 179
Alignm identity: 147
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 480-648
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 82

Conread position: 480-648
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 72

Conread position: 480-648
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 480-648
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 79

Conread position: 480-648
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 13

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 12

Conread position: 480-648
Cow position:
Alignm length: 179
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 84

Conread position: 480-648
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 84

Conread position: 480-648
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 26

Conread position: 480-648
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 480-648
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 78

Conread position: 480-648
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 480-648
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 480-648
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 480-648
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 15

Conread position: 480-648
Cow position:
Alignm length: 177
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 33, 80

Conread position: 480-648
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 176

Conread position: 480-648
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 84

Conread position: 480-648
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 76

Conread position: 480-649
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 73

Conread position: 480-649
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 21

Conread position: 480-649
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 80

Conread position: 480-649
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 77

Conread position: 480-649
Cow position:
Alignm length: 178
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 69

Conread position: 480-649
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 104, 23

Conread position: 480-650
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 480-650
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 71

Conread position: 480-650
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 159

Conread position: 480-657
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 98, 38

Conread position: 480-674
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 136

Conread position: 480-677
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 134

Conread position: 480-681
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 79

Conread position: 480-683
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 23

Conread position: 480-738
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 78

Conread position: 481-619
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 481-638
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 147

Conread position: 481-648
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 18

Conread position: 481-648
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 482-627
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 15

Conread position: 482-633
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 67

Conread position: 482-636
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 78

Conread position: 482-641
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 43

Conread position: 482-648
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 482-648
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 76

Conread position: 482-648
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 82, 46

Conread position: 482-649
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 79

Conread position: 483-648
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 483-755
Cow position:
Alignm length: 288
Alignm identity: 190
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 165

Conread position: 484-648
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 79

Conread position: 484-649
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 103, 25

Conread position: 484-685
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 22

Conread position: 486-648
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 65

Conread position: 488-638
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 72

Conread position: 490-648
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 58

Conread position: 491-627
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 491-646
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 86, 39

Conread position: 494-648
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 497-648
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 62

Conread position: 502-642
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 54

Conread position: 507-742
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 10

Conread position: 513-647
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 45

Show alignments to all cow chromosomes.