Cow genome map

Conread name: Ss1.1-Pig3-SRG8016N24.5

Conread position: 452-654
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 105

Conread position: 455-648
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 30

Conread position: 459-649
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 47

Conread position: 472-638
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 13

Conread position: 472-643
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 80

Conread position: 472-648
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 473-649
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 48

Conread position: 477-630
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 83

Conread position: 478-598
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 102

Conread position: 478-628
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 31

Conread position: 478-628
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 81

Conread position: 478-648
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 478-648
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 83

Conread position: 478-648
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 125

Conread position: 478-693
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 143

Conread position: 479-648
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 145, 0

Conread position: 480-585
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 480-599
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 480-613
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 480-622
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 72

Conread position: 480-627
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 23

Conread position: 480-627
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 21

Conread position: 480-627
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 26

Conread position: 480-627
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 97

Conread position: 480-628
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 81

Conread position: 480-629
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 35

Conread position: 480-629
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 480-629
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 23

Conread position: 480-630
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 148

Conread position: 480-631
Cow position:
Alignm length: 155
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 108

Conread position: 480-631
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 16

Conread position: 480-632
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 83

Conread position: 480-633
Cow position:
Alignm length: 167
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 85

Conread position: 480-633
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 76

Conread position: 480-636
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 27

Conread position: 480-637
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 104, 46

Conread position: 480-637
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 64

Conread position: 480-637
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 71

Conread position: 480-638
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 119

Conread position: 480-638
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 93

Conread position: 480-638
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 147

Conread position: 480-642
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 63

Conread position: 480-643
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 480-643
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 70

Conread position: 480-645
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 139

Conread position: 480-645
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 76

Conread position: 480-646
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 80

Conread position: 480-646
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 139

Conread position: 480-646
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 480-646
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 480-646
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 480-646
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 110

Conread position: 480-647
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 76

Conread position: 480-647
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 41

Conread position: 480-648
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 39, 72

Conread position: 480-648
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 71

Conread position: 480-648
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 131

Conread position: 480-648
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 480-648
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 77

Conread position: 480-648
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 480-648
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 480-648
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 480-648
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 80

Conread position: 480-648
Cow position:
Alignm length: 175
Alignm identity: 142
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 95, 69

Conread position: 480-648
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 72

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 72

Conread position: 480-648
Cow position:
Alignm length: 180
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 73

Conread position: 480-648
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 145, 18

Conread position: 480-648
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 480-648
Cow position:
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 109

Conread position: 480-648
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 23

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 72

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 107, 12

Conread position: 480-648
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 47

Conread position: 480-648
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 84

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 106, 42

Conread position: 480-648
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 40

Conread position: 480-648
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 144, 23

Conread position: 480-648
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 480-648
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 76

Conread position: 480-648
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 80

Conread position: 480-648
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 79

Conread position: 480-649
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 41

Conread position: 480-649
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 480-649
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 76

Conread position: 480-649
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 40

Conread position: 480-649
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 106, 35

Conread position: 480-649
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 480-649
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 480-653
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 480-661
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 73

Conread position: 480-672
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 22

Conread position: 480-679
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 203

Conread position: 480-682
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 75, 43

Conread position: 480-686
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 86

Conread position: 480-689
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 72

Conread position: 480-692
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 40

Conread position: 480-693
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 67

Conread position: 480-696
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 217

Conread position: 481-610
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 481-629
Cow position:
Alignm length: 159
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 482-627
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 51

Conread position: 482-629
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 482-648
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 93, 67

Conread position: 482-648
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 95

Conread position: 482-648
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 77

Conread position: 482-648
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 31

Conread position: 482-648
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 80

Conread position: 482-649
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 114, 39

Conread position: 483-585
Cow position:
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 483-643
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 69

Conread position: 484-613
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 484-627
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 485-677
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 77

Conread position: 486-657
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 159

Conread position: 487-648
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 76

Conread position: 488-636
Cow position:
Alignm length: 158
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 62

Conread position: 488-655
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 13

Conread position: 489-648
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 493-629
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 57

Conread position: 493-629
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 5

Conread position: 494-637
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 495-636
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 64

Conread position: 498-648
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 51

Conread position: 498-648
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 502-673
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 56

Conread position: 511-648
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 8

Conread position: 512-638
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 37

Conread position: 523-649
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 649-770
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 24

Conread position: 653-750
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.