Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8016N24.5 |
| Conread position: | 477-635 |
| Cow position: | chr21:38918086-38918241 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 477-649 |
| Cow position: | chr21:5426815-5426994 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 477-649 |
| Cow position: | chr21:18790684-18790507 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 478-627 |
| Cow position: | chr21:42145790-42145942 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 478-629 |
| Cow position: | chr21:44826011-44825860 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 478-638 |
| Cow position: | chr21:49700163-49699995 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 478-648 |
| Cow position: | chr21:6102387-6102208 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 478-648 |
| Cow position: | chr21:7582037-7581852 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 478-648 |
| Cow position: | chr21:30231829-30231641 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 478-649 |
| Cow position: | chr21:24765161-24765337 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 478-682 |
| Cow position: | chr21:21223162-21223368 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 478-692 |
| Cow position: | chr21:28882015-28882236 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 478-696 |
| Cow position: | chr21:30849067-30848847 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 20 |
| Conread position: | 478-698 |
| Cow position: | chr21:34739719-34739947 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 479-637 |
| Cow position: | chr21:13089594-13089429 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 479-648 |
| Cow position: | chr21:18780098-18779918 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 479-648 |
| Cow position: | chr21:22718907-22718730 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 85 |
| Conread position: | 479-712 |
| Cow position: | chr21:10000953-10001193 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 112, 41 |
| Conread position: | 480-585 |
| Cow position: | chr21:27146117-27146008 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 480-585 |
| Cow position: | chr21:31159131-31159244 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-618 |
| Cow position: | chr21:34658909-34659054 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 480-624 |
| Cow position: | chr21:9990387-9990536 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 480-624 |
| Cow position: | chr21:10151669-10151824 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 480-624 |
| Cow position: | chr21:12801872-12801726 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 480-624 |
| Cow position: | chr21:21169620-21169466 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 480-624 |
| Cow position: | chr21:29484858-29485005 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 480-624 |
| Cow position: | chr21:47009365-47009211 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 140 |
| Conread position: | 480-627 |
| Cow position: | chr21:17193885-17193723 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-627 |
| Cow position: | chr21:23586751-23586909 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-627 |
| Cow position: | chr21:42190294-42190146 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 20 |
| Conread position: | 480-628 |
| Cow position: | chr21:2927332-2927171 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 480-629 |
| Cow position: | chr21:23322209-23322047 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-629 |
| Cow position: | chr21:24607260-24607416 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 480-629 |
| Cow position: | chr21:43357389-43357227 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 34, 141 |
| Conread position: | 480-630 |
| Cow position: | chr21:41597690-41597854 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 480-633 |
| Cow position: | chr21:4399674-4399839 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-634 |
| Cow position: | chr21:37361593-37361440 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 29 |
| Conread position: | 480-636 |
| Cow position: | chr21:13128219-13128060 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 480-637 |
| Cow position: | chr21:3381207-3381042 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 480-637 |
| Cow position: | chr21:44251951-44251804 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 480-638 |
| Cow position: | chr21:10114454-10114293 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 480-638 |
| Cow position: | chr21:33729309-33729469 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 143 |
| Conread position: | 480-638 |
| Cow position: | chr21:36793767-36793934 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 480-641 |
| Cow position: | chr21:20925632-20925463 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 480-644 |
| Cow position: | chr21:36642782-36642953 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 480-644 |
| Cow position: | chr21:42913871-42913694 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 480-645 |
| Cow position: | chr21:33596-33769 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 480-645 |
| Cow position: | chr21:3585484-3585318 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 480-646 |
| Cow position: | chr21:5137615-5137435 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-646 |
| Cow position: | chr21:18494840-18495022 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 480-646 |
| Cow position: | chr21:20152822-20153007 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-646 |
| Cow position: | chr21:33791493-33791318 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 480-646 |
| Cow position: | chr21:39401469-39401644 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 480-646 |
| Cow position: | chr21:45330733-45330552 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-647 |
| Cow position: | chr21:46849248-46849075 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 97, 76 |
| Conread position: | 480-648 |
| Cow position: | chr21:957542-957726 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 480-648 |
| Cow position: | chr21:1058951-1059133 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 480-648 |
| Cow position: | chr21:1464103-1464283 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-648 |
| Cow position: | chr21:2785905-2785723 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 480-648 |
| Cow position: | chr21:5636846-5636670 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 480-648 |
| Cow position: | chr21:8235670-8235502 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 480-648 |
| Cow position: | chr21:9416117-9416303 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-648 |
| Cow position: | chr21:10005011-10004832 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 480-648 |
| Cow position: | chr21:10263915-10264086 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 106, 29 |
| Conread position: | 480-648 |
| Cow position: | chr21:12154010-12154184 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 146 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 480-648 |
| Cow position: | chr21:14452111-14452287 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 42, 136 |
| Conread position: | 480-648 |
| Cow position: | chr21:14760455-14760627 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 480-648 |
| Cow position: | chr21:15584539-15584366 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 480-648 |
| Cow position: | chr21:15911275-15911456 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 480-648 |
| Cow position: | chr21:17183796-17183975 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 480-648 |
| Cow position: | chr21:19258701-19258875 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 480-648 |
| Cow position: | chr21:20160558-20160729 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 77 |
| Conread position: | 480-648 |
| Cow position: | chr21:21480308-21480131 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 480-648 |
| Cow position: | chr21:21769999-21770180 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 480-648 |
| Cow position: | chr21:23311073-23310899 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 480-648 |
| Cow position: | chr21:24642394-24642574 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 480-648 |
| Cow position: | chr21:26648132-26647955 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 44, 118 |
| Conread position: | 480-648 |
| Cow position: | chr21:28734037-28733859 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-648 |
| Cow position: | chr21:32535851-32536030 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 480-648 |
| Cow position: | chr21:36795478-36795656 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 69 |
| Conread position: | 480-648 |
| Cow position: | chr21:38449577-38449392 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 480-648 |
| Cow position: | chr21:39809774-39809947 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 67 |
| Conread position: | 480-648 |
| Cow position: | chr21:40058680-40058860 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 480-648 |
| Cow position: | chr21:40589608-40589431 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 480-648 |
| Cow position: | chr21:44108882-44109056 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 480-648 |
| Cow position: | chr21:44671628-44671798 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 480-648 |
| Cow position: | chr21:45473882-45473705 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 480-649 |
| Cow position: | chr21:3763863-3763689 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 480-649 |
| Cow position: | chr21:10633766-10633583 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-649 |
| Cow position: | chr21:13738442-13738614 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 480-649 |
| Cow position: | chr21:28617462-28617645 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-649 |
| Cow position: | chr21:33562888-33563062 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 480-649 |
| Cow position: | chr21:34391096-34390921 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 480-649 |
| Cow position: | chr21:37345227-37345045 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-650 |
| Cow position: | chr21:4998612-4998432 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 480-677 |
| Cow position: | chr21:41579622-41579831 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 163 |
| Conread position: | 480-681 |
| Cow position: | chr21:10727155-10727364 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 104, 76 |
| Conread position: | 480-685 |
| Cow position: | chr21:39450294-39450072 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 214 |
| Conread position: | 480-762 |
| Cow position: | chr21:28443503-28443207 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 480-781 |
| Cow position: | chr21:42007585-42007267 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 481-627 |
| Cow position: | chr21:42500908-42501068 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 481-627 |
| Cow position: | chr21:47802384-47802233 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 481-636 |
| Cow position: | chr21:15445203-15445035 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 481-649 |
| Cow position: | chr21:28923992-28924163 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 43, 76 |
| Conread position: | 481-649 |
| Cow position: | chr21:28989488-28989664 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 481-738 |
| Cow position: | chr21:7132587-7132338 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 482-620 |
| Cow position: | chr21:32237174-32237317 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 67 |
| Conread position: | 482-633 |
| Cow position: | chr21:8985426-8985581 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 102, 67 |
| Conread position: | 482-638 |
| Cow position: | chr21:18414926-18415093 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 78 |
| Conread position: | 482-648 |
| Cow position: | chr21:6051383-6051556 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 71 |
| Conread position: | 482-648 |
| Cow position: | chr21:12462094-12461914 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 482-648 |
| Cow position: | chr21:27743618-27743802 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 482-648 |
| Cow position: | chr21:30607211-30607034 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 482-648 |
| Cow position: | chr21:32339860-32339687 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 482-648 |
| Cow position: | chr21:42841716-42841544 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 482-649 |
| Cow position: | chr21:8451771-8451947 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 482-649 |
| Cow position: | chr21:29978886-29978706 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 483-629 |
| Cow position: | chr21:912089-911935 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 483-648 |
| Cow position: | chr21:36789671-36789848 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 484-638 |
| Cow position: | chr21:13840200-13840366 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 484-654 |
| Cow position: | chr21:47764234-47764058 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 485-636 |
| Cow position: | chr21:15976514-15976671 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 485-645 |
| Cow position: | chr21:3236407-3236576 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 488-649 |
| Cow position: | chr21:4568168-4568339 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 488-682 |
| Cow position: | chr21:33997344-33997141 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 491-638 |
| Cow position: | chr21:25127486-25127643 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 491-646 |
| Cow position: | chr21:31253429-31253588 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 493-648 |
| Cow position: | chr21:1591443-1591607 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 493-649 |
| Cow position: | chr21:5455099-5454937 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 495-648 |
| Cow position: | chr21:23980292-23980129 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 496-648 |
| Cow position: | chr21:9980073-9979917 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 506-648 |
| Cow position: | chr21:26244824-26244967 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 49 |
| Conread position: | 510-648 |
| Cow position: | chr21:8527572-8527431 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 513-648 |
| Cow position: | chr21:6997846-6997993 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 515-649 |
| Cow position: | chr21:33360122-33359980 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 42 |
| Conread position: | 521-649 |
| Cow position: | chr21:30256350-30256215 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 522-648 |
| Cow position: | chr21:40432368-40432498 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 637-774 |
| Cow position: | chr21:23672892-23673026 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 648-762 |
| Cow position: | chr21:30970091-30970204 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 24 |
Show alignments to all cow chromosomes.