Cow genome map

Conread name: Ss1.1-Pig3-SRG8016N24.5

Conread position: 474-649
Cow position: chr25:12521158-12520976 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 86

Conread position: 475-573
Cow position: chr25:34363347-34363441 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 477-636
Cow position: chr25:14791558-14791727 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 84

Conread position: 477-648
Cow position: chr25:9961371-9961186 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 86

Conread position: 479-636
Cow position: chr25:17144240-17144394 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 19

Conread position: 479-648
Cow position: chr25:8918467-8918289 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 83

Conread position: 480-585
Cow position: chr25:16389483-16389375 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 480-615
Cow position: chr25:12778723-12778583 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 82

Conread position: 480-615
Cow position: chr25:17712343-17712488 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 480-624
Cow position: chr25:6256130-6255976 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 140

Conread position: 480-624
Cow position: chr25:35110321-35110165 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 76

Conread position: 480-624
Cow position: chr25:36026816-36026969 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 80

Conread position: 480-625
Cow position: chr25:15254522-15254378 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 72

Conread position: 480-627
Cow position: chr25:21042196-21042345 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 40

Conread position: 480-628
Cow position: chr25:21950935-21951087 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 134

Conread position: 480-628
Cow position: chr25:26090005-26089851 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 72

Conread position: 480-628
Cow position: chr25:36036971-36036817 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 72

Conread position: 480-629
Cow position: chr25:22203881-22203722 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 74

Conread position: 480-631
Cow position: chr25:16400441-16400296 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 13

Conread position: 480-632
Cow position: chr25:2110892-2111037 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 144, 12

Conread position: 480-636
Cow position: chr25:7329353-7329519 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 76

Conread position: 480-636
Cow position: chr25:10137907-10138063 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 43, 78

Conread position: 480-636
Cow position: chr25:10365943-10365779 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 80

Conread position: 480-636
Cow position: chr25:12239339-12239177 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 154

Conread position: 480-638
Cow position: chr25:11666465-11666621 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 26

Conread position: 480-638
Cow position: chr25:21289149-21289319 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 154

Conread position: 480-638
Cow position: chr25:21895077-21894910 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 80

Conread position: 480-639
Cow position: chr25:38425174-38425336 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 51

Conread position: 480-644
Cow position: chr25:13642507-13642329 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 480-645
Cow position: chr25:13736502-13736329 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 82

Conread position: 480-646
Cow position: chr25:13672197-13672380 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 480-646
Cow position: chr25:35612488-35612325 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 144, 18

Conread position: 480-647
Cow position: chr25:17704558-17704730 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 84

Conread position: 480-647
Cow position: chr25:28188140-28187958 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 480-648
Cow position: chr25:1735507-1735333 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 141

Conread position: 480-648
Cow position: chr25:3982853-3983028 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 72

Conread position: 480-648
Cow position: chr25:10218241-10218062 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 480-648
Cow position: chr25:11585327-11585505 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 84

Conread position: 480-648
Cow position: chr25:12755682-12755500 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 44, 18

Conread position: 480-648
Cow position: chr25:12824205-12824030 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 25

Conread position: 480-648
Cow position: chr25:13294715-13294878 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 18

Conread position: 480-648
Cow position: chr25:14833847-14833677 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 70

Conread position: 480-648
Cow position: chr25:14945633-14945463 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 22

Conread position: 480-648
Cow position: chr25:16921985-16921810 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 83

Conread position: 480-648
Cow position: chr25:17658422-17658598 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 79

Conread position: 480-648
Cow position: chr25:20133506-20133327 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 81

Conread position: 480-648
Cow position: chr25:25827271-25827458 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 480-648
Cow position: chr25:26087324-26087506 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 480-648
Cow position: chr25:26270125-26269950 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 81

Conread position: 480-648
Cow position: chr25:26700847-26701017 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 6

Conread position: 480-648
Cow position: chr25:30319640-30319459 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 172

Conread position: 480-648
Cow position: chr25:31732927-31732747 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 63

Conread position: 480-648
Cow position: chr25:33256177-33256341 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 71

Conread position: 480-648
Cow position: chr25:35344847-35345019 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 83

Conread position: 480-648
Cow position: chr25:36535627-36535446 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 78

Conread position: 480-648
Cow position: chr25:36761915-36762092 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 43, 72

Conread position: 480-649
Cow position: chr25:20060222-20060043 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 141

Conread position: 480-649
Cow position: chr25:35332977-35333147 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 23

Conread position: 480-649
Cow position: chr25:35625367-35625196 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 149
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 70

Conread position: 480-677
Cow position: chr25:12204279-12204483 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 44, 187

Conread position: 480-681
Cow position: chr25:34768911-34768711 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 145, 44

Conread position: 480-682
Cow position: chr25:20076306-20076517 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 56

Conread position: 480-692
Cow position: chr25:13569358-13569142 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 77, 50

Conread position: 480-694
Cow position: chr25:9396259-9396477 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 98

Conread position: 480-710
Cow position: chr25:16714465-16714219 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 196

Conread position: 480-780
Cow position: chr25:36033245-36033554 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 80

Conread position: 481-649
Cow position: chr25:24452358-24452187 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 71

Conread position: 481-649
Cow position: chr25:36081683-36081865 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 481-678
Cow position: chr25:14512925-14513131 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 40

Conread position: 482-624
Cow position: chr25:61468-61619 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 482-628
Cow position: chr25:11436991-11436846 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 50

Conread position: 482-636
Cow position: chr25:6424777-6424615 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 81

Conread position: 482-644
Cow position: chr25:21245796-21245621 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 86

Conread position: 482-648
Cow position: chr25:11315722-11315891 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 16

Conread position: 482-648
Cow position: chr25:16001709-16001538 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 105, 39

Conread position: 482-648
Cow position: chr25:16064707-16064879 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 29

Conread position: 482-648
Cow position: chr25:18905692-18905872 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 74

Conread position: 482-648
Cow position: chr25:18988187-18988377 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 482-648
Cow position: chr25:20020176-20020012 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 34

Conread position: 482-650
Cow position: chr25:17566398-17566575 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 169

Conread position: 483-682
Cow position: chr25:7581616-7581411 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 73

Conread position: 484-648
Cow position: chr25:788080-788251 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 19

Conread position: 486-646
Cow position: chr25:23323017-23323185 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 75

Conread position: 488-621
Cow position: chr25:15566233-15566099 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 72

Conread position: 489-648
Cow position: chr25:36138820-36138661 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 17

Conread position: 492-648
Cow position: chr25:15440958-15440791 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 5

Conread position: 492-649
Cow position: chr25:12081496-12081332 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 32

Conread position: 498-629
Cow position: chr25:4002627-4002767 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 499-649
Cow position: chr25:26654741-26654899 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 27

Conread position: 502-649
Cow position: chr25:12840896-12840735 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 507-645
Cow position: chr25:9634742-9634883 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 61

Conread position: 507-741
Cow position: chr25:20007973-20008219 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 51

Conread position: 510-648
Cow position: chr25:22241821-22241957 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 517-649
Cow position: chr25:22332611-22332751 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 526-648
Cow position: chr25:22730691-22730816 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 649-784
Cow position: chr25:18551244-18551106 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 127

Show alignments to all cow chromosomes.