Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8016N24.5 |
| Conread position: | 439-651 |
| Cow position: | chr26:20013269-20013487 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 461-615 |
| Cow position: | chr26:25073882-25074049 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 472-654 |
| Cow position: | chr26:22249662-22249465 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 478-626 |
| Cow position: | chr26:32898045-32897890 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 480-585 |
| Cow position: | chr26:7642749-7642640 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 480-588 |
| Cow position: | chr26:26670919-26670809 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-609 |
| Cow position: | chr26:5988893-5988762 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 99, 30 |
| Conread position: | 480-615 |
| Cow position: | chr26:25245149-25245012 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 34 |
| Conread position: | 480-617 |
| Cow position: | chr26:16167085-16166945 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-624 |
| Cow position: | chr26:33567215-33567066 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 59 |
| Conread position: | 480-633 |
| Cow position: | chr26:26294361-26294207 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 107, 27 |
| Conread position: | 480-633 |
| Cow position: | chr26:32013459-32013616 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 480-634 |
| Cow position: | chr26:7525640-7525488 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-636 |
| Cow position: | chr26:8746004-8745840 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-636 |
| Cow position: | chr26:19774476-19774310 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 480-636 |
| Cow position: | chr26:23097350-23097191 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 480-638 |
| Cow position: | chr26:29332918-29333085 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-642 |
| Cow position: | chr26:10764047-10764212 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 480-643 |
| Cow position: | chr26:30568828-30568655 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 480-644 |
| Cow position: | chr26:16549808-16549986 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-644 |
| Cow position: | chr26:25526074-25526251 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 480-644 |
| Cow position: | chr26:25737299-25737474 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-645 |
| Cow position: | chr26:34060161-34060336 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 480-647 |
| Cow position: | chr26:8810960-8811131 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 77 |
| Conread position: | 480-647 |
| Cow position: | chr26:34108592-34108763 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 480-648 |
| Cow position: | chr26:2531347-2531176 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 104, 41 |
| Conread position: | 480-648 |
| Cow position: | chr26:6723932-6724111 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 44, 160 |
| Conread position: | 480-648 |
| Cow position: | chr26:8700222-8700041 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-648 |
| Cow position: | chr26:14958191-14958013 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 159 |
| Conread position: | 480-648 |
| Cow position: | chr26:15200689-15200508 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 480-648 |
| Cow position: | chr26:16921772-16921944 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 480-648 |
| Cow position: | chr26:17057510-17057684 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 480-648 |
| Cow position: | chr26:21242931-21243108 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 57 |
| Conread position: | 480-648 |
| Cow position: | chr26:23926150-23925979 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 480-648 |
| Cow position: | chr26:27761821-27761650 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 480-649 |
| Cow position: | chr26:1587428-1587598 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 480-649 |
| Cow position: | chr26:6793968-6794152 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-649 |
| Cow position: | chr26:35448891-35449069 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 480-650 |
| Cow position: | chr26:27063844-27063663 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-660 |
| Cow position: | chr26:9104453-9104263 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 137 |
| Conread position: | 480-668 |
| Cow position: | chr26:31062028-31062223 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 43, 106 |
| Conread position: | 480-680 |
| Cow position: | chr26:32672612-32672400 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-692 |
| Cow position: | chr26:8186478-8186701 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 480-712 |
| Cow position: | chr26:798470-798227 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 480-741 |
| Cow position: | chr26:613844-613568 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 480-741 |
| Cow position: | chr26:11263465-11263743 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 76 |
| Conread position: | 481-626 |
| Cow position: | chr26:24280658-24280803 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 70 |
| Conread position: | 481-648 |
| Cow position: | chr26:22354242-22354419 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 481-649 |
| Cow position: | chr26:9604390-9604569 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 482-648 |
| Cow position: | chr26:4585380-4585204 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 482-648 |
| Cow position: | chr26:16796403-16796223 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 483-634 |
| Cow position: | chr26:9867284-9867128 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 485-646 |
| Cow position: | chr26:10768072-10767905 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 486-630 |
| Cow position: | chr26:14395401-14395257 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 487-637 |
| Cow position: | chr26:19459514-19459678 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 491-648 |
| Cow position: | chr26:32776669-32776500 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 492-636 |
| Cow position: | chr26:34256144-34256293 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 64 |
| Conread position: | 498-648 |
| Cow position: | chr26:14578172-14578333 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 501-648 |
| Cow position: | chr26:21991952-21992108 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 510-648 |
| Cow position: | chr26:33253462-33253310 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 513-648 |
| Cow position: | chr26:22152089-22152233 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 520-649 |
| Cow position: | chr26:7315231-7315100 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 532-741 |
| Cow position: | chr26:12893538-12893323 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 26 |
Show alignments to all cow chromosomes.