• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8016N24.5
        

               
Conread position:
               
382-637
               

               
Cow position:
               
chr4:38887421-38887162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
432-638
               

               
Cow position:
               
chr4:16593841-16594051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
447-648
               

               
Cow position:
               
chr4:27344902-27344696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
452-630
               

               
Cow position:
               
chr4:21392038-21391852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
472-629
               

               
Cow position:
               
chr4:19558512-19558680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
473-622
               

               
Cow position:
               
chr4:25359405-25359563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
473-648
               

               
Cow position:
               
chr4:55395565-55395745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
474-599
               

               
Cow position:
               
chr4:41907994-41907868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
474-650
               

               
Cow position:
               
chr4:16091602-16091416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
475-599
               

               
Cow position:
               
chr4:2536630-2536755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr4:18095878-18095686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
477-649
               

               
Cow position:
               
chr4:13941260-13941443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
477-649
               

               
Cow position:
               
chr4:16736304-16736484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
478-626
               

               
Cow position:
               
chr4:29237352-29237201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
479-623
               

               
Cow position:
               
chr4:33623521-33623667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
479-629
               

               
Cow position:
               
chr4:34171768-34171611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
479-632
               

               
Cow position:
               
chr4:29813738-29813583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
479-649
               

               
Cow position:
               
chr4:29291325-29291499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
480-585
               

               
Cow position:
               
chr4:10472027-10472133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
480-585
               

               
Cow position:
               
chr4:56409985-56410098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
480-599
               

               
Cow position:
               
chr4:19597512-19597392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
480-610
               

               
Cow position:
               
chr4:41292176-41292041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
480-615
               

               
Cow position:
               
chr4:46668374-46668513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
480-619
               

               
Cow position:
               
chr4:53447862-53447718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
480-620
               

               
Cow position:
               
chr4:41867248-41867391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
480-622
               

               
Cow position:
               
chr4:12259977-12259828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
480-624
               

               
Cow position:
               
chr4:59008566-59008416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
480-627
               

               
Cow position:
               
chr4:1915774-1915625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
480-627
               

               
Cow position:
               
chr4:5461056-5460908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
480-627
               

               
Cow position:
               
chr4:54667887-54667730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
480-627
               

               
Cow position:
               
chr4:56233491-56233638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
480-628
               

               
Cow position:
               
chr4:43370046-43369893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
480-629
               

               
Cow position:
               
chr4:27540425-27540575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
480-629
               

               
Cow position:
               
chr4:29384415-29384262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
480-629
               

               
Cow position:
               
chr4:34630705-34630853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
480-629
               

               
Cow position:
               
chr4:36724846-36724999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
480-629
               

               
Cow position:
               
chr4:43542929-43542775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
480-629
               

               
Cow position:
               
chr4:49424642-49424787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
480-630
               

               
Cow position:
               
chr4:23911786-23911622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
480-630
               

               
Cow position:
               
chr4:46058947-46058791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
480-630
               

               
Cow position:
               
chr4:57147121-57147279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
480-632
               

               
Cow position:
               
chr4:22860902-22860749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
480-633
               

               
Cow position:
               
chr4:11201621-11201782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
480-633
               

               
Cow position:
               
chr4:23509392-23509557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
480-633
               

               
Cow position:
               
chr4:27276737-27276580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
480-633
               

               
Cow position:
               
chr4:46370614-46370779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
480-636
               

               
Cow position:
               
chr4:3837083-3837240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
480-636
               

               
Cow position:
               
chr4:34209830-34210001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
480-636
               

               
Cow position:
               
chr4:44496188-44496339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
480-636
               

               
Cow position:
               
chr4:49089598-49089755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
480-636
               

               
Cow position:
               
chr4:52748654-52748491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
480-636
               

               
Cow position:
               
chr4:54501645-54501481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
480-637
               

               
Cow position:
               
chr4:15904902-15905068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
480-637
               

               
Cow position:
               
chr4:19238043-19238205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
480-637
               

               
Cow position:
               
chr4:20299074-20299241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
480-637
               

               
Cow position:
               
chr4:38799391-38799235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 115
               

               
Conread position:
               
480-637
               

               
Cow position:
               
chr4:43148207-43148373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
480-638
               

               
Cow position:
               
chr4:17833102-17832937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
480-638
               

               
Cow position:
               
chr4:31859065-31859231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
480-638
               

               
Cow position:
               
chr4:47289874-47290045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 151
               

               
Conread position:
               
480-638
               

               
Cow position:
               
chr4:57931714-57931885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
480-640
               

               
Cow position:
               
chr4:23854008-23854159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
480-640
               

               
Cow position:
               
chr4:38935162-38935327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
480-644
               

               
Cow position:
               
chr4:51768916-51769086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
480-646
               

               
Cow position:
               
chr4:4321202-4321021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
480-646
               

               
Cow position:
               
chr4:10999900-10999731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
480-646
               

               
Cow position:
               
chr4:31004601-31004429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
90, 69
               

               
Conread position:
               
480-646
               

               
Cow position:
               
chr4:44612806-44612984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
480-646
               

               
Cow position:
               
chr4:45775538-45775358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
480-647
               

               
Cow position:
               
chr4:25889029-25888850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
480-647
               

               
Cow position:
               
chr4:43515526-43515704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
480-647
               

               
Cow position:
               
chr4:56240041-56239879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:203342-203161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:480203-480026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:2602034-2602217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:3388348-3388526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:5984241-5984062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:5999389-5999208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:10016798-10016621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:11901759-11901579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:12591407-12591232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:12676616-12676785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:14414542-14414361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:18974236-18974405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:19542600-19542777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:19584508-19584698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:19708745-19708915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:22345211-22345039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
143, 76
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:23445249-23445064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:23526501-23526676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:23647039-23646867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:24119105-24118925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:25879199-25879379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:26746288-26746465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:27687727-27687909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:30690528-30690697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:30791768-30791952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
32, 135
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:32726026-32726206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:34310651-34310471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:35940208-35940025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:37465781-37465614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:37620084-37619906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:37935477-37935303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:38999230-38999402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:39231719-39231539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:43495705-43495879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:44782178-44782357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:45583324-45583137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:46456246-46456083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:48137713-48137894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:49794483-49794648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:51739899-51739727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:53209039-53209219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:53999703-53999527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:65650321-65650148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:65731116-65730938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr4:68764319-68764503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
480-649
               

               
Cow position:
               
chr4:1354810-1354640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
480-649
               

               
Cow position:
               
chr4:10056015-10056193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
480-649
               

               
Cow position:
               
chr4:41301187-41301010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
480-649
               

               
Cow position:
               
chr4:63813498-63813329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
480-653
               

               
Cow position:
               
chr4:44973446-44973623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
480-655
               

               
Cow position:
               
chr4:56570608-56570796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
480-657
               

               
Cow position:
               
chr4:60897469-60897283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
480-659
               

               
Cow position:
               
chr4:6653536-6653718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
480-681
               

               
Cow position:
               
chr4:11671256-11671466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 192
               

               
Conread position:
               
480-681
               

               
Cow position:
               
chr4:13589894-13590099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
480-681
               

               
Cow position:
               
chr4:33395886-33395682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
480-681
               

               
Cow position:
               
chr4:54190898-54191105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
480-682
               

               
Cow position:
               
chr4:24372047-24371845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
480-682
               

               
Cow position:
               
chr4:63349670-63349470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
121, 144
               

               
Conread position:
               
480-683
               

               
Cow position:
               
chr4:30974140-30974352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
480-697
               

               
Cow position:
               
chr4:11099865-11099640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
480-699
               

               
Cow position:
               
chr4:13974168-13973942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
480-700
               

               
Cow position:
               
chr4:39128335-39128569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
481-624
               

               
Cow position:
               
chr4:37342922-37343070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
481-627
               

               
Cow position:
               
chr4:28543796-28543648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
481-629
               

               
Cow position:
               
chr4:24688541-24688388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
481-629
               

               
Cow position:
               
chr4:48321833-48321982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr4:4084641-4084468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr4:11897494-11897313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
482-628
               

               
Cow position:
               
chr4:46591465-46591624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
482-637
               

               
Cow position:
               
chr4:19313810-19313980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
482-638
               

               
Cow position:
               
chr4:45367539-45367705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 164
               

               
Conread position:
               
482-646
               

               
Cow position:
               
chr4:11090881-11090725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
482-646
               

               
Cow position:
               
chr4:44676002-44676175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
482-646
               

               
Cow position:
               
chr4:51783987-51784160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr4:3850358-3850533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr4:23451290-23451113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr4:26400762-26400939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
31, 162
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr4:36929119-36929298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr4:47348637-47348811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
482-649
               

               
Cow position:
               
chr4:19316194-19316022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
482-649
               

               
Cow position:
               
chr4:19322273-19322095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
482-681
               

               
Cow position:
               
chr4:59871299-59871495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
484-637
               

               
Cow position:
               
chr4:8597886-8597728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
484-638
               

               
Cow position:
               
chr4:41602656-41602817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
484-648
               

               
Cow position:
               
chr4:34924885-34924708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
484-649
               

               
Cow position:
               
chr4:33869468-33869638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
485-646
               

               
Cow position:
               
chr4:65891797-65891972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
485-648
               

               
Cow position:
               
chr4:19561500-19561662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
485-648
               

               
Cow position:
               
chr4:65175334-65175163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
485-654
               

               
Cow position:
               
chr4:13255899-13256074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
486-638
               

               
Cow position:
               
chr4:46393249-46393404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr4:13222366-13222203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr4:41186091-41185928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
488-636
               

               
Cow position:
               
chr4:7704504-7704360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
488-646
               

               
Cow position:
               
chr4:1495593-1495422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
489-647
               

               
Cow position:
               
chr4:8769919-8770083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
490-636
               

               
Cow position:
               
chr4:22744140-22744286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
493-628
               

               
Cow position:
               
chr4:33421540-33421400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
497-649
               

               
Cow position:
               
chr4:54930604-54930436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
498-633
               

               
Cow position:
               
chr4:22849893-22849756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
498-648
               

               
Cow position:
               
chr4:509081-508927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
498-648
               

               
Cow position:
               
chr4:34383524-34383359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
498-648
               

               
Cow position:
               
chr4:46597199-46597361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
498-649
               

               
Cow position:
               
chr4:45662683-45662528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
501-647
               

               
Cow position:
               
chr4:61088393-61088542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
502-682
               

               
Cow position:
               
chr4:45685295-45685472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
503-646
               

               
Cow position:
               
chr4:52823577-52823430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
507-644
               

               
Cow position:
               
chr4:22236648-22236500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
507-648
               

               
Cow position:
               
chr4:27632284-27632429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
507-648
               

               
Cow position:
               
chr4:66547936-66547786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
510-648
               

               
Cow position:
               
chr4:19501250-19501110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
512-648
               

               
Cow position:
               
chr4:69385933-69386069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
517-646
               

               
Cow position:
               
chr4:61313364-61313233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
522-626
               

               
Cow position:
               
chr4:51605759-51605657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
532-648
               

               
Cow position:
               
chr4:5047479-5047358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
545-742
               

               
Cow position:
               
chr4:46218887-46219093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
649-774
               

               
Cow position:
               
chr4:1184841-1184966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 24
               
Show alignments to all cow chromosomes.