Cow genome map

Conread name: Ss1.1-Pig3-SRG8016N24.5

Conread position: 410-638
Cow position: chr6:602873-603108 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 141

Conread position: 441-648
Cow position: chr6:38609776-38609997 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 125

Conread position: 449-648
Cow position: chr6:16316125-16316331 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 472-692
Cow position: chr6:28156302-28156086 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 17

Conread position: 473-627
Cow position: chr6:12337828-12337994 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 473-654
Cow position: chr6:59069784-59069589 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 83

Conread position: 474-634
Cow position: chr6:23248118-23247954 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 82

Conread position: 474-649
Cow position: chr6:6343271-6343456 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 50, 78

Conread position: 474-650
Cow position: chr6:17345214-17345394 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 151

Conread position: 477-627
Cow position: chr6:60456679-60456831 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 62

Conread position: 477-648
Cow position: chr6:12629872-12630050 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 47, 164

Conread position: 478-646
Cow position: chr6:20230977-20230799 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 42

Conread position: 478-648
Cow position: chr6:16764793-16764628 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 42

Conread position: 478-648
Cow position: chr6:35990374-35990207 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 45

Conread position: 478-649
Cow position: chr6:528428-528254 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 87

Conread position: 478-649
Cow position: chr6:37149042-37149218 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 106, 42

Conread position: 478-677
Cow position: chr6:31635836-31635625 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 42

Conread position: 478-701
Cow position: chr6:8788188-8787962 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 141

Conread position: 479-628
Cow position: chr6:24327288-24327135 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 21

Conread position: 479-638
Cow position: chr6:9219123-9219286 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 73

Conread position: 479-648
Cow position: chr6:24515343-24515169 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 81

Conread position: 480-581
Cow position: chr6:21812581-21812684 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 72

Conread position: 480-583
Cow position: chr6:17067969-17067863 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 480-585
Cow position: chr6:18988067-18988170 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 480-598
Cow position: chr6:7694504-7694378 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 480-599
Cow position: chr6:21534910-21535027 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 23

Conread position: 480-599
Cow position: chr6:50119936-50119815 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 480-603
Cow position: chr6:55607955-55607837 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 480-604
Cow position: chr6:7989565-7989433 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 480-606
Cow position: chr6:37783269-37783400 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 480-615
Cow position: chr6:65711678-65711817 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 101

Conread position: 480-619
Cow position: chr6:53139078-53138924 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 480-621
Cow position: chr6:52705866-52705723 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 79

Conread position: 480-622
Cow position: chr6:47355675-47355819 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 80

Conread position: 480-623
Cow position: chr6:899439-899290 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 72

Conread position: 480-624
Cow position: chr6:61575454-61575611 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 480-625
Cow position: chr6:415945-416102 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 76

Conread position: 480-626
Cow position: chr6:54864816-54864666 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 111, 41

Conread position: 480-628
Cow position: chr6:37467688-37467537 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 98

Conread position: 480-628
Cow position: chr6:39994610-39994456 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 82

Conread position: 480-629
Cow position: chr6:8965940-8966098 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 480-629
Cow position: chr6:11246615-11246771 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 20

Conread position: 480-629
Cow position: chr6:67950810-67950960 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 90, 40

Conread position: 480-630
Cow position: chr6:6226873-6227025 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 101

Conread position: 480-630
Cow position: chr6:65676108-65676262 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 101

Conread position: 480-633
Cow position: chr6:15938002-15937840 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 52

Conread position: 480-633
Cow position: chr6:38641349-38641506 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 40

Conread position: 480-634
Cow position: chr6:50445912-50445748 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 480-634
Cow position: chr6:66433799-66433954 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 40

Conread position: 480-635
Cow position: chr6:4692133-4691966 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 84

Conread position: 480-635
Cow position: chr6:7190268-7190108 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 61

Conread position: 480-635
Cow position: chr6:36470712-36470552 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 33

Conread position: 480-636
Cow position: chr6:6098431-6098269 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 70

Conread position: 480-636
Cow position: chr6:6201292-6201441 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 96

Conread position: 480-636
Cow position: chr6:33276888-33277057 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 480-637
Cow position: chr6:607113-607276 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 83

Conread position: 480-637
Cow position: chr6:12543082-12542917 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 72

Conread position: 480-637
Cow position: chr6:32121762-32121919 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 83

Conread position: 480-637
Cow position: chr6:48112055-48112213 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 82, 31

Conread position: 480-637
Cow position: chr6:53731372-53731539 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 42, 65

Conread position: 480-638
Cow position: chr6:5462198-5462043 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 39

Conread position: 480-638
Cow position: chr6:19012920-19013084 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 46

Conread position: 480-638
Cow position: chr6:48281846-48282007 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 116

Conread position: 480-638
Cow position: chr6:48567491-48567331 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 480-638
Cow position: chr6:52025803-52025636 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 480-644
Cow position: chr6:130314-130141 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 76

Conread position: 480-644
Cow position: chr6:26910018-26909842 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 480-644
Cow position: chr6:53932997-53932824 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 73

Conread position: 480-645
Cow position: chr6:53519772-53519598 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 49, 71

Conread position: 480-646
Cow position: chr6:642726-642539 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 149

Conread position: 480-646
Cow position: chr6:44098935-44099114 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 480-646
Cow position: chr6:53710967-53711142 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 69

Conread position: 480-646
Cow position: chr6:58076075-58076257 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 480-647
Cow position: chr6:14850863-14850684 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 480-648
Cow position: chr6:611412-611580 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 23, 81

Conread position: 480-648
Cow position: chr6:4864689-4864518 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 113, 21

Conread position: 480-648
Cow position: chr6:5114196-5114020 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 28, 82

Conread position: 480-648
Cow position: chr6:5958172-5957999 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 82

Conread position: 480-648
Cow position: chr6:8125183-8125355 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 40

Conread position: 480-648
Cow position: chr6:9008760-9008583 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 480-648
Cow position: chr6:10612717-10612883 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 27

Conread position: 480-648
Cow position: chr6:10695718-10695892 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 76

Conread position: 480-648
Cow position: chr6:11169554-11169729 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 85

Conread position: 480-648
Cow position: chr6:16411046-16411220 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 46

Conread position: 480-648
Cow position: chr6:17997464-17997290 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 79

Conread position: 480-648
Cow position: chr6:19446111-19446282 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 480-648
Cow position: chr6:21231387-21231553 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 31

Conread position: 480-648
Cow position: chr6:24781713-24781526 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 480-648
Cow position: chr6:32335657-32335830 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 25

Conread position: 480-648
Cow position: chr6:34196297-34196122 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 44, 24

Conread position: 480-648
Cow position: chr6:37199688-37199498 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 480-648
Cow position: chr6:38441033-38441204 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 62

Conread position: 480-648
Cow position: chr6:38614675-38614848 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 31

Conread position: 480-648
Cow position: chr6:45160441-45160269 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 78

Conread position: 480-648
Cow position: chr6:47305190-47305370 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 72

Conread position: 480-648
Cow position: chr6:50984075-50984251 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 83

Conread position: 480-648
Cow position: chr6:54287931-54288101 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 26

Conread position: 480-648
Cow position: chr6:54293962-54294131 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 41

Conread position: 480-648
Cow position: chr6:55763705-55763884 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 480-648
Cow position: chr6:60239541-60239366 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 74

Conread position: 480-648
Cow position: chr6:60442269-60442443 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 55

Conread position: 480-648
Cow position: chr6:60739866-60740043 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 44, 79

Conread position: 480-648
Cow position: chr6:61137222-61137404 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 480-648
Cow position: chr6:68049286-68049460 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 44, 134

Conread position: 480-649
Cow position: chr6:9751189-9751024 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 40

Conread position: 480-649
Cow position: chr6:15300966-15300799 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 27

Conread position: 480-649
Cow position: chr6:40713651-40713473 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 81

Conread position: 480-649
Cow position: chr6:49604533-49604707 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 29

Conread position: 480-649
Cow position: chr6:49685436-49685615 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 63

Conread position: 480-649
Cow position: chr6:49694226-49694409 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 480-649
Cow position: chr6:57405274-57405095 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 26

Conread position: 480-649
Cow position: chr6:59108793-59108975 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 18

Conread position: 480-649
Cow position: chr6:60057805-60057625 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 480-649
Cow position: chr6:62925142-62924968 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 43

Conread position: 480-649
Cow position: chr6:63047427-63047608 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 480-654
Cow position: chr6:7128549-7128374 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 96

Conread position: 480-654
Cow position: chr6:35435855-35436031 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 44

Conread position: 480-677
Cow position: chr6:12500711-12500914 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 73

Conread position: 480-678
Cow position: chr6:64449240-64449450 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 480-681
Cow position: chr6:21110821-21111014 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 195, 50

Conread position: 480-681
Cow position: chr6:47989036-47989235 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 68

Conread position: 480-691
Cow position: chr6:37603374-37603576 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 79

Conread position: 480-691
Cow position: chr6:62324842-62325064 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 480-692
Cow position: chr6:54140664-54140870 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 41

Conread position: 480-696
Cow position: chr6:14696521-14696297 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 73

Conread position: 480-741
Cow position: chr6:42565536-42565816 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 73

Conread position: 480-741
Cow position: chr6:51674769-51675037 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 29

Conread position: 481-648
Cow position: chr6:35993429-35993613 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 481-648
Cow position: chr6:54369048-54368875 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 481-648
Cow position: chr6:54867362-54867546 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 74

Conread position: 481-681
Cow position: chr6:25407540-25407329 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 481-681
Cow position: chr6:65903765-65903561 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 71

Conread position: 481-781
Cow position: chr6:65904416-65904116 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 71

Conread position: 482-628
Cow position: chr6:32987145-32986992 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 76

Conread position: 482-646
Cow position: chr6:8804675-8804502 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 74

Conread position: 482-648
Cow position: chr6:15242685-15242863 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 74

Conread position: 482-648
Cow position: chr6:16700112-16700290 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 162

Conread position: 482-648
Cow position: chr6:18968922-18968751 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 24

Conread position: 482-648
Cow position: chr6:44078374-44078547 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 482-648
Cow position: chr6:44984179-44984359 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 80

Conread position: 482-648
Cow position: chr6:62479313-62479131 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 71

Conread position: 482-657
Cow position: chr6:3952375-3952556 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 115, 66

Conread position: 482-681
Cow position: chr6:10176450-10176239 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 157

Conread position: 482-738
Cow position: chr6:65862539-65862802 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 83

Conread position: 483-648
Cow position: chr6:29266059-29266233 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 483-648
Cow position: chr6:40834619-40834439 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 72

Conread position: 484-635
Cow position: chr6:57164282-57164441 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 9

Conread position: 484-645
Cow position: chr6:46292483-46292320 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 19

Conread position: 484-646
Cow position: chr6:17090450-17090625 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 78

Conread position: 484-648
Cow position: chr6:582412-582243 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 37

Conread position: 484-648
Cow position: chr6:19351299-19351126 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 74

Conread position: 484-648
Cow position: chr6:19681672-19681496 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 67

Conread position: 484-648
Cow position: chr6:60819370-60819542 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 75

Conread position: 485-633
Cow position: chr6:54365472-54365319 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 108, 62

Conread position: 485-648
Cow position: chr6:40032045-40032220 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 77

Conread position: 486-630
Cow position: chr6:59620526-59620677 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 486-648
Cow position: chr6:12668964-12669129 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 105, 36

Conread position: 486-648
Cow position: chr6:19996477-19996645 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 64

Conread position: 487-609
Cow position: chr6:50509536-50509663 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 74

Conread position: 488-634
Cow position: chr6:31564474-31564326 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 35

Conread position: 492-648
Cow position: chr6:25773518-25773356 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 19

Conread position: 494-650
Cow position: chr6:21052641-21052476 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 498-648
Cow position: chr6:53841630-53841477 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 499-687
Cow position: chr6:60667291-60667480 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 133

Conread position: 503-629
Cow position: chr6:31814863-31814732 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 123

Conread position: 527-648
Cow position: chr6:17794855-17794735 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.