Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8016N24.5 |
| Conread position: | 442-646 |
| Cow position: | chrX:47186522-47186310 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 111 |
| Conread position: | 445-647 |
| Cow position: | chrX:22387448-22387231 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 122 |
| Conread position: | 453-649 |
| Cow position: | chrX:870359-870165 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 454-648 |
| Cow position: | chrX:35969271-35969070 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 139, 69 |
| Conread position: | 468-648 |
| Cow position: | chrX:10278640-10278827 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 477-636 |
| Cow position: | chrX:34441617-34441449 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 478-628 |
| Cow position: | chrX:22074636-22074787 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 478-628 |
| Cow position: | chrX:38439310-38439472 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 478-646 |
| Cow position: | chrX:5872149-5872331 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 478-646 |
| Cow position: | chrX:17662761-17662581 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 478-648 |
| Cow position: | chrX:11082778-11082606 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 478-648 |
| Cow position: | chrX:37048744-37048565 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 173 |
| Conread position: | 478-648 |
| Cow position: | chrX:40567435-40567614 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 28, 163 |
| Conread position: | 478-648 |
| Cow position: | chrX:41122907-41123078 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 145, 20 |
| Conread position: | 478-692 |
| Cow position: | chrX:4269231-4269004 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 152 |
| Conread position: | 479-644 |
| Cow position: | chrX:46587654-46587834 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 479-648 |
| Cow position: | chrX:41743749-41743930 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 480-585 |
| Cow position: | chrX:25036862-25036751 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-599 |
| Cow position: | chrX:34663006-34662889 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 480-601 |
| Cow position: | chrX:16324126-16324004 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-618 |
| Cow position: | chrX:29509606-29509458 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-620 |
| Cow position: | chrX:48684385-48684239 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 480-623 |
| Cow position: | chrX:26625839-26625688 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 480-624 |
| Cow position: | chrX:11717945-11717799 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 480-625 |
| Cow position: | chrX:28847041-28846891 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 69 |
| Conread position: | 480-627 |
| Cow position: | chrX:21004519-21004673 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 480-627 |
| Cow position: | chrX:23091719-23091858 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-627 |
| Cow position: | chrX:42855246-42855401 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 142 |
| Conread position: | 480-627 |
| Cow position: | chrX:46072983-46072828 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 81 |
| Conread position: | 480-629 |
| Cow position: | chrX:878535-878388 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 480-629 |
| Cow position: | chrX:6278668-6278505 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-629 |
| Cow position: | chrX:19690055-19690213 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 120 |
| Conread position: | 480-629 |
| Cow position: | chrX:34401835-34401993 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 480-629 |
| Cow position: | chrX:42247346-42247191 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 480-630 |
| Cow position: | chrX:7863733-7863575 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-630 |
| Cow position: | chrX:21663146-21663300 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 102 |
| Conread position: | 480-630 |
| Cow position: | chrX:27446526-27446692 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 480-630 |
| Cow position: | chrX:29542381-29542224 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-631 |
| Cow position: | chrX:32020284-32020124 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 150 |
| Conread position: | 480-632 |
| Cow position: | chrX:6234611-6234454 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 95, 37 |
| Conread position: | 480-633 |
| Cow position: | chrX:13265782-13265625 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 106, 66 |
| Conread position: | 480-633 |
| Cow position: | chrX:19019273-19019106 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 480-633 |
| Cow position: | chrX:27509182-27509026 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 144 |
| Conread position: | 480-633 |
| Cow position: | chrX:29563533-29563380 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 480-634 |
| Cow position: | chrX:21665756-21665595 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 42, 137 |
| Conread position: | 480-634 |
| Cow position: | chrX:36975787-36975949 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-635 |
| Cow position: | chrX:34543624-34543779 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 480-636 |
| Cow position: | chrX:1505549-1505710 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 157 |
| Conread position: | 480-636 |
| Cow position: | chrX:25238014-25238172 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 480-636 |
| Cow position: | chrX:29120894-29121048 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 480-636 |
| Cow position: | chrX:31949093-31948936 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 480-636 |
| Cow position: | chrX:35609824-35609990 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 480-637 |
| Cow position: | chrX:10437827-10437665 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 31, 124 |
| Conread position: | 480-637 |
| Cow position: | chrX:17541801-17541962 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 480-637 |
| Cow position: | chrX:19930493-19930656 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 480-637 |
| Cow position: | chrX:20582868-20583024 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 480-638 |
| Cow position: | chrX:2467717-2467886 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 480-638 |
| Cow position: | chrX:26285817-26285982 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 480-639 |
| Cow position: | chrX:37574694-37574848 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 480-645 |
| Cow position: | chrX:8797085-8797269 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 480-645 |
| Cow position: | chrX:32820866-32821042 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-645 |
| Cow position: | chrX:42339098-42338936 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 121, 62 |
| Conread position: | 480-646 |
| Cow position: | chrX:6690410-6690246 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 480-646 |
| Cow position: | chrX:14003807-14003632 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 480-646 |
| Cow position: | chrX:31442984-31442815 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-646 |
| Cow position: | chrX:38549286-38549459 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 480-646 |
| Cow position: | chrX:38963944-38964122 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 480-646 |
| Cow position: | chrX:44396859-44397029 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-647 |
| Cow position: | chrX:10412151-10411971 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 480-648 |
| Cow position: | chrX:3579782-3579960 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 480-648 |
| Cow position: | chrX:5638328-5638153 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 480-648 |
| Cow position: | chrX:6407386-6407562 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 480-648 |
| Cow position: | chrX:6488424-6488595 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 113, 25 |
| Conread position: | 480-648 |
| Cow position: | chrX:7721822-7722008 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-648 |
| Cow position: | chrX:8925543-8925715 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 40 |
| Conread position: | 480-648 |
| Cow position: | chrX:9855138-9855314 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-648 |
| Cow position: | chrX:9953979-9954155 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 480-648 |
| Cow position: | chrX:15147350-15147177 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 480-648 |
| Cow position: | chrX:16416344-16416526 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 480-648 |
| Cow position: | chrX:17908446-17908272 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 480-648 |
| Cow position: | chrX:19188774-19188947 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 480-648 |
| Cow position: | chrX:20697770-20697593 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 480-648 |
| Cow position: | chrX:20752097-20752270 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 480-648 |
| Cow position: | chrX:21593121-21593303 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 480-648 |
| Cow position: | chrX:23497827-23497651 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 480-648 |
| Cow position: | chrX:23514177-23513999 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-648 |
| Cow position: | chrX:27394176-27394010 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 106, 45 |
| Conread position: | 480-648 |
| Cow position: | chrX:27516370-27516546 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 111, 41 |
| Conread position: | 480-648 |
| Cow position: | chrX:27772123-27771949 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-648 |
| Cow position: | chrX:30833008-30832836 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 480-648 |
| Cow position: | chrX:32128143-32127976 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 480-648 |
| Cow position: | chrX:36961473-36961657 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 480-648 |
| Cow position: | chrX:37489568-37489735 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 112, 35 |
| Conread position: | 480-648 |
| Cow position: | chrX:37836425-37836602 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 480-648 |
| Cow position: | chrX:39938685-39938507 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 480-648 |
| Cow position: | chrX:41068565-41068741 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 20 |
| Conread position: | 480-648 |
| Cow position: | chrX:41992204-41992030 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 480-648 |
| Cow position: | chrX:42461908-42461728 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 480-648 |
| Cow position: | chrX:42492677-42492507 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 147 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 44, 155 |
| Conread position: | 480-648 |
| Cow position: | chrX:42507809-42507632 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 163 |
| Conread position: | 480-648 |
| Cow position: | chrX:42874815-42874999 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-648 |
| Cow position: | chrX:42994450-42994629 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 480-649 |
| Cow position: | chrX:4044013-4043846 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 480-649 |
| Cow position: | chrX:7718692-7718866 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 480-649 |
| Cow position: | chrX:11633516-11633699 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 480-649 |
| Cow position: | chrX:34238558-34238736 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 480-649 |
| Cow position: | chrX:34502756-34502937 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 480-649 |
| Cow position: | chrX:35268725-35268883 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 143, 40 |
| Conread position: | 480-653 |
| Cow position: | chrX:1499507-1499686 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 111, 41 |
| Conread position: | 480-654 |
| Cow position: | chrX:1055552-1055375 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 34 |
| Conread position: | 480-654 |
| Cow position: | chrX:26876045-26875865 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 144 |
| Conread position: | 480-654 |
| Cow position: | chrX:38094689-38094500 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 480-674 |
| Cow position: | chrX:40647815-40648028 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 480-677 |
| Cow position: | chrX:33639809-33640025 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 480-678 |
| Cow position: | chrX:14900884-14900684 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 480-678 |
| Cow position: | chrX:25816058-25815864 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 480-678 |
| Cow position: | chrX:43730377-43730175 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 47 |
| Conread position: | 480-681 |
| Cow position: | chrX:41167127-41166912 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 480-682 |
| Cow position: | chrX:1514563-1514363 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 480-685 |
| Cow position: | chrX:15139707-15139493 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 480-692 |
| Cow position: | chrX:26440942-26440718 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 480-698 |
| Cow position: | chrX:7336666-7336892 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 480-698 |
| Cow position: | chrX:11856266-11856489 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 480-710 |
| Cow position: | chrX:12290573-12290798 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 480-740 |
| Cow position: | chrX:29876229-29875968 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 106, 78 |
| Conread position: | 480-741 |
| Cow position: | chrX:7351133-7351412 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 219 |
| Conread position: | 480-743 |
| Cow position: | chrX:18695082-18694813 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 480-750 |
| Cow position: | chrX:23970226-23970490 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 480-754 |
| Cow position: | chrX:40116259-40116532 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 481-635 |
| Cow position: | chrX:24105465-24105622 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 141 |
| Conread position: | 481-646 |
| Cow position: | chrX:29601994-29601814 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 32, 80 |
| Conread position: | 481-646 |
| Cow position: | chrX:47757090-47756914 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 481-648 |
| Cow position: | chrX:13382164-13382347 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 481-648 |
| Cow position: | chrX:28134184-28134357 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 19, 158 |
| Conread position: | 481-648 |
| Cow position: | chrX:28157333-28157516 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 481-649 |
| Cow position: | chrX:39558508-39558331 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 43, 47 |
| Conread position: | 481-679 |
| Cow position: | chrX:1503177-1503388 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 482-620 |
| Cow position: | chrX:17794825-17794960 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 482-636 |
| Cow position: | chrX:14924839-14925001 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 147 |
| Conread position: | 482-638 |
| Cow position: | chrX:23563957-23563789 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 152 |
| Conread position: | 482-646 |
| Cow position: | chrX:43527343-43527522 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 175 |
| Conread position: | 482-648 |
| Cow position: | chrX:4398965-4399142 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 482-651 |
| Cow position: | chrX:14973893-14973722 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 13 |
| Conread position: | 483-629 |
| Cow position: | chrX:27680242-27680390 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 484-648 |
| Cow position: | chrX:36355957-36356128 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 68 |
| Conread position: | 484-649 |
| Cow position: | chrX:151742-151922 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 137 |
| Conread position: | 485-646 |
| Cow position: | chrX:11589749-11589574 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 485-648 |
| Cow position: | chrX:15007311-15007133 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 71 |
| Conread position: | 485-648 |
| Cow position: | chrX:27227966-27228142 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 485-649 |
| Cow position: | chrX:28866153-28865986 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 124, 64 |
| Conread position: | 486-633 |
| Cow position: | chrX:11844403-11844249 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 490-615 |
| Cow position: | chrX:25411688-25411821 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 493-647 |
| Cow position: | chrX:29680409-29680246 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 30, 65 |
| Conread position: | 493-648 |
| Cow position: | chrX:47481650-47481816 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 494-649 |
| Cow position: | chrX:9365822-9365659 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 498-648 |
| Cow position: | chrX:30421073-30420924 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 498-648 |
| Cow position: | chrX:35681196-35681358 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 499-649 |
| Cow position: | chrX:11614556-11614715 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 513-648 |
| Cow position: | chrX:28845706-28845849 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 516-649 |
| Cow position: | chrX:5679689-5679552 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 41 |
| Conread position: | 649-742 |
| Cow position: | chrX:8759742-8759837 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.