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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8017D19.3
        

               
Conread position:
               
487-827
               

               
Cow position:
               
chr12:11587981-11587648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
517-827
               

               
Cow position:
               
chr12:15429411-15429720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
522-654
               

               
Cow position:
               
chr12:12293669-12293542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
522-744
               

               
Cow position:
               
chr12:48579014-48578800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
114, 18
               

               
Conread position:
               
523-751
               

               
Cow position:
               
chr12:14986926-14986699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
523-768
               

               
Cow position:
               
chr12:29966285-29966038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
523-886
               

               
Cow position:
               
chr12:12301109-12300735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 155
               

               
Conread position:
               
525-806
               

               
Cow position:
               
chr12:5680841-5680578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
240, 15
               

               
Conread position:
               
528-724
               

               
Cow position:
               
chr12:24639806-24639612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
528-744
               

               
Cow position:
               
chr12:12532315-12532533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
528-829
               

               
Cow position:
               
chr12:35652690-35652987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
529-672
               

               
Cow position:
               
chr12:17332050-17331893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
529-780
               

               
Cow position:
               
chr12:4594672-4594423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
530-709
               

               
Cow position:
               
chr12:11272655-11272834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
530-731
               

               
Cow position:
               
chr12:35137095-35136889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 142
               

               
Conread position:
               
530-826
               

               
Cow position:
               
chr12:38851851-38852154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
530-877
               

               
Cow position:
               
chr12:9710032-9710395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
530-878
               

               
Cow position:
               
chr12:35310508-35310858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 143
               

               
Conread position:
               
530-886
               

               
Cow position:
               
chr12:30919607-30919227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
531-732
               

               
Cow position:
               
chr12:18939048-18938837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
531-762
               

               
Cow position:
               
chr12:38154895-38155132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 142
               

               
Conread position:
               
531-773
               

               
Cow position:
               
chr12:10827959-10827714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 237
               

               
Conread position:
               
531-875
               

               
Cow position:
               
chr12:6241497-6241131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 138
               

               
Conread position:
               
531-886
               

               
Cow position:
               
chr12:42684761-42685140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
531-887
               

               
Cow position:
               
chr12:36119141-36118781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 244
               

               
Conread position:
               
532-734
               

               
Cow position:
               
chr12:37123824-37123616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 139
               

               
Conread position:
               
532-754
               

               
Cow position:
               
chr12:43474930-43474706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
532-821
               

               
Cow position:
               
chr12:18563333-18563032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
532-827
               

               
Cow position:
               
chr12:23446886-23446597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr12:12637013-12637370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
88, 136
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr12:25280331-25280675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
533-701
               

               
Cow position:
               
chr12:38031972-38032140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
101, 134
               

               
Conread position:
               
533-716
               

               
Cow position:
               
chr12:30042899-30042710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
77, 140
               

               
Conread position:
               
533-724
               

               
Cow position:
               
chr12:45782394-45782203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
533-728
               

               
Cow position:
               
chr12:583335-583537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
533-734
               

               
Cow position:
               
chr12:39149878-39150085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 140
               

               
Conread position:
               
533-825
               

               
Cow position:
               
chr12:25193212-25192929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr12:27563208-27563502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
533-857
               

               
Cow position:
               
chr12:14223154-14222820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 139
               

               
Conread position:
               
533-870
               

               
Cow position:
               
chr12:18103446-18103770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
533-871
               

               
Cow position:
               
chr12:4720115-4719767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
533-874
               

               
Cow position:
               
chr12:18518842-18518485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
533-887
               

               
Cow position:
               
chr12:35368815-35368446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
87, 69
               

               
Conread position:
               
534-734
               

               
Cow position:
               
chr12:43551046-43551255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
534-741
               

               
Cow position:
               
chr12:35469281-35469487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 131
               

               
Conread position:
               
534-806
               

               
Cow position:
               
chr12:31269330-31269048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
534-813
               

               
Cow position:
               
chr12:21922609-21922339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
272, 80
               

               
Conread position:
               
534-820
               

               
Cow position:
               
chr12:26749782-26750077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
534-823
               

               
Cow position:
               
chr12:1889410-1889701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
534-827
               

               
Cow position:
               
chr12:7110380-7110075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
534-827
               

               
Cow position:
               
chr12:29674969-29675262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
534-875
               

               
Cow position:
               
chr12:30210640-30210300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 81
               

               
Conread position:
               
534-887
               

               
Cow position:
               
chr12:31948282-31947924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
137, 72
               

               
Conread position:
               
535-707
               

               
Cow position:
               
chr12:17701867-17702035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
535-709
               

               
Cow position:
               
chr12:42951523-42951696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
535-717
               

               
Cow position:
               
chr12:2835574-2835389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
535-762
               

               
Cow position:
               
chr12:40881753-40881971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
535-767
               

               
Cow position:
               
chr12:6187941-6188180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
535-774
               

               
Cow position:
               
chr12:12233050-12232810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 134
               

               
Conread position:
               
535-780
               

               
Cow position:
               
chr12:17252034-17252277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
535-783
               

               
Cow position:
               
chr12:24273203-24273442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
147, 96
               

               
Conread position:
               
535-809
               

               
Cow position:
               
chr12:30413789-30414053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
535-821
               

               
Cow position:
               
chr12:9130072-9129779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
535-826
               

               
Cow position:
               
chr12:12530907-12531198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 164
               

               
Conread position:
               
535-826
               

               
Cow position:
               
chr12:19261364-19261074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr12:4596641-4596340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr12:15938101-15938391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr12:19258445-19258154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr12:36790646-36790936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
535-835
               

               
Cow position:
               
chr12:32051688-32051379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
535-849
               

               
Cow position:
               
chr12:34333284-34332957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
535-849
               

               
Cow position:
               
chr12:38126352-38126675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
535-853
               

               
Cow position:
               
chr12:34465849-34466157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
208, 76
               

               
Conread position:
               
535-870
               

               
Cow position:
               
chr12:40910115-40910466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 244
               

               
Conread position:
               
535-874
               

               
Cow position:
               
chr12:42967164-42966819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr12:38774076-38774422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 132
               

               
Conread position:
               
535-878
               

               
Cow position:
               
chr12:9229347-9229667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
536-767
               

               
Cow position:
               
chr12:5135401-5135166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
536-793
               

               
Cow position:
               
chr12:5554169-5554425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
107, 130
               

               
Conread position:
               
536-823
               

               
Cow position:
               
chr12:23836502-23836202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
536-874
               

               
Cow position:
               
chr12:7960418-7960758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
536-875
               

               
Cow position:
               
chr12:42180960-42181319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 135
               

               
Conread position:
               
536-887
               

               
Cow position:
               
chr12:25989047-25989391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
537-700
               

               
Cow position:
               
chr12:46106956-46106791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 136
               

               
Conread position:
               
537-703
               

               
Cow position:
               
chr12:43974459-43974287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
537-704
               

               
Cow position:
               
chr12:41684671-41684504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
537-839
               

               
Cow position:
               
chr12:9766714-9767020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
537-852
               

               
Cow position:
               
chr12:9482136-9482451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
537-873
               

               
Cow position:
               
chr12:7884513-7884850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 134
               

               
Conread position:
               
537-874
               

               
Cow position:
               
chr12:30806020-30805673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
537-883
               

               
Cow position:
               
chr12:35779754-35780113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
541-692
               

               
Cow position:
               
chr12:44892372-44892214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
541-733
               

               
Cow position:
               
chr12:38804440-38804622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
541-734
               

               
Cow position:
               
chr12:24397002-24397196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
541-743
               

               
Cow position:
               
chr12:19061345-19061548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
541-747
               

               
Cow position:
               
chr12:23106102-23105891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
69, 125
               

               
Conread position:
               
541-797
               

               
Cow position:
               
chr12:6688048-6687798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
541-815
               

               
Cow position:
               
chr12:35240940-35241214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
78, 131
               

               
Conread position:
               
541-825
               

               
Cow position:
               
chr12:10763409-10763141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
267, 73
               

               
Conread position:
               
541-860
               

               
Cow position:
               
chr12:20479181-20479492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
541-870
               

               
Cow position:
               
chr12:20776766-20777099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
541-873
               

               
Cow position:
               
chr12:11836391-11836053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
541-874
               

               
Cow position:
               
chr12:33976366-33976020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr12:4162210-4162549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr12:36544482-36544831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
95, 109
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr12:39486592-39486251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 245
               

               
Conread position:
               
541-877
               

               
Cow position:
               
chr12:33129417-33129084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
541-886
               

               
Cow position:
               
chr12:4769082-4768732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 126
               

               
Conread position:
               
541-887
               

               
Cow position:
               
chr12:5714781-5714433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 67
               

               
Conread position:
               
549-777
               

               
Cow position:
               
chr12:13911421-13911660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
549-874
               

               
Cow position:
               
chr12:44622515-44622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 133
               

               
Conread position:
               
550-722
               

               
Cow position:
               
chr12:22048078-22047903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr12:3057243-3057062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 122
               

               
Conread position:
               
550-734
               

               
Cow position:
               
chr12:37480683-37480868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
550-807
               

               
Cow position:
               
chr12:4954975-4954727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 108
               

               
Conread position:
               
550-807
               

               
Cow position:
               
chr12:25343938-25343679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr12:10942448-10942160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 127
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr12:17080420-17080135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
71, 223
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr12:26217673-26217951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr12:29899266-29899554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 221
               

               
Conread position:
               
550-863
               

               
Cow position:
               
chr12:13643389-13643066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 166
               

               
Conread position:
               
550-874
               

               
Cow position:
               
chr12:8943061-8943400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr12:36500793-36501132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 192
               

               
Conread position:
               
550-876
               

               
Cow position:
               
chr12:11057020-11056697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
550-876
               

               
Cow position:
               
chr12:15414717-15415057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
550-886
               

               
Cow position:
               
chr12:42282685-42283028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr12:17624682-17625017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
551-728
               

               
Cow position:
               
chr12:41989528-41989712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
551-734
               

               
Cow position:
               
chr12:17250657-17250482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
551-826
               

               
Cow position:
               
chr12:25027603-25027896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
551-864
               

               
Cow position:
               
chr12:1998645-1998971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
551-870
               

               
Cow position:
               
chr12:6468920-6469220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
301, 63
               

               
Conread position:
               
551-875
               

               
Cow position:
               
chr12:27802905-27803228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 72
               

               
Conread position:
               
552-702
               

               
Cow position:
               
chr12:44822434-44822292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
552-706
               

               
Cow position:
               
chr12:40309464-40309315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
552-708
               

               
Cow position:
               
chr12:19272538-19272696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 111
               

               
Conread position:
               
552-709
               

               
Cow position:
               
chr12:38679200-38679041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
552-716
               

               
Cow position:
               
chr12:25528410-25528575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
552-719
               

               
Cow position:
               
chr12:45126708-45126864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
552-723
               

               
Cow position:
               
chr12:4512299-4512472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
63, 112
               

               
Conread position:
               
552-728
               

               
Cow position:
               
chr12:6666713-6666547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
552-734
               

               
Cow position:
               
chr12:26357215-26357404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
552-735
               

               
Cow position:
               
chr12:2964198-2964016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
552-735
               

               
Cow position:
               
chr12:29316310-29316496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
552-736
               

               
Cow position:
               
chr12:23714824-23714640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
552-737
               

               
Cow position:
               
chr12:17108306-17108123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
552-737
               

               
Cow position:
               
chr12:31841722-31841533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
552-741
               

               
Cow position:
               
chr12:1701662-1701845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
552-741
               

               
Cow position:
               
chr12:29731463-29731274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
552-747
               

               
Cow position:
               
chr12:24166797-24166990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 108
               

               
Conread position:
               
552-748
               

               
Cow position:
               
chr12:2734759-2734955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 118
               

               
Conread position:
               
552-748
               

               
Cow position:
               
chr12:24437480-24437682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 121
               

               
Conread position:
               
552-749
               

               
Cow position:
               
chr12:22859602-22859419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
552-749
               

               
Cow position:
               
chr12:26147016-26147218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 120
               

               
Conread position:
               
552-749
               

               
Cow position:
               
chr12:43855042-43854846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
552-767
               

               
Cow position:
               
chr12:24181295-24181083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
552-770
               

               
Cow position:
               
chr12:45167856-45168088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
552-778
               

               
Cow position:
               
chr12:40157876-40158100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 109
               

               
Conread position:
               
552-782
               

               
Cow position:
               
chr12:33949052-33948823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
552-799
               

               
Cow position:
               
chr12:31883498-31883249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 150
               

               
Conread position:
               
552-807
               

               
Cow position:
               
chr12:23939371-23939120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
552-808
               

               
Cow position:
               
chr12:42286116-42285864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
552-813
               

               
Cow position:
               
chr12:18582847-18583104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
552-820
               

               
Cow position:
               
chr12:21780316-21780046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
552-823
               

               
Cow position:
               
chr12:1333369-1333107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 65
               

               
Conread position:
               
552-824
               

               
Cow position:
               
chr12:48415368-48415637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
552-825
               

               
Cow position:
               
chr12:3623843-3623571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
552-826
               

               
Cow position:
               
chr12:37008558-37008828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 115
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr12:16670418-16670140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr12:22485965-22485694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr12:24032640-24032376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr12:24116221-24116488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
256, 65
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr12:26576044-26575761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
87, 114
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr12:37169797-37170068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
552-831
               

               
Cow position:
               
chr12:7902653-7902931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
84, 64
               

               
Conread position:
               
552-855
               

               
Cow position:
               
chr12:19697546-19697246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
552-859
               

               
Cow position:
               
chr12:15050473-15050784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
552-862
               

               
Cow position:
               
chr12:1031116-1030813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
256, 57
               

               
Conread position:
               
552-865
               

               
Cow position:
               
chr12:17879153-17879475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
552-866
               

               
Cow position:
               
chr12:18577979-18577673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 59
               

               
Conread position:
               
552-869
               

               
Cow position:
               
chr12:15703343-15703673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr12:30170804-30170491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr12:32169698-32169363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr12:4341583-4341905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
65, 119
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr12:17882007-17881680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr12:18123818-18123504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 118
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr12:18420769-18421105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr12:19502262-19502598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 222
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr12:19714909-19715217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
198, 18
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr12:25561518-25561190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 115
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr12:31228735-31228392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
73, 231
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr12:39465717-39465400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
256, 58
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr12:41084197-41083875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
276, 22
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr12:34007451-34007110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr12:37728281-37727947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
171, 60
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr12:37732644-37732977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 60
               

               
Conread position:
               
552-888
               

               
Cow position:
               
chr12:12331376-12331697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
256, 58
               

               
Conread position:
               
553-716
               

               
Cow position:
               
chr12:35664108-35663948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
553-726
               

               
Cow position:
               
chr12:17273720-17273537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
553-748
               

               
Cow position:
               
chr12:45039258-45039060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
553-757
               

               
Cow position:
               
chr12:44542414-44542207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
85, 108
               

               
Conread position:
               
553-761
               

               
Cow position:
               
chr12:45069233-45069447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
553-786
               

               
Cow position:
               
chr12:18513775-18514012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
553-825
               

               
Cow position:
               
chr12:24152493-24152214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr12:34161554-34161234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
553-876
               

               
Cow position:
               
chr12:9143535-9143214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
553-877
               

               
Cow position:
               
chr12:23916990-23916658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
553-887
               

               
Cow position:
               
chr12:36012461-36012804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
554-662
               

               
Cow position:
               
chr12:3579634-3579520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
554-699
               

               
Cow position:
               
chr12:1952655-1952800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
554-707
               

               
Cow position:
               
chr12:17254292-17254135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
554-734
               

               
Cow position:
               
chr12:15389220-15389038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
554-735
               

               
Cow position:
               
chr12:29180824-29180639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
554-759
               

               
Cow position:
               
chr12:25814307-25814089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
554-762
               

               
Cow position:
               
chr12:45001921-45002128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
554-773
               

               
Cow position:
               
chr12:29057540-29057315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 111
               

               
Conread position:
               
554-824
               

               
Cow position:
               
chr12:3371704-3371981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
554-871
               

               
Cow position:
               
chr12:42879849-42879517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
554-873
               

               
Cow position:
               
chr12:25804995-25805290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr12:30745866-30745534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
77, 116
               

               
Conread position:
               
554-886
               

               
Cow position:
               
chr12:30590919-30590586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
554-886
               

               
Cow position:
               
chr12:33851506-33851165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr12:5635302-5635643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr12:6410586-6410927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr12:9914931-9914591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
555-693
               

               
Cow position:
               
chr12:36241238-36241378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
555-716
               

               
Cow position:
               
chr12:38552342-38552179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
555-733
               

               
Cow position:
               
chr12:41220864-41221041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
555-734
               

               
Cow position:
               
chr12:6465376-6465543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
555-779
               

               
Cow position:
               
chr12:47267159-47267388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 78
               

               
Conread position:
               
555-818
               

               
Cow position:
               
chr12:3616132-3615888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
555-870
               

               
Cow position:
               
chr12:15122474-15122143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr12:23574919-23574588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 224
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr12:31532260-31532588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr12:37993573-37993904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
555-878
               

               
Cow position:
               
chr12:22515589-22515921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
186, 85
               

               
Conread position:
               
555-887
               

               
Cow position:
               
chr12:19400667-19401003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
555-887
               

               
Cow position:
               
chr12:30194842-30194510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
556-680
               

               
Cow position:
               
chr12:38165393-38165520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
556-709
               

               
Cow position:
               
chr12:20439114-20439265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
556-731
               

               
Cow position:
               
chr12:44861109-44861290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 120
               

               
Conread position:
               
556-735
               

               
Cow position:
               
chr12:6958367-6958185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
556-746
               

               
Cow position:
               
chr12:20355371-20355167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
556-748
               

               
Cow position:
               
chr12:36261842-36261642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
556-870
               

               
Cow position:
               
chr12:17270685-17270368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
556-875
               

               
Cow position:
               
chr12:17031756-17031433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
556-886
               

               
Cow position:
               
chr12:17001389-17001068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
247, 48
               

               
Conread position:
               
557-716
               

               
Cow position:
               
chr12:18130658-18130502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
557-736
               

               
Cow position:
               
chr12:6480789-6480605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
557-783
               

               
Cow position:
               
chr12:5839514-5839733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
557-827
               

               
Cow position:
               
chr12:15089663-15089389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 113
               

               
Conread position:
               
557-828
               

               
Cow position:
               
chr12:16056708-16056986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
557-854
               

               
Cow position:
               
chr12:31517036-31517328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 54
               

               
Conread position:
               
557-875
               

               
Cow position:
               
chr12:18388140-18388464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
557-886
               

               
Cow position:
               
chr12:45363509-45363169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
559-827
               

               
Cow position:
               
chr12:22284976-22285244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
559-870
               

               
Cow position:
               
chr12:24023666-24023973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
560-827
               

               
Cow position:
               
chr12:17269945-17269674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
563-676
               

               
Cow position:
               
chr12:22260767-22260882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
563-767
               

               
Cow position:
               
chr12:6754332-6754130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
563-875
               

               
Cow position:
               
chr12:24663261-24662936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
565-803
               

               
Cow position:
               
chr12:37514148-37514382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
565-827
               

               
Cow position:
               
chr12:4866953-4866697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
565-875
               

               
Cow position:
               
chr12:40110491-40110203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
234, 33
               

               
Conread position:
               
566-876
               

               
Cow position:
               
chr12:25917138-25917446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
566-887
               

               
Cow position:
               
chr12:28749082-28748745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
567-767
               

               
Cow position:
               
chr12:9514505-9514295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
569-826
               

               
Cow position:
               
chr12:42254804-42254543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
51, 107
               

               
Conread position:
               
569-887
               

               
Cow position:
               
chr12:37771001-37770680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
572-709
               

               
Cow position:
               
chr12:11068546-11068410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
572-771
               

               
Cow position:
               
chr12:14914253-14914059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
183, 16
               

               
Conread position:
               
575-869
               

               
Cow position:
               
chr12:33323365-33323671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
575-875
               

               
Cow position:
               
chr12:30661820-30662131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 96
               

               
Conread position:
               
577-887
               

               
Cow position:
               
chr12:43942599-43942285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
578-827
               

               
Cow position:
               
chr12:7299335-7299586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
586-874
               

               
Cow position:
               
chr12:41159708-41159411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
590-812
               

               
Cow position:
               
chr12:5609395-5609619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
595-875
               

               
Cow position:
               
chr12:2813331-2813044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
596-876
               

               
Cow position:
               
chr12:6210058-6210340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
596-886
               

               
Cow position:
               
chr12:6488893-6489178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
598-875
               

               
Cow position:
               
chr12:19691133-19691416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
598-875
               

               
Cow position:
               
chr12:30605063-30605334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
600-886
               

               
Cow position:
               
chr12:33458246-33457951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
606-887
               

               
Cow position:
               
chr12:22882152-22881856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
608-827
               

               
Cow position:
               
chr12:30753814-30753598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
608-866
               

               
Cow position:
               
chr12:19507727-19507459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 59
               

               
Conread position:
               
608-875
               

               
Cow position:
               
chr12:29969671-29969398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
609-741
               

               
Cow position:
               
chr12:27572148-27572280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
609-827
               

               
Cow position:
               
chr12:14131678-14131888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
609-827
               

               
Cow position:
               
chr12:41474181-41473966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-827
               

               
Cow position:
               
chr12:46120739-46120955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
609-862
               

               
Cow position:
               
chr12:31959971-31959724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
609-871
               

               
Cow position:
               
chr12:44920134-44919856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr12:3510640-3510385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr12:7000513-7000787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
199, 60
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr12:29770487-29770755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
609-876
               

               
Cow position:
               
chr12:15531143-15530875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
195, 58
               

               
Conread position:
               
609-886
               

               
Cow position:
               
chr12:25321006-25320729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
609-886
               

               
Cow position:
               
chr12:42698154-42698417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
612-825
               

               
Cow position:
               
chr12:15173912-15173702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
612-840
               

               
Cow position:
               
chr12:3197355-3197129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
612-875
               

               
Cow position:
               
chr12:3950257-3950529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
612-886
               

               
Cow position:
               
chr12:17774883-17774605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
614-813
               

               
Cow position:
               
chr12:7311469-7311266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
614-815
               

               
Cow position:
               
chr12:18523656-18523452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
614-864
               

               
Cow position:
               
chr12:27037363-27037616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
614-887
               

               
Cow position:
               
chr12:44595723-44596003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
615-873
               

               
Cow position:
               
chr12:24211490-24211240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
193, 43
               

               
Conread position:
               
615-874
               

               
Cow position:
               
chr12:23798185-23797927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
615-875
               

               
Cow position:
               
chr12:18943574-18943828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
615-886
               

               
Cow position:
               
chr12:46333430-46333160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
616-875
               

               
Cow position:
               
chr12:29779829-29780084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
617-874
               

               
Cow position:
               
chr12:45820282-45820540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr12:6720411-6720141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr12:7978121-7977860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr12:25452367-25452626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
617-878
               

               
Cow position:
               
chr12:44517654-44517921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
618-855
               

               
Cow position:
               
chr12:41215801-41216046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
618-870
               

               
Cow position:
               
chr12:18765892-18766155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
619-819
               

               
Cow position:
               
chr12:15700162-15699955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
619-886
               

               
Cow position:
               
chr12:30438317-30438051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
621-775
               

               
Cow position:
               
chr12:4793277-4793122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
621-827
               

               
Cow position:
               
chr12:47804235-47804029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
622-884
               

               
Cow position:
               
chr12:25188267-25187995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
623-823
               

               
Cow position:
               
chr12:42234137-42233935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
623-875
               

               
Cow position:
               
chr12:34148280-34148531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
626-886
               

               
Cow position:
               
chr12:12304452-12304197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
200, 41
               

               
Conread position:
               
626-887
               

               
Cow position:
               
chr12:31198842-31198567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
630-869
               

               
Cow position:
               
chr12:25110373-25110612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
631-886
               

               
Cow position:
               
chr12:29921718-29921975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
177, 44
               

               
Conread position:
               
633-878
               

               
Cow position:
               
chr12:31429506-31429755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
175, 34
               

               
Conread position:
               
635-862
               

               
Cow position:
               
chr12:28582447-28582673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
173, 13
               

               
Conread position:
               
635-874
               

               
Cow position:
               
chr12:5906119-5905876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
635-874
               

               
Cow position:
               
chr12:46314641-46314884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
171, 33
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr12:5801106-5800852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
136, 98
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr12:8868819-8869059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr12:18963865-18964109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
173, 23
               

               
Conread position:
               
635-876
               

               
Cow position:
               
chr12:35378264-35378020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
635-887
               

               
Cow position:
               
chr12:29483823-29484084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
637-887
               

               
Cow position:
               
chr12:10491332-10491078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
171, 20
               

               
Conread position:
               
642-870
               

               
Cow position:
               
chr12:19664476-19664708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
166, 22
               

               
Conread position:
               
652-875
               

               
Cow position:
               
chr12:17717111-17716898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
664-872
               

               
Cow position:
               
chr12:16327529-16327320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
669-866
               

               
Cow position:
               
chr12:730904-731110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 82
               

               
Conread position:
               
669-875
               

               
Cow position:
               
chr12:34673308-34673522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
140, 110
               

               
Conread position:
               
670-827
               

               
Cow position:
               
chr12:37137495-37137648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
671-885
               

               
Cow position:
               
chr12:18420500-18420278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
672-875
               

               
Cow position:
               
chr12:3906502-3906290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
674-875
               

               
Cow position:
               
chr12:20326801-20326592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 88
               

               
Conread position:
               
675-875
               

               
Cow position:
               
chr12:15258691-15258887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 164
               

               
Conread position:
               
675-875
               

               
Cow position:
               
chr12:40028728-40028942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
697-865
               

               
Cow position:
               
chr12:34429152-34429316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
763-875
               

               
Cow position:
               
chr12:2805107-2805226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               
Show alignments to all cow chromosomes.