Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8017D19.3
        

               Conread position:
               441-706
               

               Cow position:
               chr13:23823345-23823082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               507-759
               

               Cow position:
               chr13:50623060-50622808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               507-825
               

               Cow position:
               chr13:14411645-14411956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               110, 33
               

               Conread position:
               511-875
               

               Cow position:
               chr13:28139340-28139695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               516-632
               

               Cow position:
               chr13:58421852-58421966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               516-710
               

               Cow position:
               chr13:21426059-21425874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               518-724
               

               Cow position:
               chr13:1363217-1363425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 103
               

               Conread position:
               519-875
               

               Cow position:
               chr13:25696001-25695639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               522-887
               

               Cow position:
               chr13:15041706-15041332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               93, 28
               

               Conread position:
               524-699
               

               Cow position:
               chr13:9108904-9108730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               113, 142
               

               Conread position:
               524-875
               

               Cow position:
               chr13:49503772-49503403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               14, 153
               

               Conread position:
               525-826
               

               Cow position:
               chr13:11820931-11821224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               525-886
               

               Cow position:
               chr13:12282606-12282975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               197, 34
               

               Conread position:
               527-708
               

               Cow position:
               chr13:23399535-23399720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               18, 144
               

               Conread position:
               527-737
               

               Cow position:
               chr13:52177374-52177582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               527-886
               

               Cow position:
               chr13:17292357-17291992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               107, 136
               

               Conread position:
               529-741
               

               Cow position:
               chr13:53850596-53850811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               529-748
               

               Cow position:
               chr13:37614421-37614196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               83, 10
               

               Conread position:
               529-887
               

               Cow position:
               chr13:16247416-16247799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               10, 206
               

               Conread position:
               530-709
               

               Cow position:
               chr13:37946611-37946434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               530-724
               

               Cow position:
               chr13:20535480-20535669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               530-728
               

               Cow position:
               chr13:17837163-17836965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               141, 133
               

               Conread position:
               530-734
               

               Cow position:
               chr13:53865411-53865616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               530-745
               

               Cow position:
               chr13:55775140-55775350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               92, 24
               

               Conread position:
               530-766
               

               Cow position:
               chr13:55765401-55765166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               530-773
               

               Cow position:
               chr13:50646854-50646617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               530-807
               

               Cow position:
               chr13:52459699-52459432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               104, 44
               

               Conread position:
               530-809
               

               Cow position:
               chr13:45108627-45108360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               182, 84
               

               Conread position:
               530-824
               

               Cow position:
               chr13:10925149-10924844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               92, 133
               

               Conread position:
               530-825
               

               Cow position:
               chr13:18999306-18999608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               530-825
               

               Cow position:
               chr13:42672655-42672352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               85, 10
               

               Conread position:
               530-827
               

               Cow position:
               chr13:42113790-42114090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               530-865
               

               Cow position:
               chr13:14575989-14576325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 136
               

               Conread position:
               530-870
               

               Cow position:
               chr13:2803262-2803593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               278, 10
               

               Conread position:
               530-874
               

               Cow position:
               chr13:19033329-19033682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               89, 218
               

               Conread position:
               530-874
               

               Cow position:
               chr13:52283683-52284036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               530-875
               

               Cow position:
               chr13:17745035-17745368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 10
               

               Conread position:
               530-875
               

               Cow position:
               chr13:23667030-23667384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               530-875
               

               Cow position:
               chr13:60509351-60508990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               37, 144
               

               Conread position:
               530-887
               

               Cow position:
               chr13:43139425-43139085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               214, 79
               

               Conread position:
               531-734
               

               Cow position:
               chr13:8637469-8637678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 142
               

               Conread position:
               531-752
               

               Cow position:
               chr13:55080912-55081140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               531-819
               

               Cow position:
               chr13:28552361-28552648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 126
               

               Conread position:
               531-825
               

               Cow position:
               chr13:18299170-18299472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               531-836
               

               Cow position:
               chr13:10220732-10221031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               84, 142
               

               Conread position:
               531-887
               

               Cow position:
               chr13:12045571-12045198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               78, 248
               

               Conread position:
               532-700
               

               Cow position:
               chr13:5659988-5659821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               532-700
               

               Cow position:
               chr13:23795604-23795442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 80
               

               Conread position:
               532-732
               

               Cow position:
               chr13:13797041-13796833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 143
               

               Conread position:
               532-761
               

               Cow position:
               chr13:47676161-47675928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 139
               

               Conread position:
               532-764
               

               Cow position:
               chr13:28536544-28536312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               78, 8
               

               Conread position:
               532-767
               

               Cow position:
               chr13:27180813-27181054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               82, 140
               

               Conread position:
               532-770
               

               Cow position:
               chr13:15996812-15997050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               532-814
               

               Cow position:
               chr13:17823174-17822892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 137
               

               Conread position:
               532-825
               

               Cow position:
               chr13:4158435-4158733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               532-827
               

               Cow position:
               chr13:17497997-17498289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               102, 42
               

               Conread position:
               532-874
               

               Cow position:
               chr13:2822643-2822987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               532-875
               

               Cow position:
               chr13:32017739-32017397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               87, 8
               

               Conread position:
               532-876
               

               Cow position:
               chr13:25579414-25579057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               532-883
               

               Cow position:
               chr13:1155929-1155571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               88, 34
               

               Conread position:
               532-887
               

               Cow position:
               chr13:9587806-9587447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               145, 34
               

               Conread position:
               532-887
               

               Cow position:
               chr13:13338634-13339000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               116, 102
               

               Conread position:
               533-693
               

               Cow position:
               chr13:53847342-53847182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               105, 133
               

               Conread position:
               533-709
               

               Cow position:
               chr13:32914485-32914301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 136
               

               Conread position:
               533-722
               

               Cow position:
               chr13:28605618-28605422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               533-725
               

               Cow position:
               chr13:62252068-62251874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 44
               

               Conread position:
               533-732
               

               Cow position:
               chr13:9124705-9124902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               101, 128
               

               Conread position:
               533-732
               

               Cow position:
               chr13:37030127-37030320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               533-738
               

               Cow position:
               chr13:11146830-11147041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 144
               

               Conread position:
               533-741
               

               Cow position:
               chr13:54236587-54236790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               533-747
               

               Cow position:
               chr13:50768368-50768589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               68, 143
               

               Conread position:
               533-758
               

               Cow position:
               chr13:10522717-10522937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               101, 7
               

               Conread position:
               533-807
               

               Cow position:
               chr13:11103431-11103141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               88, 143
               

               Conread position:
               533-825
               

               Cow position:
               chr13:40490994-40491283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               105, 66
               

               Conread position:
               533-827
               

               Cow position:
               chr13:5911114-5910828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               101, 44
               

               Conread position:
               533-874
               

               Cow position:
               chr13:45593699-45594033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               5, 129
               

               Conread position:
               533-875
               

               Cow position:
               chr13:20880048-20879702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 132
               

               Conread position:
               533-875
               

               Cow position:
               chr13:23961031-23960684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               533-875
               

               Cow position:
               chr13:45352804-45353175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               77, 139
               

               Conread position:
               533-886
               

               Cow position:
               chr13:12876199-12875831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 136
               

               Conread position:
               534-716
               

               Cow position:
               chr13:15162858-15162669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 139
               

               Conread position:
               534-724
               

               Cow position:
               chr13:21024761-21024954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 172
               

               Conread position:
               534-769
               

               Cow position:
               chr13:6183653-6183405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               534-770
               

               Cow position:
               chr13:9161713-9161938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               534-785
               

               Cow position:
               chr13:15069750-15069990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               229, 93
               

               Conread position:
               534-802
               

               Cow position:
               chr13:585096-584827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               75, 139
               

               Conread position:
               534-827
               

               Cow position:
               chr13:13196018-13196313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               534-866
               

               Cow position:
               chr13:9800300-9800626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               161, 18
               

               Conread position:
               534-870
               

               Cow position:
               chr13:12449203-12448868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               90, 41
               

               Conread position:
               534-886
               

               Cow position:
               chr13:51940524-51940876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 45
               

               Conread position:
               534-887
               

               Cow position:
               chr13:6616985-6616612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               78, 139
               

               Conread position:
               534-887
               

               Cow position:
               chr13:9846686-9846313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               535-692
               

               Cow position:
               chr13:14782127-14782280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               535-703
               

               Cow position:
               chr13:43342346-43342517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 134
               

               Conread position:
               535-716
               

               Cow position:
               chr13:8367497-8367677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 128
               

               Conread position:
               535-728
               

               Cow position:
               chr13:27028125-27027924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               80, 17
               

               Conread position:
               535-734
               

               Cow position:
               chr13:34533149-34532952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               130, 17
               

               Conread position:
               535-736
               

               Cow position:
               chr13:21277678-21277485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               535-736
               

               Cow position:
               chr13:22601907-22601713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               535-761
               

               Cow position:
               chr13:6486476-6486244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 142
               

               Conread position:
               535-762
               

               Cow position:
               chr13:20519848-20520069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               535-765
               

               Cow position:
               chr13:9707967-9707738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               535-770
               

               Cow position:
               chr13:1462513-1462281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               535-773
               

               Cow position:
               chr13:15993163-15993405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               535-784
               

               Cow position:
               chr13:33601450-33601202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               103, 71
               

               Conread position:
               535-784
               

               Cow position:
               chr13:57986152-57985907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               228, 19
               

               Conread position:
               535-819
               

               Cow position:
               chr13:7333233-7332938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               89, 42
               

               Conread position:
               535-844
               

               Cow position:
               chr13:21170307-21170616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               101, 132
               

               Conread position:
               535-848
               

               Cow position:
               chr13:28500288-28499966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 209
               

               Conread position:
               535-849
               

               Cow position:
               chr13:620469-620158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 98
               

               Conread position:
               535-873
               

               Cow position:
               chr13:13088811-13089146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 130
               

               Conread position:
               535-873
               

               Cow position:
               chr13:23512160-23512494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               274, 17
               

               Conread position:
               535-874
               

               Cow position:
               chr13:19364023-19364372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               535-874
               

               Cow position:
               chr13:20473898-20473563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 90
               

               Conread position:
               535-875
               

               Cow position:
               chr13:13260771-13261133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               535-875
               

               Cow position:
               chr13:20821057-20820707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               535-876
               

               Cow position:
               chr13:17569318-17568969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               249
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               101, 44
               

               Conread position:
               535-877
               

               Cow position:
               chr13:1958805-1959138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               230, 17
               

               Conread position:
               535-883
               

               Cow position:
               chr13:57002501-57002865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               84, 107
               

               Conread position:
               535-886
               

               Cow position:
               chr13:19610785-19610439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 134
               

               Conread position:
               535-886
               

               Cow position:
               chr13:20579697-20580046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               268, 45
               

               Conread position:
               535-887
               

               Cow position:
               chr13:18166511-18166876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 137
               

               Conread position:
               535-888
               

               Cow position:
               chr13:17159103-17158734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 138
               

               Conread position:
               536-816
               

               Cow position:
               chr13:19427415-19427699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 16
               

               Conread position:
               536-827
               

               Cow position:
               chr13:19582301-19582015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               536-865
               

               Cow position:
               chr13:15194941-15194613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               207, 91
               

               Conread position:
               536-870
               

               Cow position:
               chr13:44278126-44278476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               78, 29
               

               Conread position:
               537-711
               

               Cow position:
               chr13:43576792-43576971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               537-734
               

               Cow position:
               chr13:30396500-30396687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               537-774
               

               Cow position:
               chr13:21981189-21980955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               99, 128
               

               Conread position:
               537-807
               

               Cow position:
               chr13:52641169-52640900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 17
               

               Conread position:
               537-827
               

               Cow position:
               chr13:16038502-16038221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               101, 122
               

               Conread position:
               537-827
               

               Cow position:
               chr13:21127560-21127270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               537-827
               

               Cow position:
               chr13:25537418-25537698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               232, 53
               

               Conread position:
               537-827
               

               Cow position:
               chr13:34261016-34261302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 78
               

               Conread position:
               537-870
               

               Cow position:
               chr13:20893862-20893512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 17
               

               Conread position:
               537-875
               

               Cow position:
               chr13:2773897-2774256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               537-875
               

               Cow position:
               chr13:21275637-21275984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               537-875
               

               Cow position:
               chr13:32282908-32283253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               537-875
               

               Cow position:
               chr13:37775425-37775098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               67, 131
               

               Conread position:
               537-887
               

               Cow position:
               chr13:52893930-52894290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               538-887
               

               Cow position:
               chr13:34281463-34281816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               94, 64
               

               Conread position:
               540-734
               

               Cow position:
               chr13:24094533-24094337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 132
               

               Conread position:
               540-782
               

               Cow position:
               chr13:45439316-45439554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               85, 123
               

               Conread position:
               540-827
               

               Cow position:
               chr13:7149021-7149300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               172, 40
               

               Conread position:
               540-861
               

               Cow position:
               chr13:45074119-45073811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 73
               

               Conread position:
               540-864
               

               Cow position:
               chr13:21136128-21135782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               70, 136
               

               Conread position:
               540-874
               

               Cow position:
               chr13:53573762-53574098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               96, 35
               

               Conread position:
               540-875
               

               Cow position:
               chr13:52749679-52749349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               540-875
               

               Cow position:
               chr13:57475633-57475287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               114, 84
               

               Conread position:
               540-886
               

               Cow position:
               chr13:19223435-19223786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               85, 133
               

               Conread position:
               541-683
               

               Cow position:
               chr13:26097968-26098110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 126
               

               Conread position:
               541-693
               

               Cow position:
               chr13:47651630-47651477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               541-715
               

               Cow position:
               chr13:10986723-10986540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 129
               

               Conread position:
               541-722
               

               Cow position:
               chr13:15061705-15061517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 39
               

               Conread position:
               541-726
               

               Cow position:
               chr13:24107760-24107574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 13
               

               Conread position:
               541-748
               

               Cow position:
               chr13:8450118-8450324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               71, 130
               

               Conread position:
               541-748
               

               Cow position:
               chr13:17813256-17813465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               541-778
               

               Cow position:
               chr13:47243767-47243530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               541-807
               

               Cow position:
               chr13:16020644-16020902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               206, 90
               

               Conread position:
               541-816
               

               Cow position:
               chr13:11231512-11231249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               541-819
               

               Cow position:
               chr13:62007892-62008176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 122
               

               Conread position:
               541-826
               

               Cow position:
               chr13:9975283-9975005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               267, 70
               

               Conread position:
               541-827
               

               Cow position:
               chr13:4552611-4552873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               95, 18
               

               Conread position:
               541-827
               

               Cow position:
               chr13:13533877-13533598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               97, 125
               

               Conread position:
               541-827
               

               Cow position:
               chr13:45073461-45073185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               142, 33
               

               Conread position:
               541-827
               

               Cow position:
               chr13:46515844-46516132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 29
               

               Conread position:
               541-827
               

               Cow position:
               chr13:56035072-56034787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               93, 126
               

               Conread position:
               541-827
               

               Cow position:
               chr13:58524727-58525004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               267, 68
               

               Conread position:
               541-866
               

               Cow position:
               chr13:49023081-49022754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 129
               

               Conread position:
               541-869
               

               Cow position:
               chr13:60375703-60375365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               69, 130
               

               Conread position:
               541-870
               

               Cow position:
               chr13:15193103-15192766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               65, 129
               

               Conread position:
               541-873
               

               Cow position:
               chr13:17821473-17821141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               267, 70
               

               Conread position:
               541-873
               

               Cow position:
               chr13:24715034-24715371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               172, 92
               

               Conread position:
               541-874
               

               Cow position:
               chr13:19883249-19882908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 126
               

               Conread position:
               541-874
               

               Cow position:
               chr13:42200405-42200746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 127
               

               Conread position:
               541-874
               

               Cow position:
               chr13:52055808-52055471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               541-875
               

               Cow position:
               chr13:12670667-12670319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               85, 47
               

               Conread position:
               541-875
               

               Cow position:
               chr13:12745476-12745800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               166, 12
               

               Conread position:
               541-875
               

               Cow position:
               chr13:17114596-17114250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               83, 121
               

               Conread position:
               541-875
               

               Cow position:
               chr13:41806561-41806904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 40
               

               Conread position:
               541-875
               

               Cow position:
               chr13:46525644-46525316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               78, 131
               

               Conread position:
               541-875
               

               Cow position:
               chr13:56686228-56686561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               267, 28
               

               Conread position:
               541-884
               

               Cow position:
               chr13:21280716-21280348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 193
               

               Conread position:
               541-887
               

               Cow position:
               chr13:14063736-14063382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 128
               

               Conread position:
               541-887
               

               Cow position:
               chr13:25817314-25817663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 126
               

               Conread position:
               541-887
               

               Cow position:
               chr13:51528653-51528305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               109, 33
               

               Conread position:
               542-819
               

               Cow position:
               chr13:20314839-20314555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               41, 133
               

               Conread position:
               543-874
               

               Cow position:
               chr13:61977171-61976837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               119, 97
               

               Conread position:
               548-875
               

               Cow position:
               chr13:55582988-55583325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               549-724
               

               Cow position:
               chr13:18970777-18970946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               549-870
               

               Cow position:
               chr13:37803672-37804003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               549-875
               

               Cow position:
               chr13:3160195-3160520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               156, 87
               

               Conread position:
               549-875
               

               Cow position:
               chr13:27525466-27525136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               550-659
               

               Cow position:
               chr13:30809581-30809465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               550-706
               

               Cow position:
               chr13:22729612-22729450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 123
               

               Conread position:
               550-716
               

               Cow position:
               chr13:24796677-24796840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               550-728
               

               Cow position:
               chr13:23975372-23975193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               113, 83
               

               Conread position:
               550-731
               

               Cow position:
               chr13:369332-369146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               62, 115
               

               Conread position:
               550-734
               

               Cow position:
               chr13:11410502-11410694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               550-734
               

               Cow position:
               chr13:20042470-20042285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 117
               

               Conread position:
               550-734
               

               Cow position:
               chr13:52913670-52913853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 71
               

               Conread position:
               550-761
               

               Cow position:
               chr13:49356255-49356042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               550-766
               

               Cow position:
               chr13:2776078-2776300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 118
               

               Conread position:
               550-767
               

               Cow position:
               chr13:16476647-16476872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               550-772
               

               Cow position:
               chr13:40541315-40541086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 116
               

               Conread position:
               550-793
               

               Cow position:
               chr13:41157191-41157440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 126
               

               Conread position:
               550-816
               

               Cow position:
               chr13:18197814-18197546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               67, 114
               

               Conread position:
               550-824
               

               Cow position:
               chr13:54128804-54128524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               550-825
               

               Cow position:
               chr13:20115038-20115321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 126
               

               Conread position:
               550-825
               

               Cow position:
               chr13:46043968-46044229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               201, 86
               

               Conread position:
               550-827
               

               Cow position:
               chr13:1231436-1231718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               115, 86
               

               Conread position:
               550-827
               

               Cow position:
               chr13:17338219-17338507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 116
               

               Conread position:
               550-827
               

               Cow position:
               chr13:37593152-37592871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               70, 26
               

               Conread position:
               550-847
               

               Cow position:
               chr13:6860969-6861274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               67, 125
               

               Conread position:
               550-867
               

               Cow position:
               chr13:38697851-38698173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 24
               

               Conread position:
               550-869
               

               Cow position:
               chr13:9906522-9906856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               64, 125
               

               Conread position:
               550-870
               

               Cow position:
               chr13:8362953-8362626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               66, 122
               

               Conread position:
               550-875
               

               Cow position:
               chr13:311226-311559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               58, 124
               

               Conread position:
               550-875
               

               Cow position:
               chr13:10989280-10988946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               90, 123
               

               Conread position:
               550-875
               

               Cow position:
               chr13:19188108-19188430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               52, 85
               

               Conread position:
               550-875
               

               Cow position:
               chr13:20174531-20174879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               17, 227
               

               Conread position:
               550-875
               

               Cow position:
               chr13:20360069-20360399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               65, 126
               

               Conread position:
               550-875
               

               Cow position:
               chr13:43595311-43594983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               550-875
               

               Cow position:
               chr13:44003493-44003851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               550-876
               

               Cow position:
               chr13:151764-152084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               550-876
               

               Cow position:
               chr13:13501817-13501493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               88, 62
               

               Conread position:
               550-883
               

               Cow position:
               chr13:33256291-33256633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               69, 123
               

               Conread position:
               551-709
               

               Cow position:
               chr13:37405509-37405666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               86, 39
               

               Conread position:
               551-722
               

               Cow position:
               chr13:5092600-5092426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               66, 113
               

               Conread position:
               551-728
               

               Cow position:
               chr13:6113737-6113552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 124
               

               Conread position:
               551-732
               

               Cow position:
               chr13:30148760-30148585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               551-733
               

               Cow position:
               chr13:45499026-45499208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               551-778
               

               Cow position:
               chr13:40154945-40154706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               59, 128
               

               Conread position:
               551-789
               

               Cow position:
               chr13:14035204-14034963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 91
               

               Conread position:
               551-826
               

               Cow position:
               chr13:28291115-28291396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               551-827
               

               Cow position:
               chr13:25978399-25978119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               69, 104
               

               Conread position:
               551-870
               

               Cow position:
               chr13:17438067-17437744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               39, 194
               

               Conread position:
               551-874
               

               Cow position:
               chr13:38284177-38283858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               551-875
               

               Cow position:
               chr13:25604811-25604497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 90
               

               Conread position:
               551-876
               

               Cow position:
               chr13:6442312-6441970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               66, 53
               

               Conread position:
               552-645
               

               Cow position:
               chr13:47634037-47634130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               552-650
               

               Cow position:
               chr13:13801105-13801201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               552-704
               

               Cow position:
               chr13:6951376-6951529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               552-707
               

               Cow position:
               chr13:53619796-53619957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 121
               

               Conread position:
               552-708
               

               Cow position:
               chr13:7097382-7097541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 116
               

               Conread position:
               552-708
               

               Cow position:
               chr13:41979341-41979191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 65
               

               Conread position:
               552-710
               

               Cow position:
               chr13:3594128-3594277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               552-710
               

               Cow position:
               chr13:13265360-13265517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 114
               

               Conread position:
               552-710
               

               Cow position:
               chr13:26395255-26395417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               552-710
               

               Cow position:
               chr13:28081512-28081678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               60, 123
               

               Conread position:
               552-710
               

               Cow position:
               chr13:57322945-57323102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 114
               

               Conread position:
               552-724
               

               Cow position:
               chr13:22345479-22345304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 121
               

               Conread position:
               552-727
               

               Cow position:
               chr13:9492572-9492743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               552-730
               

               Cow position:
               chr13:37555075-37554898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 115
               

               Conread position:
               552-732
               

               Cow position:
               chr13:3153543-3153728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               67, 113
               

               Conread position:
               552-734
               

               Cow position:
               chr13:2338989-2339157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               552-741
               

               Cow position:
               chr13:11565635-11565823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               84, 118
               

               Conread position:
               552-741
               

               Cow position:
               chr13:18093073-18092888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               79, 56
               

               Conread position:
               552-741
               

               Cow position:
               chr13:49283982-49283793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               84, 114
               

               Conread position:
               552-744
               

               Cow position:
               chr13:57770187-57769999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 72
               

               Conread position:
               552-757
               

               Cow position:
               chr13:52536367-52536568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               552-761
               

               Cow position:
               chr13:15144035-15143836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               552-761
               

               Cow position:
               chr13:16908009-16908224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               60, 121
               

               Conread position:
               552-762
               

               Cow position:
               chr13:8699947-8699729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               60, 123
               

               Conread position:
               552-767
               

               Cow position:
               chr13:14644849-14645065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               86, 115
               

               Conread position:
               552-770
               

               Cow position:
               chr13:7046676-7046886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               82, 56
               

               Conread position:
               552-772
               

               Cow position:
               chr13:54145685-54145458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 104
               

               Conread position:
               552-774
               

               Cow position:
               chr13:19598869-19598646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               56, 117
               

               Conread position:
               552-775
               

               Cow position:
               chr13:17089717-17089499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               552-779
               

               Cow position:
               chr13:33974542-33974756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               552-783
               

               Cow position:
               chr13:84387-84609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               191, 28
               

               Conread position:
               552-798
               

               Cow position:
               chr13:55494723-55494479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               552-806
               

               Cow position:
               chr13:38035635-38035886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               72, 116
               

               Conread position:
               552-807
               

               Cow position:
               chr13:17350139-17350403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               48, 123
               

               Conread position:
               552-808
               

               Cow position:
               chr13:35557315-35557054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               60, 117
               

               Conread position:
               552-814
               

               Cow position:
               chr13:12673492-12673240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               65, 90
               

               Conread position:
               552-817
               

               Cow position:
               chr13:18181955-18181713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               552-819
               

               Cow position:
               chr13:15239716-15239456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 119
               

               Conread position:
               552-825
               

               Cow position:
               chr13:15756912-15757190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 231
               

               Conread position:
               552-827
               

               Cow position:
               chr13:4665054-4664794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               256, 59
               

               Conread position:
               552-827
               

               Cow position:
               chr13:10040760-10040463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               86, 62
               

               Conread position:
               552-827
               

               Cow position:
               chr13:34729045-34728770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               552-827
               

               Cow position:
               chr13:36876861-36877144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               552-827
               

               Cow position:
               chr13:47322596-47322333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               221, 11
               

               Conread position:
               552-827
               

               Cow position:
               chr13:49795834-49796088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               256, 72
               

               Conread position:
               552-827
               

               Cow position:
               chr13:52477849-52477574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               552-852
               

               Cow position:
               chr13:37985952-37985653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               552-853
               

               Cow position:
               chr13:17977138-17977447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 155
               

               Conread position:
               552-862
               

               Cow position:
               chr13:6189804-6189500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               71, 120
               

               Conread position:
               552-865
               

               Cow position:
               chr13:18058451-18058127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 91
               

               Conread position:
               552-866
               

               Cow position:
               chr13:26742921-26743246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 104
               

               Conread position:
               552-869
               

               Cow position:
               chr13:1568730-1569046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 115
               

               Conread position:
               552-869
               

               Cow position:
               chr13:22085936-22085621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 20
               

               Conread position:
               552-869
               

               Cow position:
               chr13:34995516-34995206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               158, 55
               

               Conread position:
               552-870
               

               Cow position:
               chr13:5758536-5758217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               552-870
               

               Cow position:
               chr13:21288289-21287963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               80, 117
               

               Conread position:
               552-870
               

               Cow position:
               chr13:25435310-25434996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               215, 58
               

               Conread position:
               552-870
               

               Cow position:
               chr13:35659550-35659877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               28, 123
               

               Conread position:
               552-870
               

               Cow position:
               chr13:44201805-44202116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               67, 101
               

               Conread position:
               552-874
               

               Cow position:
               chr13:12989658-12989972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               241, 44
               

               Conread position:
               552-874
               

               Cow position:
               chr13:15257571-15257254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               552-874
               

               Cow position:
               chr13:18851884-18852208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               84, 58
               

               Conread position:
               552-874
               

               Cow position:
               chr13:24585844-24586169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               58, 116
               

               Conread position:
               552-874
               

               Cow position:
               chr13:25926584-25926920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               78, 115
               

               Conread position:
               552-874
               

               Cow position:
               chr13:44322688-44323028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               60, 117
               

               Conread position:
               552-874
               

               Cow position:
               chr13:48597705-48598038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               113, 178
               

               Conread position:
               552-875
               

               Cow position:
               chr13:6079607-6079290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               256, 65
               

               Conread position:
               552-875
               

               Cow position:
               chr13:13320593-13320913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 117
               

               Conread position:
               552-875
               

               Cow position:
               chr13:15289123-15288800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 115
               

               Conread position:
               552-875
               

               Cow position:
               chr13:17021930-17021600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               11, 121
               

               Conread position:
               552-875
               

               Cow position:
               chr13:19022060-19022404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               552-875
               

               Cow position:
               chr13:38329414-38329755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 113
               

               Conread position:
               552-875
               

               Cow position:
               chr13:54582670-54583006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               71, 120
               

               Conread position:
               552-875
               

               Cow position:
               chr13:54701977-54702316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               552-875
               

               Cow position:
               chr13:58763813-58763503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               552-876
               

               Cow position:
               chr13:21242280-21241963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 59
               

               Conread position:
               552-877
               

               Cow position:
               chr13:19393092-19393420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               552-877
               

               Cow position:
               chr13:21106939-21107269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               55, 119
               

               Conread position:
               552-877
               

               Cow position:
               chr13:55674414-55674078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 122
               

               Conread position:
               552-886
               

               Cow position:
               chr13:15974414-15974755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               70, 111
               

               Conread position:
               552-887
               

               Cow position:
               chr13:6973958-6974304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               552-887
               

               Cow position:
               chr13:20784390-20784730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 113
               

               Conread position:
               552-887
               

               Cow position:
               chr13:41155259-41154890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               71, 168
               

               Conread position:
               552-887
               

               Cow position:
               chr13:54094623-54094952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               256, 58
               

               Conread position:
               553-709
               

               Cow position:
               chr13:8240475-8240618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               553-722
               

               Cow position:
               chr13:9327295-9327121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 53
               

               Conread position:
               553-734
               

               Cow position:
               chr13:31507645-31507464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               553-741
               

               Cow position:
               chr13:21902201-21902379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               553-825
               

               Cow position:
               chr13:15621606-15621884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               74, 173
               

               Conread position:
               553-825
               

               Cow position:
               chr13:46111765-46112036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               53, 109
               

               Conread position:
               553-831
               

               Cow position:
               chr13:20217601-20217317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 116
               

               Conread position:
               553-836
               

               Cow position:
               chr13:1147354-1147071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               59, 117
               

               Conread position:
               553-873
               

               Cow position:
               chr13:38873160-38872841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               56, 173
               

               Conread position:
               553-875
               

               Cow position:
               chr13:26698700-26698368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               69, 115
               

               Conread position:
               553-875
               

               Cow position:
               chr13:33054576-33054266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 184
               

               Conread position:
               553-875
               

               Cow position:
               chr13:47007916-47007601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               251, 94
               

               Conread position:
               554-692
               

               Cow position:
               chr13:16106219-16106352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               554-699
               

               Cow position:
               chr13:56432023-56431880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 57
               

               Conread position:
               554-707
               

               Cow position:
               chr13:27198712-27198861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 20
               

               Conread position:
               554-708
               

               Cow position:
               chr13:16525430-16525269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 121
               

               Conread position:
               554-710
               

               Cow position:
               chr13:55713627-55713480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               554-724
               

               Cow position:
               chr13:52027338-52027167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               554-733
               

               Cow position:
               chr13:4404332-4404510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 48
               

               Conread position:
               554-736
               

               Cow position:
               chr13:21188180-21188350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               554-740
               

               Cow position:
               chr13:33854883-33854698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               554-743
               

               Cow position:
               chr13:56535265-56535442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               554-762
               

               Cow position:
               chr13:18615169-18615392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 131
               

               Conread position:
               554-777
               

               Cow position:
               chr13:18340328-18340557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               27, 118
               

               Conread position:
               554-808
               

               Cow position:
               chr13:17611753-17611499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               70, 117
               

               Conread position:
               554-809
               

               Cow position:
               chr13:25504333-25504585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               554-810
               

               Cow position:
               chr13:21171774-21171519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 118
               

               Conread position:
               554-813
               

               Cow position:
               chr13:12925594-12925831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 42
               

               Conread position:
               554-827
               

               Cow position:
               chr13:12206859-12207115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               254, 56
               

               Conread position:
               554-827
               

               Cow position:
               chr13:15195403-15195138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               92, 111
               

               Conread position:
               554-827
               

               Cow position:
               chr13:20137615-20137896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 115
               

               Conread position:
               554-837
               

               Cow position:
               chr13:20868948-20868673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 63
               

               Conread position:
               554-839
               

               Cow position:
               chr13:20534698-20534974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               554-850
               

               Cow position:
               chr13:7265308-7265021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               189, 54
               

               Conread position:
               554-865
               

               Cow position:
               chr13:19278893-19279209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               554-866
               

               Cow position:
               chr13:5671788-5671472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               554-870
               

               Cow position:
               chr13:20288136-20288454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               58, 115
               

               Conread position:
               554-873
               

               Cow position:
               chr13:15991433-15991100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               554-874
               

               Cow position:
               chr13:6540503-6540184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               197, 60
               

               Conread position:
               554-875
               

               Cow position:
               chr13:5263481-5263160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 113
               

               Conread position:
               554-875
               

               Cow position:
               chr13:8374963-8374643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 72
               

               Conread position:
               554-875
               

               Cow position:
               chr13:11260075-11260398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 113
               

               Conread position:
               554-875
               

               Cow position:
               chr13:15868907-15869250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               53, 114
               

               Conread position:
               554-875
               

               Cow position:
               chr13:20839378-20839692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               254, 59
               

               Conread position:
               554-875
               

               Cow position:
               chr13:26480405-26480084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               554-875
               

               Cow position:
               chr13:37069139-37069478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 119
               

               Conread position:
               554-875
               

               Cow position:
               chr13:60966577-60966896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               208, 63
               

               Conread position:
               554-878
               

               Cow position:
               chr13:6663958-6663619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               554-883
               

               Cow position:
               chr13:10845416-10845730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               243, 81
               

               Conread position:
               554-886
               

               Cow position:
               chr13:5279409-5279044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               7, 119
               

               Conread position:
               554-886
               

               Cow position:
               chr13:24753691-24754022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 72
               

               Conread position:
               554-887
               

               Cow position:
               chr13:29831629-29831291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 71
               

               Conread position:
               554-887
               

               Cow position:
               chr13:35526396-35526071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               555-718
               

               Cow position:
               chr13:57446314-57446157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               555-725
               

               Cow position:
               chr13:1339346-1339170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               64, 118
               

               Conread position:
               555-726
               

               Cow position:
               chr13:8537617-8537795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               62, 118
               

               Conread position:
               555-728
               

               Cow position:
               chr13:6976042-6975871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 13
               

               Conread position:
               555-767
               

               Cow position:
               chr13:12974614-12974828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               555-789
               

               Cow position:
               chr13:6926311-6926550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               70, 119
               

               Conread position:
               555-818
               

               Cow position:
               chr13:6980724-6980971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               253, 108
               

               Conread position:
               555-826
               

               Cow position:
               chr13:20271432-20271157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               555-827
               

               Cow position:
               chr13:19240238-19240507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 41
               

               Conread position:
               555-854
               

               Cow position:
               chr13:8667414-8667721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 118
               

               Conread position:
               555-871
               

               Cow position:
               chr13:48165624-48165300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               555-875
               

               Cow position:
               chr13:18929324-18929660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 118
               

               Conread position:
               555-875
               

               Cow position:
               chr13:37818945-37818620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               555-875
               

               Cow position:
               chr13:45023424-45023083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 161
               

               Conread position:
               556-694
               

               Cow position:
               chr13:25313349-25313209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               556-719
               

               Cow position:
               chr13:6865864-6865700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               556-823
               

               Cow position:
               chr13:37521949-37521676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               33, 106
               

               Conread position:
               556-875
               

               Cow position:
               chr13:21235868-21235558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               52, 110
               

               Conread position:
               556-875
               

               Cow position:
               chr13:24369385-24369709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               556-875
               

               Cow position:
               chr13:26261992-26261669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 117
               

               Conread position:
               556-875
               

               Cow position:
               chr13:33352565-33352238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               56, 169
               

               Conread position:
               556-875
               

               Cow position:
               chr13:43479861-43480186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               45, 112
               

               Conread position:
               557-699
               

               Cow position:
               chr13:23478701-23478847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               557-709
               

               Cow position:
               chr13:55143075-55143228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               51, 110
               

               Conread position:
               557-741
               

               Cow position:
               chr13:20090566-20090392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               56, 111
               

               Conread position:
               557-759
               

               Cow position:
               chr13:20795407-20795204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 85
               

               Conread position:
               557-776
               

               Cow position:
               chr13:15083462-15083681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               53, 118
               

               Conread position:
               557-826
               

               Cow position:
               chr13:19779054-19778778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 185
               

               Conread position:
               557-865
               

               Cow position:
               chr13:18994923-18995247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 121
               

               Conread position:
               557-866
               

               Cow position:
               chr13:11808382-11808678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               79, 20
               

               Conread position:
               557-883
               

               Cow position:
               chr13:49804789-49805108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               258, 17
               

               Conread position:
               558-823
               

               Cow position:
               chr13:5906836-5906569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 175
               

               Conread position:
               558-887
               

               Cow position:
               chr13:9142075-9142432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               52, 104
               

               Conread position:
               559-708
               

               Cow position:
               chr13:16714463-16714311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 111
               

               Conread position:
               559-861
               

               Cow position:
               chr13:54389215-54388904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               562-747
               

               Cow position:
               chr13:38703069-38702882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               563-761
               

               Cow position:
               chr13:7104462-7104661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 104
               

               Conread position:
               563-871
               

               Cow position:
               chr13:52228291-52227975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 104
               

               Conread position:
               563-875
               

               Cow position:
               chr13:38012146-38012486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               180, 62
               

               Conread position:
               564-711
               

               Cow position:
               chr13:1037445-1037596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               56, 106
               

               Conread position:
               564-728
               

               Cow position:
               chr13:16163396-16163556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 13
               

               Conread position:
               565-871
               

               Cow position:
               chr13:37381613-37381931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               565-875
               

               Cow position:
               chr13:24230018-24230341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 112
               

               Conread position:
               565-887
               

               Cow position:
               chr13:34263564-34263227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 110
               

               Conread position:
               566-820
               

               Cow position:
               chr13:13211698-13211951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 58
               

               Conread position:
               566-887
               

               Cow position:
               chr13:20606311-20605979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 112
               

               Conread position:
               568-719
               

               Cow position:
               chr13:52249233-52249083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               569-742
               

               Cow position:
               chr13:9391377-9391547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               569-886
               

               Cow position:
               chr13:47964360-47964056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               239, 42
               

               Conread position:
               570-731
               

               Cow position:
               chr13:10711601-10711438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               53, 96
               

               Conread position:
               570-875
               

               Cow position:
               chr13:14927076-14927364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 99
               

               Conread position:
               574-823
               

               Cow position:
               chr13:7190785-7191044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               575-875
               

               Cow position:
               chr13:20666567-20666260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 94
               

               Conread position:
               575-875
               

               Cow position:
               chr13:23478847-23479155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               578-857
               

               Cow position:
               chr13:15964120-15964421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               579-710
               

               Cow position:
               chr13:13286548-13286423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               580-827
               

               Cow position:
               chr13:40722869-40722636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               226, 47
               

               Conread position:
               580-875
               

               Cow position:
               chr13:11321785-11321487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 34
               

               Conread position:
               584-731
               

               Cow position:
               chr13:16790041-16790186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               585-877
               

               Cow position:
               chr13:52057386-52057675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               586-806
               

               Cow position:
               chr13:8232839-8233044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               586-875
               

               Cow position:
               chr13:18491428-18491731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               52, 74
               

               Conread position:
               591-827
               

               Cow position:
               chr13:46736053-46736284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               600-867
               

               Cow position:
               chr13:28683212-28683483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               226, 21
               

               Conread position:
               602-803
               

               Cow position:
               chr13:52586186-52585988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               141, 65
               

               Conread position:
               602-875
               

               Cow position:
               chr13:21283858-21283581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 72
               

               Conread position:
               603-866
               

               Cow position:
               chr13:62518475-62518212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               198, 14
               

               Conread position:
               603-875
               

               Cow position:
               chr13:53566452-53566724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 65
               

               Conread position:
               607-868
               

               Cow position:
               chr13:1043109-1042843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               200, 34
               

               Conread position:
               608-875
               

               Cow position:
               chr13:60973933-60974212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               5, 62
               

               Conread position:
               609-767
               

               Cow position:
               chr13:42640241-42640395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               609-778
               

               Cow position:
               chr13:37621502-37621336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               609-817
               

               Cow position:
               chr13:17837806-17838011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               609-827
               

               Cow position:
               chr13:13297534-13297747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               25, 59
               

               Conread position:
               609-827
               

               Cow position:
               chr13:37640447-37640656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               199, 49
               

               Conread position:
               609-827
               

               Cow position:
               chr13:51901439-51901664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               609-870
               

               Cow position:
               chr13:36771564-36771295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               609-873
               

               Cow position:
               chr13:7076112-7076384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               609-874
               

               Cow position:
               chr13:2404617-2404867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               219, 29
               

               Conread position:
               609-874
               

               Cow position:
               chr13:51116170-51115900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               609-875
               

               Cow position:
               chr13:11381869-11381593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               609-875
               

               Cow position:
               chr13:15282079-15281808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               609-875
               

               Cow position:
               chr13:17439913-17439641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               609-875
               

               Cow position:
               chr13:17971174-17970899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 61
               

               Conread position:
               609-875
               

               Cow position:
               chr13:46181652-46181918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               195, 29
               

               Conread position:
               609-876
               

               Cow position:
               chr13:55316342-55316059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               29, 174
               

               Conread position:
               609-886
               

               Cow position:
               chr13:9265971-9265691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               30, 60
               

               Conread position:
               609-887
               

               Cow position:
               chr13:3315820-3315538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               609-887
               

               Cow position:
               chr13:61990465-61990192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               199, 23
               

               Conread position:
               609-888
               

               Cow position:
               chr13:20706350-20706065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               611-886
               

               Cow position:
               chr13:17622148-17622422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               612-784
               

               Cow position:
               chr13:43525376-43525205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               612-829
               

               Cow position:
               chr13:5005860-5006066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               612-846
               

               Cow position:
               chr13:56148379-56148613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               612-846
               

               Cow position:
               chr13:56160588-56160354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               612-874
               

               Cow position:
               chr13:23856069-23856340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               612-875
               

               Cow position:
               chr13:18696699-18696971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               612-877
               

               Cow position:
               chr13:56155291-56155028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               613-875
               

               Cow position:
               chr13:10929129-10928865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               613-875
               

               Cow position:
               chr13:43185021-43184744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               25, 53
               

               Conread position:
               614-778
               

               Cow position:
               chr13:21294935-21295098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               614-814
               

               Cow position:
               chr13:24110340-24110543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               24, 57
               

               Conread position:
               614-823
               

               Cow position:
               chr13:17563600-17563804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               614-866
               

               Cow position:
               chr13:18172196-18172458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               614-870
               

               Cow position:
               chr13:11096042-11096301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               194, 24
               

               Conread position:
               614-875
               

               Cow position:
               chr13:2413889-2414159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               614-875
               

               Cow position:
               chr13:11060847-11061116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 57
               

               Conread position:
               614-875
               

               Cow position:
               chr13:20562857-20563125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               195, 12
               

               Conread position:
               616-875
               

               Cow position:
               chr13:8524749-8524492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 27
               

               Conread position:
               617-823
               

               Cow position:
               chr13:3211412-3211619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               617-864
               

               Cow position:
               chr13:37981878-37981629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               142, 50
               

               Conread position:
               617-874
               

               Cow position:
               chr13:15144499-15144244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               209, 34
               

               Conread position:
               618-886
               

               Cow position:
               chr13:60430211-60429933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               127, 50
               

               Conread position:
               619-830
               

               Cow position:
               chr13:38278282-38278074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               7, 51
               

               Conread position:
               619-869
               

               Cow position:
               chr13:43762034-43762292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               619-870
               

               Cow position:
               chr13:9644015-9643762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               197, 21
               

               Conread position:
               619-870
               

               Cow position:
               chr13:45725751-45726020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 89
               

               Conread position:
               619-873
               

               Cow position:
               chr13:39367824-39368082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               619-875
               

               Cow position:
               chr13:4420207-4420476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               620-875
               

               Cow position:
               chr13:37484411-37484145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               621-835
               

               Cow position:
               chr13:43829110-43829321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               8, 41
               

               Conread position:
               621-874
               

               Cow position:
               chr13:5082521-5082778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               184, 47
               

               Conread position:
               622-857
               

               Cow position:
               chr13:17110095-17110323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               622-873
               

               Cow position:
               chr13:48037491-48037748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               622-874
               

               Cow position:
               chr13:20650114-20649851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               622-877
               

               Cow position:
               chr13:15166689-15166950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               163, 45
               

               Conread position:
               623-850
               

               Cow position:
               chr13:8355077-8355301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               201, 44
               

               Conread position:
               624-875
               

               Cow position:
               chr13:21176449-21176193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               625-874
               

               Cow position:
               chr13:23270334-23270083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               626-864
               

               Cow position:
               chr13:15885148-15884902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               626-874
               

               Cow position:
               chr13:43194041-43194303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               626-875
               

               Cow position:
               chr13:31813747-31814000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               627-787
               

               Cow position:
               chr13:31529753-31529909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               628-875
               

               Cow position:
               chr13:17966335-17966080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               630-854
               

               Cow position:
               chr13:20679218-20679438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               178, 37
               

               Conread position:
               631-873
               

               Cow position:
               chr13:43869233-43868989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               169, 27
               

               Conread position:
               632-886
               

               Cow position:
               chr13:6153903-6153642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               176, 35
               

               Conread position:
               632-888
               

               Cow position:
               chr13:7663541-7663283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               196, 35
               

               Conread position:
               635-804
               

               Cow position:
               chr13:60393668-60393830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               635-816
               

               Cow position:
               chr13:25428339-25428167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               174, 32
               

               Conread position:
               635-825
               

               Cow position:
               chr13:185414-185601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               109, 32
               

               Conread position:
               635-827
               

               Cow position:
               chr13:19320416-19320607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               635-865
               

               Cow position:
               chr13:890288-890053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               194, 76
               

               Conread position:
               635-869
               

               Cow position:
               chr13:12202246-12202489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               635-875
               

               Cow position:
               chr13:11460517-11460750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               193, 32
               

               Conread position:
               635-875
               

               Cow position:
               chr13:15902908-15903145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               170, 24
               

               Conread position:
               635-877
               

               Cow position:
               chr13:6061124-6060879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               193, 33
               

               Conread position:
               635-886
               

               Cow position:
               chr13:9593390-9593649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 17
               

               Conread position:
               635-886
               

               Cow position:
               chr13:52284700-52284950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               173, 16
               

               Conread position:
               635-887
               

               Cow position:
               chr13:8652558-8652292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               636-823
               

               Cow position:
               chr13:29123189-29123373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               636-866
               

               Cow position:
               chr13:13176535-13176771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               172, 31
               

               Conread position:
               636-887
               

               Cow position:
               chr13:15110199-15110462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               637-873
               

               Cow position:
               chr13:15529151-15528905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               639-827
               

               Cow position:
               chr13:34555940-34555760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               643-883
               

               Cow position:
               chr13:8201591-8201349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               85, 11
               

               Conread position:
               648-875
               

               Cow position:
               chr13:29630754-29630984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               649-874
               

               Cow position:
               chr13:25531892-25531660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 15
               

               Conread position:
               649-887
               

               Cow position:
               chr13:8839093-8838854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               170, 24
               

               Conread position:
               662-875
               

               Cow position:
               chr13:62474894-62474674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 124
               

               Conread position:
               669-874
               

               Cow position:
               chr13:15233841-15234042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               157, 87
               

               Conread position:
               669-875
               

               Cow position:
               chr13:61166535-61166329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               157, 33
               

               Conread position:
               670-827
               

               Cow position:
               chr13:60389572-60389420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               133, 94
               

               Conread position:
               670-877
               

               Cow position:
               chr13:18243778-18243994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               138, 96
               

               Conread position:
               671-886
               

               Cow position:
               chr13:6835878-6835664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               28, 95
               

               Conread position:
               673-827
               

               Cow position:
               chr13:16187977-16187825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               135, 91
               

               Conread position:
               682-871
               

               Cow position:
               chr13:24376421-24376614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               126, 90
               

               Conread position:
               690-870
               

               Cow position:
               chr13:16024525-16024715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               118, 79
               

               Conread position:
               720-886
               

               Cow position:
               chr13:5091703-5091524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               726-869
               

               Cow position:
               chr13:34052617-34052478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 43
               

               Conread position:
               732-873
               

               Cow position:
               chr13:6975817-6975666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               743-875
               

               Cow position:
               chr13:43839553-43839423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               65, 8
               
Show alignments to all cow chromosomes.
Conread position:	441-706
Cow position:	chr13:23823345-23823082 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	195
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	48, 30
Conread position:	507-759
Cow position:	chr13:50623060-50622808 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	179
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	47, 11
Conread position:	507-825
Cow position:	chr13:14411645-14411956 (view UCSC Genome Browser custom track)
Alignm length:	332
Alignm identity:	229
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	110, 33
Conread position:	511-875
Cow position:	chr13:28139340-28139695 (view UCSC Genome Browser custom track)
Alignm length:	377
Alignm identity:	251
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	71, 11
Conread position:	516-632
Cow position:	chr13:58421852-58421966 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	92
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	35, 0
Conread position:	516-710
Cow position:	chr13:21426059-21425874 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	145
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	12, 26
Conread position:	518-724
Cow position:	chr13:1363217-1363425 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	153
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	24, 103
Conread position:	519-875
Cow position:	chr13:25696001-25695639 (view UCSC Genome Browser custom track)
Alignm length:	376
Alignm identity:	256
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	85, 21
Conread position:	522-887
Cow position:	chr13:15041706-15041332 (view UCSC Genome Browser custom track)
Alignm length:	387
Alignm identity:	266
Alignm E-value:	9e-37
Alignm gaps (pig, cow):	93, 28
Conread position:	524-699
Cow position:	chr13:9108904-9108730 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	136
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	113, 142
Conread position:	524-875
Cow position:	chr13:49503772-49503403 (view UCSC Genome Browser custom track)
Alignm length:	376
Alignm identity:	259
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	14, 153
Conread position:	525-826
Cow position:	chr13:11820931-11821224 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	203
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	95, 15
Conread position:	525-886
Cow position:	chr13:12282606-12282975 (view UCSC Genome Browser custom track)
Alignm length:	382
Alignm identity:	257
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	197, 34
Conread position:	527-708
Cow position:	chr13:23399535-23399720 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	147
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	18, 144
Conread position:	527-737
Cow position:	chr13:52177374-52177582 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	154
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	85, 25
Conread position:	527-886
Cow position:	chr13:17292357-17291992 (view UCSC Genome Browser custom track)
Alignm length:	375
Alignm identity:	247
Alignm E-value:	5e-31
Alignm gaps (pig, cow):	107, 136
Conread position:	529-741
Cow position:	chr13:53850596-53850811 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	164
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	80, 11
Conread position:	529-748
Cow position:	chr13:37614421-37614196 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	176
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	83, 10
Conread position:	529-887
Cow position:	chr13:16247416-16247799 (view UCSC Genome Browser custom track)
Alignm length:	385
Alignm identity:	247
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	10, 206
Conread position:	530-709
Cow position:	chr13:37946611-37946434 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	131
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	101, 10