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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8017D19.3
        

               
Conread position:
               
513-708
               

               
Cow position:
               
chr14:24845793-24845978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
513-780
               

               
Cow position:
               
chr14:4848162-4848430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
517-835
               

               
Cow position:
               
chr14:40208726-40209034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
520-734
               

               
Cow position:
               
chr14:4491253-4491473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
522-827
               

               
Cow position:
               
chr14:28378179-28378489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
528-732
               

               
Cow position:
               
chr14:18270188-18270396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
91, 142
               

               
Conread position:
               
528-769
               

               
Cow position:
               
chr14:36425574-36425338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
528-886
               

               
Cow position:
               
chr14:6736038-6735662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
530-657
               

               
Cow position:
               
chr14:33462040-33462163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
530-716
               

               
Cow position:
               
chr14:30023370-30023178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 143
               

               
Conread position:
               
530-731
               

               
Cow position:
               
chr14:46431897-46432103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
530-732
               

               
Cow position:
               
chr14:8083026-8083234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
530-737
               

               
Cow position:
               
chr14:145680-145471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
530-763
               

               
Cow position:
               
chr14:18301789-18302027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
530-772
               

               
Cow position:
               
chr14:28923995-28924243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
530-818
               

               
Cow position:
               
chr14:12954546-12954263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr14:24236653-24237011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr14:35381419-35381776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
82, 137
               

               
Conread position:
               
530-876
               

               
Cow position:
               
chr14:14466630-14466291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
530-887
               

               
Cow position:
               
chr14:36437659-36437290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 150
               

               
Conread position:
               
531-762
               

               
Cow position:
               
chr14:5959163-5958922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
531-803
               

               
Cow position:
               
chr14:24527332-24527058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 252
               

               
Conread position:
               
531-825
               

               
Cow position:
               
chr14:41809823-41809529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
531-827
               

               
Cow position:
               
chr14:5025109-5025411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 247
               

               
Conread position:
               
531-827
               

               
Cow position:
               
chr14:6541894-6541595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
531-827
               

               
Cow position:
               
chr14:27823263-27823562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
531-875
               

               
Cow position:
               
chr14:4227392-4227017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
531-875
               

               
Cow position:
               
chr14:41749927-41749572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
531-878
               

               
Cow position:
               
chr14:15313390-15313743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
531-886
               

               
Cow position:
               
chr14:7290630-7290989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 134
               

               
Conread position:
               
531-886
               

               
Cow position:
               
chr14:12667560-12667928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
532-766
               

               
Cow position:
               
chr14:24712800-24712555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 149
               

               
Conread position:
               
532-802
               

               
Cow position:
               
chr14:44713248-44713518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
80, 141
               

               
Conread position:
               
532-803
               

               
Cow position:
               
chr14:29809124-29809402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
532-804
               

               
Cow position:
               
chr14:8923757-8923479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
532-865
               

               
Cow position:
               
chr14:24921930-24922279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
91, 140
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr14:48838423-48838781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 137
               

               
Conread position:
               
532-884
               

               
Cow position:
               
chr14:6600120-6599756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
532-884
               

               
Cow position:
               
chr14:15913723-15913352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
532-886
               

               
Cow position:
               
chr14:11043662-11043295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
532-886
               

               
Cow position:
               
chr14:20016878-20016504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
532-887
               

               
Cow position:
               
chr14:19851196-19850832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
532-887
               

               
Cow position:
               
chr14:37103039-37103407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
90, 146
               

               
Conread position:
               
533-634
               

               
Cow position:
               
chr14:23695299-23695400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
533-688
               

               
Cow position:
               
chr14:6389050-6388891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
533-721
               

               
Cow position:
               
chr14:21593168-21592977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
533-819
               

               
Cow position:
               
chr14:15944833-15944547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
533-824
               

               
Cow position:
               
chr14:10937503-10937818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
533-826
               

               
Cow position:
               
chr14:40474397-40474689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr14:11470317-11470020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
84, 142
               

               
Conread position:
               
533-870
               

               
Cow position:
               
chr14:13809787-13810119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 78
               

               
Conread position:
               
533-870
               

               
Cow position:
               
chr14:31130544-31130199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 139
               

               
Conread position:
               
533-886
               

               
Cow position:
               
chr14:35420929-35420563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
533-886
               

               
Cow position:
               
chr14:40230802-40230440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
534-700
               

               
Cow position:
               
chr14:37504346-37504518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 139
               

               
Conread position:
               
534-733
               

               
Cow position:
               
chr14:13516158-13515956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
534-733
               

               
Cow position:
               
chr14:18412760-18412555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 133
               

               
Conread position:
               
534-823
               

               
Cow position:
               
chr14:4282677-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
534-826
               

               
Cow position:
               
chr14:12244546-12244254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
534-869
               

               
Cow position:
               
chr14:10858276-10858612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
534-874
               

               
Cow position:
               
chr14:13845828-13846172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
534-875
               

               
Cow position:
               
chr14:38920791-38921135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
535-705
               

               
Cow position:
               
chr14:8591009-8590840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
535-710
               

               
Cow position:
               
chr14:32784283-32784102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
535-732
               

               
Cow position:
               
chr14:15428314-15428513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
535-734
               

               
Cow position:
               
chr14:27364413-27364614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
535-745
               

               
Cow position:
               
chr14:35421252-35421032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
535-750
               

               
Cow position:
               
chr14:33328801-33329013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
535-769
               

               
Cow position:
               
chr14:18559221-18558989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
535-776
               

               
Cow position:
               
chr14:12033410-12033162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 144
               

               
Conread position:
               
535-804
               

               
Cow position:
               
chr14:41838023-41837768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
535-807
               

               
Cow position:
               
chr14:7198330-7198610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
77, 138
               

               
Conread position:
               
535-820
               

               
Cow position:
               
chr14:41267887-41267629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
273, 20
               

               
Conread position:
               
535-826
               

               
Cow position:
               
chr14:7799753-7800042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
535-826
               

               
Cow position:
               
chr14:33229565-33229268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 150
               

               
Conread position:
               
535-826
               

               
Cow position:
               
chr14:45045431-45045727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
75, 111
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr14:7036525-7036226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
77, 137
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr14:12635040-12634758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
103, 6
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr14:41253144-41252860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
240, 74
               

               
Conread position:
               
535-845
               

               
Cow position:
               
chr14:13731261-13730942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
535-852
               

               
Cow position:
               
chr14:49817850-49817537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
535-866
               

               
Cow position:
               
chr14:44084641-44084302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
234, 73
               

               
Conread position:
               
535-869
               

               
Cow position:
               
chr14:26115894-26116241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
535-870
               

               
Cow position:
               
chr14:33457210-33456859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 137
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr14:109642-109322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr14:13042594-13042942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 132
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr14:13385201-13385556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
84, 137
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr14:14622333-14621988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 76
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr14:15997916-15997581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
223, 78
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr14:20110887-20110537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 135
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr14:23682103-23682449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
535-878
               

               
Cow position:
               
chr14:19321675-19321317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
74, 199
               

               
Conread position:
               
535-886
               

               
Cow position:
               
chr14:19852102-19851730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 166
               

               
Conread position:
               
535-886
               

               
Cow position:
               
chr14:32452085-32452451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr14:48741031-48740674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
536-744
               

               
Cow position:
               
chr14:15211770-15211973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
98, 125
               

               
Conread position:
               
536-797
               

               
Cow position:
               
chr14:21371948-21371684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 119
               

               
Conread position:
               
537-661
               

               
Cow position:
               
chr14:21284490-21284619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
537-709
               

               
Cow position:
               
chr14:36151161-36151337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
537-716
               

               
Cow position:
               
chr14:37152097-37151921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
537-748
               

               
Cow position:
               
chr14:15470148-15469931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
537-770
               

               
Cow position:
               
chr14:49940850-49941082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 95
               

               
Conread position:
               
537-793
               

               
Cow position:
               
chr14:21224480-21224733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
537-796
               

               
Cow position:
               
chr14:28465381-28465122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
537-815
               

               
Cow position:
               
chr14:29964854-29965134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
88, 136
               

               
Conread position:
               
537-875
               

               
Cow position:
               
chr14:16256611-16256952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
166, 74
               

               
Conread position:
               
537-875
               

               
Cow position:
               
chr14:18345887-18345548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
537-875
               

               
Cow position:
               
chr14:28304949-28304603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
537-875
               

               
Cow position:
               
chr14:38144273-38143926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 136
               

               
Conread position:
               
537-877
               

               
Cow position:
               
chr14:20932460-20932803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
537-877
               

               
Cow position:
               
chr14:21357394-21357739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 133
               

               
Conread position:
               
537-877
               

               
Cow position:
               
chr14:36166777-36167126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 135
               

               
Conread position:
               
537-887
               

               
Cow position:
               
chr14:27919898-27919540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
101, 131
               

               
Conread position:
               
537-887
               

               
Cow position:
               
chr14:28987527-28987889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
539-864
               

               
Cow position:
               
chr14:12512051-12511726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
540-820
               

               
Cow position:
               
chr14:36443177-36442895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
540-875
               

               
Cow position:
               
chr14:22988875-22989218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
540-875
               

               
Cow position:
               
chr14:38168545-38168867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
282, 13
               

               
Conread position:
               
540-876
               

               
Cow position:
               
chr14:25986352-25986704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
540-886
               

               
Cow position:
               
chr14:42330186-42330549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
72, 137
               

               
Conread position:
               
541-693
               

               
Cow position:
               
chr14:19355133-19355283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
541-714
               

               
Cow position:
               
chr14:10721861-10721690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 125
               

               
Conread position:
               
541-716
               

               
Cow position:
               
chr14:27653002-27653183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 132
               

               
Conread position:
               
541-804
               

               
Cow position:
               
chr14:49487805-49488065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
541-812
               

               
Cow position:
               
chr14:10851868-10852146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
541-827
               

               
Cow position:
               
chr14:22941899-22941593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
541-827
               

               
Cow position:
               
chr14:23424106-23424386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
541-827
               

               
Cow position:
               
chr14:23442867-23443147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
541-827
               

               
Cow position:
               
chr14:37422932-37422659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
541-873
               

               
Cow position:
               
chr14:20640788-20640443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
541-874
               

               
Cow position:
               
chr14:4877386-4877046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
541-874
               

               
Cow position:
               
chr14:20826332-20826660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr14:38355049-38355371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
268, 57
               

               
Conread position:
               
541-878
               

               
Cow position:
               
chr14:33774183-33773865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
202, 45
               

               
Conread position:
               
541-887
               

               
Cow position:
               
chr14:9019882-9020227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
223, 65
               

               
Conread position:
               
541-887
               

               
Cow position:
               
chr14:21691416-21691076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
224, 67
               

               
Conread position:
               
542-852
               

               
Cow position:
               
chr14:23419635-23419949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
72, 138
               

               
Conread position:
               
543-759
               

               
Cow position:
               
chr14:41156877-41156662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
543-854
               

               
Cow position:
               
chr14:35503206-35503528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 124
               

               
Conread position:
               
543-869
               

               
Cow position:
               
chr14:2975243-2974915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
549-819
               

               
Cow position:
               
chr14:10693408-10693138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 123
               

               
Conread position:
               
549-827
               

               
Cow position:
               
chr14:14949364-14949084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
60, 5
               

               
Conread position:
               
549-851
               

               
Cow position:
               
chr14:41302994-41302679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 238
               

               
Conread position:
               
549-870
               

               
Cow position:
               
chr14:5630017-5630342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 118
               

               
Conread position:
               
550-719
               

               
Cow position:
               
chr14:4481524-4481693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 111
               

               
Conread position:
               
550-722
               

               
Cow position:
               
chr14:11079305-11079477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 117
               

               
Conread position:
               
550-734
               

               
Cow position:
               
chr14:50519327-50519142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
550-747
               

               
Cow position:
               
chr14:7127710-7127908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 117
               

               
Conread position:
               
550-767
               

               
Cow position:
               
chr14:23078942-23078721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
550-803
               

               
Cow position:
               
chr14:11643396-11643153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
88, 121
               

               
Conread position:
               
550-805
               

               
Cow position:
               
chr14:23104146-23103891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
115, 84
               

               
Conread position:
               
550-814
               

               
Cow position:
               
chr14:45312646-45312906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
550-815
               

               
Cow position:
               
chr14:12884114-12884385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
550-819
               

               
Cow position:
               
chr14:30756691-30756961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
550-826
               

               
Cow position:
               
chr14:1803269-1802988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
550-826
               

               
Cow position:
               
chr14:5235029-5234755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 45
               

               
Conread position:
               
550-826
               

               
Cow position:
               
chr14:12081276-12081010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
259, 67
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr14:5222435-5222160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr14:26655287-26655003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 123
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr14:40754394-40754115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr14:42419429-42419145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
550-852
               

               
Cow position:
               
chr14:15504307-15503997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
550-865
               

               
Cow position:
               
chr14:14327275-14326931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 45
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr14:18941438-18941117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr14:48426922-48427259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
550-886
               

               
Cow position:
               
chr14:10609529-10609888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr14:7479856-7480216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr14:8946233-8945884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr14:16237660-16237306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
551-728
               

               
Cow position:
               
chr14:23237816-23237639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 88
               

               
Conread position:
               
551-827
               

               
Cow position:
               
chr14:14187196-14187461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
257, 21
               

               
Conread position:
               
551-827
               

               
Cow position:
               
chr14:45052289-45052569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
551-832
               

               
Cow position:
               
chr14:12073105-12072819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
68, 215
               

               
Conread position:
               
551-875
               

               
Cow position:
               
chr14:36289940-36289614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
139, 73
               

               
Conread position:
               
551-887
               

               
Cow position:
               
chr14:39434403-39434063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
114, 89
               

               
Conread position:
               
552-691
               

               
Cow position:
               
chr14:2853002-2853144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 118
               

               
Conread position:
               
552-693
               

               
Cow position:
               
chr14:10693740-10693597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
81, 135
               

               
Conread position:
               
552-703
               

               
Cow position:
               
chr14:40806746-40806605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
552-707
               

               
Cow position:
               
chr14:8949503-8949660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 116
               

               
Conread position:
               
552-727
               

               
Cow position:
               
chr14:20915129-20914947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 125
               

               
Conread position:
               
552-730
               

               
Cow position:
               
chr14:20736466-20736644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
552-734
               

               
Cow position:
               
chr14:35651928-35651748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
113, 80
               

               
Conread position:
               
552-736
               

               
Cow position:
               
chr14:8707408-8707588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
552-736
               

               
Cow position:
               
chr14:24785511-24785697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 117
               

               
Conread position:
               
552-737
               

               
Cow position:
               
chr14:7316645-7316834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
552-741
               

               
Cow position:
               
chr14:21557173-21556982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
552-747
               

               
Cow position:
               
chr14:9307918-9308115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
552-755
               

               
Cow position:
               
chr14:11729255-11729052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
552-757
               

               
Cow position:
               
chr14:11576921-11577128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
552-767
               

               
Cow position:
               
chr14:20466788-20467000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
60, 119
               

               
Conread position:
               
552-773
               

               
Cow position:
               
chr14:25903384-25903607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
54, 120
               

               
Conread position:
               
552-776
               

               
Cow position:
               
chr14:606798-606587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 56
               

               
Conread position:
               
552-787
               

               
Cow position:
               
chr14:27733460-27733696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
552-800
               

               
Cow position:
               
chr14:13928434-13928671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
187, 64
               

               
Conread position:
               
552-807
               

               
Cow position:
               
chr14:1715580-1715834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 212
               

               
Conread position:
               
552-807
               

               
Cow position:
               
chr14:25227999-25228245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
552-812
               

               
Cow position:
               
chr14:25225584-25225843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
552-816
               

               
Cow position:
               
chr14:12142064-12141776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
552-823
               

               
Cow position:
               
chr14:1868936-1868673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
165, 27
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr14:1708807-1708528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 216
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr14:11056881-11056611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr14:50362644-50362923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
552-838
               

               
Cow position:
               
chr14:24945642-24945351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
552-850
               

               
Cow position:
               
chr14:16524321-16524623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
552-854
               

               
Cow position:
               
chr14:19827620-19827321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
552-866
               

               
Cow position:
               
chr14:33714822-33714506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr14:18309448-18309118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 74
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr14:36254837-36254526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr14:38747531-38747847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
552-873
               

               
Cow position:
               
chr14:24416746-24417068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
143, 46
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr14:5835782-5836087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
256, 28
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr14:8541355-8541024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr14:10078106-10078453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr14:16550142-16549818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr14:20667153-20666838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
82, 115
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr14:28115339-28115000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr14:39770369-39770047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr14:39918884-39918577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr14:41210716-41211039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
153, 54
               

               
Conread position:
               
552-877
               

               
Cow position:
               
chr14:39037091-39037424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
212, 57
               

               
Conread position:
               
552-877
               

               
Cow position:
               
chr14:45677083-45677411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr14:14182203-14182541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr14:16352210-16352521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
293, 81
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr14:25001884-25002231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
69, 220
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr14:47673027-47672687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
6, 76
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr14:19594283-19593936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr14:38378856-38379219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
553-741
               

               
Cow position:
               
chr14:16207636-16207454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
553-741
               

               
Cow position:
               
chr14:36775516-36775693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
553-772
               

               
Cow position:
               
chr14:38286132-38285896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 204
               

               
Conread position:
               
553-820
               

               
Cow position:
               
chr14:1796050-1796312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr14:25386014-25385702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
256, 52
               

               
Conread position:
               
553-886
               

               
Cow position:
               
chr14:49824760-49824428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
554-688
               

               
Cow position:
               
chr14:21968654-21968518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
554-706
               

               
Cow position:
               
chr14:25912508-25912660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
554-707
               

               
Cow position:
               
chr14:15228398-15228550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
554-710
               

               
Cow position:
               
chr14:33618162-33618316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
554-713
               

               
Cow position:
               
chr14:19772420-19772259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 105
               

               
Conread position:
               
554-721
               

               
Cow position:
               
chr14:18112737-18112569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 114
               

               
Conread position:
               
554-728
               

               
Cow position:
               
chr14:40347788-40347615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
554-733
               

               
Cow position:
               
chr14:49563917-49563744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
554-747
               

               
Cow position:
               
chr14:10706732-10706925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
554-752
               

               
Cow position:
               
chr14:20245314-20245113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
554-783
               

               
Cow position:
               
chr14:34775895-34775663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
554-860
               

               
Cow position:
               
chr14:48496293-48495988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
52, 113
               

               
Conread position:
               
554-873
               

               
Cow position:
               
chr14:15492445-15492780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr14:3194727-3195034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr14:21933491-21933155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr14:26442492-26442156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr14:33247566-33247247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr14:7648147-7647839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr14:8786683-8786352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 65
               

               
Conread position:
               
555-705
               

               
Cow position:
               
chr14:49501153-49500998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
555-709
               

               
Cow position:
               
chr14:20035573-20035734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 119
               

               
Conread position:
               
555-717
               

               
Cow position:
               
chr14:11280258-11280093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
555-807
               

               
Cow position:
               
chr14:37901855-37902107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
555-837
               

               
Cow position:
               
chr14:46997907-46998170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
555-870
               

               
Cow position:
               
chr14:26433394-26433063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
55, 122
               

               
Conread position:
               
555-873
               

               
Cow position:
               
chr14:24607821-24608150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 157
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr14:12520449-12520122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 120
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr14:42155112-42154778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
555-876
               

               
Cow position:
               
chr14:16760254-16760583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
555-887
               

               
Cow position:
               
chr14:23712550-23712884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
161, 57
               

               
Conread position:
               
556-767
               

               
Cow position:
               
chr14:21535447-21535236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 114
               

               
Conread position:
               
556-807
               

               
Cow position:
               
chr14:25381296-25381528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
556-865
               

               
Cow position:
               
chr14:33341607-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 138
               

               
Conread position:
               
556-875
               

               
Cow position:
               
chr14:27848035-27848384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
556-887
               

               
Cow position:
               
chr14:7959654-7959969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
557-852
               

               
Cow position:
               
chr14:37866418-37866116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
557-875
               

               
Cow position:
               
chr14:40165286-40165608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
557-877
               

               
Cow position:
               
chr14:24387308-24387636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
557-878
               

               
Cow position:
               
chr14:26941364-26941037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 174
               

               
Conread position:
               
557-887
               

               
Cow position:
               
chr14:47027496-47027174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
196, 50
               

               
Conread position:
               
558-837
               

               
Cow position:
               
chr14:12127539-12127272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
250, 59
               

               
Conread position:
               
558-865
               

               
Cow position:
               
chr14:46685156-46685474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 161
               

               
Conread position:
               
559-736
               

               
Cow position:
               
chr14:12763848-12763669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
559-884
               

               
Cow position:
               
chr14:26628667-26628328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 212
               

               
Conread position:
               
560-875
               

               
Cow position:
               
chr14:33751396-33751708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
560-878
               

               
Cow position:
               
chr14:18904728-18904422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
191, 47
               

               
Conread position:
               
562-869
               

               
Cow position:
               
chr14:27076828-27077165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
563-886
               

               
Cow position:
               
chr14:8101660-8101987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
564-730
               

               
Cow position:
               
chr14:3173862-3173704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
564-827
               

               
Cow position:
               
chr14:41472112-41471843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
564-840
               

               
Cow position:
               
chr14:7695127-7695412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
565-875
               

               
Cow position:
               
chr14:1646319-1646006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
566-703
               

               
Cow position:
               
chr14:21530210-21530067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
566-875
               

               
Cow position:
               
chr14:34083283-34082968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
569-774
               

               
Cow position:
               
chr14:2038924-2038730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
195, 62
               

               
Conread position:
               
570-777
               

               
Cow position:
               
chr14:40191464-40191665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
573-887
               

               
Cow position:
               
chr14:41127779-41128093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
154, 60
               

               
Conread position:
               
574-748
               

               
Cow position:
               
chr14:1431950-1431781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
574-779
               

               
Cow position:
               
chr14:12924180-12924384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
138, 11
               

               
Conread position:
               
575-796
               

               
Cow position:
               
chr14:45291496-45291281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
576-870
               

               
Cow position:
               
chr14:19188926-19189217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
232, 45
               

               
Conread position:
               
579-777
               

               
Cow position:
               
chr14:19487183-19487373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
580-871
               

               
Cow position:
               
chr14:4203217-4202911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
586-807
               

               
Cow position:
               
chr14:43192740-43192945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
586-870
               

               
Cow position:
               
chr14:1859717-1859433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
587-875
               

               
Cow position:
               
chr14:19618865-19618566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
600-875
               

               
Cow position:
               
chr14:13426756-13427016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
602-776
               

               
Cow position:
               
chr14:25824601-25824774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
602-875
               

               
Cow position:
               
chr14:19372244-19372527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
603-874
               

               
Cow position:
               
chr14:1978165-1977895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
606-827
               

               
Cow position:
               
chr14:19951475-19951698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
606-827
               

               
Cow position:
               
chr14:29698446-29698229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
609-774
               

               
Cow position:
               
chr14:45577180-45577015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
609-849
               

               
Cow position:
               
chr14:26097781-26097536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
609-851
               

               
Cow position:
               
chr14:42436937-42437188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
609-862
               

               
Cow position:
               
chr14:14316801-14317054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
609-870
               

               
Cow position:
               
chr14:10631204-10630944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
210, 58
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr14:8749991-8750261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr14:19129418-19129697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr14:33830212-33830483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr14:37131574-37131841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr14:39926120-39926381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
609-887
               

               
Cow position:
               
chr14:16032924-16033206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
611-846
               

               
Cow position:
               
chr14:15039699-15039463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
611-875
               

               
Cow position:
               
chr14:27312327-27312612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
612-827
               

               
Cow position:
               
chr14:18763515-18763315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
196, 46
               

               
Conread position:
               
612-839
               

               
Cow position:
               
chr14:34331411-34331186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
612-874
               

               
Cow position:
               
chr14:40432844-40433105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
612-878
               

               
Cow position:
               
chr14:44257839-44258113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
613-874
               

               
Cow position:
               
chr14:9308149-9308409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
193, 55
               

               
Conread position:
               
614-827
               

               
Cow position:
               
chr14:12035328-12035536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
614-859
               

               
Cow position:
               
chr14:20600302-20600556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
614-866
               

               
Cow position:
               
chr14:46654624-46654368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr14:15055074-15054803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr14:24981378-24981643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
614-886
               

               
Cow position:
               
chr14:25779018-25779289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
614-887
               

               
Cow position:
               
chr14:4990919-4991198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
615-736
               

               
Cow position:
               
chr14:24580559-24580679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
617-861
               

               
Cow position:
               
chr14:34199923-34199677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
617-876
               

               
Cow position:
               
chr14:42784884-42785131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
617-886
               

               
Cow position:
               
chr14:45605020-45605289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
617-887
               

               
Cow position:
               
chr14:1868463-1868186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
618-823
               

               
Cow position:
               
chr14:16834243-16834450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
618-887
               

               
Cow position:
               
chr14:19863513-19863232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
619-874
               

               
Cow position:
               
chr14:34983789-34984048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
621-827
               

               
Cow position:
               
chr14:27275087-27275290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
621-875
               

               
Cow position:
               
chr14:11615295-11615036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
624-870
               

               
Cow position:
               
chr14:25404005-25403760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
204, 34
               

               
Conread position:
               
626-770
               

               
Cow position:
               
chr14:33643892-33644030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
626-875
               

               
Cow position:
               
chr14:39778684-39778936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
185, 38
               

               
Conread position:
               
627-875
               

               
Cow position:
               
chr14:33309573-33309325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
633-809
               

               
Cow position:
               
chr14:803625-803796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
633-875
               

               
Cow position:
               
chr14:17841352-17841103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
178, 25
               

               
Conread position:
               
633-875
               

               
Cow position:
               
chr14:40033934-40034159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
193, 34
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr14:20385044-20384797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
176, 32
               

               
Conread position:
               
635-876
               

               
Cow position:
               
chr14:35018812-35018568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 32
               

               
Conread position:
               
635-878
               

               
Cow position:
               
chr14:48412941-48412691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
174, 32
               

               
Conread position:
               
637-827
               

               
Cow position:
               
chr14:41180771-41180580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
639-886
               

               
Cow position:
               
chr14:12856545-12856795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
648-870
               

               
Cow position:
               
chr14:33338522-33338299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
160, 13
               

               
Conread position:
               
669-870
               

               
Cow position:
               
chr14:33643805-33643601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
669-873
               

               
Cow position:
               
chr14:41325475-41325256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 204
               

               
Conread position:
               
669-887
               

               
Cow position:
               
chr14:3162699-3162906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
670-863
               

               
Cow position:
               
chr14:10697529-10697341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
156, 25
               

               
Conread position:
               
670-870
               

               
Cow position:
               
chr14:22966728-22966934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 94
               

               
Conread position:
               
670-873
               

               
Cow position:
               
chr14:37884437-37884229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
140, 68
               

               
Conread position:
               
672-874
               

               
Cow position:
               
chr14:25231675-25231460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
106, 93
               

               
Conread position:
               
675-873
               

               
Cow position:
               
chr14:3564262-3564459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
133, 87
               

               
Conread position:
               
686-887
               

               
Cow position:
               
chr14:15032745-15032959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
698-875
               

               
Cow position:
               
chr14:33828163-33828347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 75
               

               
Conread position:
               
699-874
               

               
Cow position:
               
chr14:445406-445597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
718-869
               

               
Cow position:
               
chr14:8964569-8964720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
723-887
               

               
Cow position:
               
chr14:19221904-19222082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               
Show alignments to all cow chromosomes.