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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8017D19.3
        

               
Conread position:
               
489-870
               

               
Cow position:
               
chr16:32301748-32302131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
496-757
               

               
Cow position:
               
chr16:12324698-12324438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
499-758
               

               
Cow position:
               
chr16:11003313-11003583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 250
               

               
Conread position:
               
500-875
               

               
Cow position:
               
chr16:45678222-45677843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
508-886
               

               
Cow position:
               
chr16:16232292-16231930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
517-875
               

               
Cow position:
               
chr16:10148493-10148133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
221, 116
               

               
Conread position:
               
521-748
               

               
Cow position:
               
chr16:12220906-12220673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
522-723
               

               
Cow position:
               
chr16:33290607-33290401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
522-772
               

               
Cow position:
               
chr16:30174303-30174558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
525-734
               

               
Cow position:
               
chr16:15714328-15714115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
525-736
               

               
Cow position:
               
chr16:11653345-11653142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
525-870
               

               
Cow position:
               
chr16:39473942-39474276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
528-723
               

               
Cow position:
               
chr16:9097239-9097040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
530-716
               

               
Cow position:
               
chr16:28233093-28233281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
530-732
               

               
Cow position:
               
chr16:12457872-12458078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
530-733
               

               
Cow position:
               
chr16:9615002-9615210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 142
               

               
Conread position:
               
530-774
               

               
Cow position:
               
chr16:1582717-1582956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
530-782
               

               
Cow position:
               
chr16:6016172-6016422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
530-826
               

               
Cow position:
               
chr16:19047220-19047521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
530-829
               

               
Cow position:
               
chr16:17134849-17135148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
530-861
               

               
Cow position:
               
chr16:8738280-8737935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
90, 142
               

               
Conread position:
               
530-866
               

               
Cow position:
               
chr16:29655528-29655194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
530-870
               

               
Cow position:
               
chr16:12274283-12273929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
530-870
               

               
Cow position:
               
chr16:49336431-49336089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr16:3304246-3303888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr16:16264906-16265243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
200, 23
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr16:16552778-16552418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
531-740
               

               
Cow position:
               
chr16:17180373-17180159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr16:6609298-6609533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
531-827
               

               
Cow position:
               
chr16:10032851-10032553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
531-840
               

               
Cow position:
               
chr16:8242717-8243017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
532-733
               

               
Cow position:
               
chr16:8090318-8090525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 135
               

               
Conread position:
               
532-733
               

               
Cow position:
               
chr16:56912476-56912682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
532-759
               

               
Cow position:
               
chr16:24202650-24202884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
532-773
               

               
Cow position:
               
chr16:50442763-50442513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
82, 135
               

               
Conread position:
               
532-809
               

               
Cow position:
               
chr16:42432906-42433182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
139, 83
               

               
Conread position:
               
532-817
               

               
Cow position:
               
chr16:9553260-9552984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
532-874
               

               
Cow position:
               
chr16:8448449-8448787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
532-874
               

               
Cow position:
               
chr16:48385206-48385543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
276, 36
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr16:23822818-23823163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
532-882
               

               
Cow position:
               
chr16:12467753-12468101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
532-887
               

               
Cow position:
               
chr16:28395880-28396258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
260, 42
               

               
Conread position:
               
533-716
               

               
Cow position:
               
chr16:27326913-27327102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
533-726
               

               
Cow position:
               
chr16:25419041-25419240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 133
               

               
Conread position:
               
533-773
               

               
Cow position:
               
chr16:18243947-18243709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
81, 113
               

               
Conread position:
               
533-785
               

               
Cow position:
               
chr16:9729994-9730247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
533-814
               

               
Cow position:
               
chr16:8530689-8530956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
533-823
               

               
Cow position:
               
chr16:44429087-44428797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr16:38663497-38663794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
533-864
               

               
Cow position:
               
chr16:36120786-36121113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 91
               

               
Conread position:
               
533-874
               

               
Cow position:
               
chr16:7542495-7542140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
179, 21
               

               
Conread position:
               
533-875
               

               
Cow position:
               
chr16:31559114-31558748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
79, 140
               

               
Conread position:
               
533-886
               

               
Cow position:
               
chr16:7665850-7665479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 140
               

               
Conread position:
               
534-716
               

               
Cow position:
               
chr16:18429797-18429611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 131
               

               
Conread position:
               
534-734
               

               
Cow position:
               
chr16:10033074-10032873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 138
               

               
Conread position:
               
534-755
               

               
Cow position:
               
chr16:5382395-5382163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
76, 141
               

               
Conread position:
               
534-757
               

               
Cow position:
               
chr16:50286721-50286496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
534-767
               

               
Cow position:
               
chr16:9560276-9560522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
534-799
               

               
Cow position:
               
chr16:8953465-8953750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 145
               

               
Conread position:
               
534-799
               

               
Cow position:
               
chr16:9497051-9497323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
534-826
               

               
Cow position:
               
chr16:40333125-40333412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
534-826
               

               
Cow position:
               
chr16:55784537-55784843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 203
               

               
Conread position:
               
534-827
               

               
Cow position:
               
chr16:20476741-20476451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
534-844
               

               
Cow position:
               
chr16:38244409-38244723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 141
               

               
Conread position:
               
534-875
               

               
Cow position:
               
chr16:11957371-11957728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
534-875
               

               
Cow position:
               
chr16:29712625-29712276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
100, 126
               

               
Conread position:
               
534-877
               

               
Cow position:
               
chr16:22808367-22808698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
195, 7
               

               
Conread position:
               
534-886
               

               
Cow position:
               
chr16:55683507-55683141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
535-638
               

               
Cow position:
               
chr16:39010680-39010783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-686
               

               
Cow position:
               
chr16:39646818-39646667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 133
               

               
Conread position:
               
535-706
               

               
Cow position:
               
chr16:5396608-5396783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
535-724
               

               
Cow position:
               
chr16:8809887-8810078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
535-724
               

               
Cow position:
               
chr16:33302392-33302200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
535-728
               

               
Cow position:
               
chr16:4102634-4102819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
535-728
               

               
Cow position:
               
chr16:10249609-10249807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
535-728
               

               
Cow position:
               
chr16:12091445-12091651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
535-728
               

               
Cow position:
               
chr16:24672652-24672851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 124
               

               
Conread position:
               
535-728
               

               
Cow position:
               
chr16:45278746-45278548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
535-734
               

               
Cow position:
               
chr16:56615295-56615497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
535-744
               

               
Cow position:
               
chr16:14376989-14376778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 140
               

               
Conread position:
               
535-746
               

               
Cow position:
               
chr16:9836572-9836779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
535-747
               

               
Cow position:
               
chr16:258075-258290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
75, 138
               

               
Conread position:
               
535-748
               

               
Cow position:
               
chr16:13995988-13996203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
535-748
               

               
Cow position:
               
chr16:31484459-31484670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
535-774
               

               
Cow position:
               
chr16:56595180-56595422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
535-776
               

               
Cow position:
               
chr16:7136138-7136382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
535-781
               

               
Cow position:
               
chr16:14841572-14841318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
535-783
               

               
Cow position:
               
chr16:34291092-34291335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 73
               

               
Conread position:
               
535-803
               

               
Cow position:
               
chr16:45294753-45294482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
535-807
               

               
Cow position:
               
chr16:16697439-16697717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 240
               

               
Conread position:
               
535-809
               

               
Cow position:
               
chr16:46548054-46548343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
535-819
               

               
Cow position:
               
chr16:8018165-8017889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
535-819
               

               
Cow position:
               
chr16:9830656-9830368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
535-823
               

               
Cow position:
               
chr16:44394495-44394179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr16:15370891-15370596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
92, 135
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr16:22984958-22984671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
99, 132
               

               
Conread position:
               
535-844
               

               
Cow position:
               
chr16:20614704-20614373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 134
               

               
Conread position:
               
535-850
               

               
Cow position:
               
chr16:55233884-55233576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
535-864
               

               
Cow position:
               
chr16:2223186-2223536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
77, 138
               

               
Conread position:
               
535-864
               

               
Cow position:
               
chr16:7583606-7583264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 131
               

               
Conread position:
               
535-867
               

               
Cow position:
               
chr16:23955623-23955962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
535-870
               

               
Cow position:
               
chr16:24855742-24855403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
100, 130
               

               
Conread position:
               
535-873
               

               
Cow position:
               
chr16:12320431-12320080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
535-874
               

               
Cow position:
               
chr16:46433116-46433470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 139
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr16:820458-820104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr16:7011280-7010926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 226
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr16:11774842-11775194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr16:15809166-15808831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
189, 19
               

               
Conread position:
               
535-876
               

               
Cow position:
               
chr16:591596-591957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
79, 244
               

               
Conread position:
               
535-876
               

               
Cow position:
               
chr16:47820783-47820429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
535-876
               

               
Cow position:
               
chr16:50282227-50282570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
535-886
               

               
Cow position:
               
chr16:8025661-8026001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
273, 75
               

               
Conread position:
               
535-886
               

               
Cow position:
               
chr16:23472950-23472591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr16:34153362-34153729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
536-711
               

               
Cow position:
               
chr16:52325389-52325570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 136
               

               
Conread position:
               
536-822
               

               
Cow position:
               
chr16:56670702-56671002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
536-823
               

               
Cow position:
               
chr16:13696472-13696761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 227
               

               
Conread position:
               
536-826
               

               
Cow position:
               
chr16:40514286-40514566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
272, 81
               

               
Conread position:
               
536-827
               

               
Cow position:
               
chr16:30186851-30186557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
536-865
               

               
Cow position:
               
chr16:21451058-21450710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 110
               

               
Conread position:
               
536-875
               

               
Cow position:
               
chr16:42733814-42734157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 38
               

               
Conread position:
               
536-886
               

               
Cow position:
               
chr16:8958851-8959219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
536-887
               

               
Cow position:
               
chr16:19670151-19670489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
537-703
               

               
Cow position:
               
chr16:23515560-23515729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
537-722
               

               
Cow position:
               
chr16:21442404-21442593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
537-833
               

               
Cow position:
               
chr16:39682894-39683192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
537-864
               

               
Cow position:
               
chr16:56874027-56874353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
537-870
               

               
Cow position:
               
chr16:47835123-47834800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
273, 17
               

               
Conread position:
               
537-874
               

               
Cow position:
               
chr16:47243167-47242817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
537-887
               

               
Cow position:
               
chr16:56126573-56126935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
537-888
               

               
Cow position:
               
chr16:40446473-40446095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
537-888
               

               
Cow position:
               
chr16:48493368-48493023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
262, 73
               

               
Conread position:
               
538-711
               

               
Cow position:
               
chr16:2738622-2738789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
538-767
               

               
Cow position:
               
chr16:17283647-17283419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
538-875
               

               
Cow position:
               
chr16:7702718-7702391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
540-706
               

               
Cow position:
               
chr16:11775794-11775960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
94, 132
               

               
Conread position:
               
540-734
               

               
Cow position:
               
chr16:48567731-48567539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
107, 83
               

               
Conread position:
               
540-767
               

               
Cow position:
               
chr16:53408744-53408957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
540-826
               

               
Cow position:
               
chr16:50931330-50931602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
268, 91
               

               
Conread position:
               
540-849
               

               
Cow position:
               
chr16:16565312-16565006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
173, 71
               

               
Conread position:
               
540-866
               

               
Cow position:
               
chr16:4971819-4972156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
540-869
               

               
Cow position:
               
chr16:8065682-8066023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 132
               

               
Conread position:
               
540-870
               

               
Cow position:
               
chr16:51598410-51598744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
540-878
               

               
Cow position:
               
chr16:53428457-53428110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
540-887
               

               
Cow position:
               
chr16:13689866-13689507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
540-887
               

               
Cow position:
               
chr16:42092175-42092539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
540-887
               

               
Cow position:
               
chr16:53627250-53627582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
268, 68
               

               
Conread position:
               
541-672
               

               
Cow position:
               
chr16:7550213-7550083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
541-709
               

               
Cow position:
               
chr16:17746235-17746068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
541-711
               

               
Cow position:
               
chr16:49733943-49734116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 130
               

               
Conread position:
               
541-716
               

               
Cow position:
               
chr16:13791809-13791627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 134
               

               
Conread position:
               
541-728
               

               
Cow position:
               
chr16:50569462-50569276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 120
               

               
Conread position:
               
541-731
               

               
Cow position:
               
chr16:7912329-7912138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
541-734
               

               
Cow position:
               
chr16:22776217-22776416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
74, 135
               

               
Conread position:
               
541-734
               

               
Cow position:
               
chr16:38355230-38355421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
541-736
               

               
Cow position:
               
chr16:53451907-53451709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
541-767
               

               
Cow position:
               
chr16:18047950-18048182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
541-775
               

               
Cow position:
               
chr16:20824679-20824442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
541-788
               

               
Cow position:
               
chr16:9578291-9578542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
541-825
               

               
Cow position:
               
chr16:28444285-28444571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 200
               

               
Conread position:
               
541-826
               

               
Cow position:
               
chr16:4851913-4852202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
541-826
               

               
Cow position:
               
chr16:8493787-8494083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 131
               

               
Conread position:
               
541-827
               

               
Cow position:
               
chr16:45122244-45121952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
541-869
               

               
Cow position:
               
chr16:11083198-11082872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 114
               

               
Conread position:
               
541-871
               

               
Cow position:
               
chr16:9933362-9933019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 169
               

               
Conread position:
               
541-873
               

               
Cow position:
               
chr16:8322794-8323124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 26
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr16:48957001-48956651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr16:49125988-49126329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr16:52790233-52789915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
221, 71
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr16:56232014-56231683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
263, 93
               

               
Conread position:
               
541-887
               

               
Cow position:
               
chr16:25839813-25839462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 67
               

               
Conread position:
               
542-696
               

               
Cow position:
               
chr16:8083726-8083886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
542-717
               

               
Cow position:
               
chr16:30646710-30646535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 119
               

               
Conread position:
               
542-806
               

               
Cow position:
               
chr16:47303912-47304188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
542-819
               

               
Cow position:
               
chr16:12543191-12542903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
542-875
               

               
Cow position:
               
chr16:3246001-3246350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
542-886
               

               
Cow position:
               
chr16:44584242-44584592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
543-715
               

               
Cow position:
               
chr16:12111768-12111941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
543-866
               

               
Cow position:
               
chr16:7582916-7582583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
549-707
               

               
Cow position:
               
chr16:48130202-48130362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 120
               

               
Conread position:
               
549-737
               

               
Cow position:
               
chr16:44688205-44688388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 68
               

               
Conread position:
               
549-767
               

               
Cow position:
               
chr16:50678051-50677835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
550-693
               

               
Cow position:
               
chr16:51393194-51393344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr16:8288758-8288935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
550-734
               

               
Cow position:
               
chr16:27051241-27051051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
550-734
               

               
Cow position:
               
chr16:42253213-42253393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
550-741
               

               
Cow position:
               
chr16:7928189-7928386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
550-741
               

               
Cow position:
               
chr16:45193615-45193810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
550-742
               

               
Cow position:
               
chr16:40029692-40029885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
550-772
               

               
Cow position:
               
chr16:31575340-31575112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
60, 123
               

               
Conread position:
               
550-801
               

               
Cow position:
               
chr16:589534-589768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
213, 21
               

               
Conread position:
               
550-810
               

               
Cow position:
               
chr16:23718781-23719047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 224
               

               
Conread position:
               
550-815
               

               
Cow position:
               
chr16:33236090-33236349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
550-825
               

               
Cow position:
               
chr16:29038110-29037827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
550-826
               

               
Cow position:
               
chr16:42398696-42398983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr16:20872204-20871940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr16:36286494-36286768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
550-854
               

               
Cow position:
               
chr16:26372770-26373057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
550-866
               

               
Cow position:
               
chr16:7151980-7152307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr16:35195418-35195749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr16:43308372-43308709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
550-877
               

               
Cow position:
               
chr16:50906671-50906325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
75, 195
               

               
Conread position:
               
550-883
               

               
Cow position:
               
chr16:35758394-35758060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
550-883
               

               
Cow position:
               
chr16:56082169-56082512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
550-886
               

               
Cow position:
               
chr16:6344265-6344591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
193, 61
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr16:17746037-17745678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr16:48145212-48145563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 112
               

               
Conread position:
               
551-714
               

               
Cow position:
               
chr16:56580099-56579935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
551-733
               

               
Cow position:
               
chr16:8469872-8469684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
551-767
               

               
Cow position:
               
chr16:49860426-49860205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
551-768
               

               
Cow position:
               
chr16:15407364-15407585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
551-773
               

               
Cow position:
               
chr16:32142284-32142058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
551-827
               

               
Cow position:
               
chr16:44138298-44138585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
551-865
               

               
Cow position:
               
chr16:7441908-7442236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 117
               

               
Conread position:
               
551-866
               

               
Cow position:
               
chr16:46552985-46552676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
551-874
               

               
Cow position:
               
chr16:9600608-9600290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 119
               

               
Conread position:
               
551-887
               

               
Cow position:
               
chr16:1548689-1549028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 111
               

               
Conread position:
               
551-887
               

               
Cow position:
               
chr16:16235939-16236285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
551-887
               

               
Cow position:
               
chr16:47662918-47662556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
552-680
               

               
Cow position:
               
chr16:23034020-23033887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
552-692
               

               
Cow position:
               
chr16:23881022-23881163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
552-708
               

               
Cow position:
               
chr16:16178216-16178064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
552-708
               

               
Cow position:
               
chr16:31011519-31011359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
552-710
               

               
Cow position:
               
chr16:4616493-4616653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
552-710
               

               
Cow position:
               
chr16:15251869-15252022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
552-713
               

               
Cow position:
               
chr16:56285503-56285660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
552-716
               

               
Cow position:
               
chr16:51143990-51143823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
552-718
               

               
Cow position:
               
chr16:17617169-17617341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 120
               

               
Conread position:
               
552-722
               

               
Cow position:
               
chr16:3938821-3938997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
552-729
               

               
Cow position:
               
chr16:11791275-11791097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
114, 95
               

               
Conread position:
               
552-731
               

               
Cow position:
               
chr16:11660279-11660452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
552-735
               

               
Cow position:
               
chr16:15949317-15949503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
552-736
               

               
Cow position:
               
chr16:19402574-19402758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
552-736
               

               
Cow position:
               
chr16:19478577-19478761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
552-737
               

               
Cow position:
               
chr16:19496829-19497014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
552-743
               

               
Cow position:
               
chr16:16025635-16025433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 126
               

               
Conread position:
               
552-747
               

               
Cow position:
               
chr16:15945061-15945263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
75, 125
               

               
Conread position:
               
552-747
               

               
Cow position:
               
chr16:35297593-35297399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
184, 72
               

               
Conread position:
               
552-748
               

               
Cow position:
               
chr16:29636054-29636239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
552-749
               

               
Cow position:
               
chr16:7546645-7546835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
552-752
               

               
Cow position:
               
chr16:48613287-48613489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
552-764
               

               
Cow position:
               
chr16:7496440-7496233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
552-767
               

               
Cow position:
               
chr16:11390083-11390313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
552-768
               

               
Cow position:
               
chr16:12939808-12939590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 115
               

               
Conread position:
               
552-770
               

               
Cow position:
               
chr16:31149566-31149348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
552-770
               

               
Cow position:
               
chr16:32893810-32893598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
552-772
               

               
Cow position:
               
chr16:7812884-7812660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
59, 125
               

               
Conread position:
               
552-772
               

               
Cow position:
               
chr16:11359338-11359120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
75, 113
               

               
Conread position:
               
552-773
               

               
Cow position:
               
chr16:11584216-11584438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
552-773
               

               
Cow position:
               
chr16:37401430-37401218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
141, 72
               

               
Conread position:
               
552-777
               

               
Cow position:
               
chr16:15905053-15905287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
552-779
               

               
Cow position:
               
chr16:17460368-17460128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
552-796
               

               
Cow position:
               
chr16:7394748-7394989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
552-801
               

               
Cow position:
               
chr16:12687926-12688167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
552-804
               

               
Cow position:
               
chr16:8673419-8673683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
552-807
               

               
Cow position:
               
chr16:31561945-31561687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
72, 107
               

               
Conread position:
               
552-812
               

               
Cow position:
               
chr16:42977665-42977393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
552-823
               

               
Cow position:
               
chr16:45700289-45700563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
72, 215
               

               
Conread position:
               
552-825
               

               
Cow position:
               
chr16:9905287-9905006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
552-825
               

               
Cow position:
               
chr16:22773164-22772893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
552-826
               

               
Cow position:
               
chr16:19052824-19052554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr16:424618-424900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
67, 85
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr16:13990157-13989895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
257, 59
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr16:47519023-47518751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr16:54226423-54226685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
552-848
               

               
Cow position:
               
chr16:5415554-5415865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 168
               

               
Conread position:
               
552-850
               

               
Cow position:
               
chr16:30036426-30036125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
552-862
               

               
Cow position:
               
chr16:4856908-4857226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
552-865
               

               
Cow position:
               
chr16:4059551-4059221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
552-865
               

               
Cow position:
               
chr16:33595757-33596069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
254, 56
               

               
Conread position:
               
552-866
               

               
Cow position:
               
chr16:29096108-29095805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
552-866
               

               
Cow position:
               
chr16:42444351-42444021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 122
               

               
Conread position:
               
552-866
               

               
Cow position:
               
chr16:46655473-46655150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 137
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr16:48095578-48095900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr16:54579356-54579031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
552-873
               

               
Cow position:
               
chr16:32969891-32970220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
552-873
               

               
Cow position:
               
chr16:38708645-38708972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
552-873
               

               
Cow position:
               
chr16:49229583-49229913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
552-873
               

               
Cow position:
               
chr16:50417520-50417825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
256, 75
               

               
Conread position:
               
552-874
               

               
Cow position:
               
chr16:18757644-18757983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:3047151-3047485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:4275551-4275885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:7418564-7418240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:8239673-8240009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:14242559-14242228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:16402128-16402467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 170
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:23681552-23681226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:27723402-27723069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 60
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:31348571-31348911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:33198242-33198578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:39165424-39165100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 106
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr16:52274944-52275274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 111
               

               
Conread position:
               
552-876
               

               
Cow position:
               
chr16:41590962-41590630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
552-876
               

               
Cow position:
               
chr16:52170244-52169921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
552-877
               

               
Cow position:
               
chr16:19002919-19003223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
319, 61
               

               
Conread position:
               
552-878
               

               
Cow position:
               
chr16:11008519-11008198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 44
               

               
Conread position:
               
552-880
               

               
Cow position:
               
chr16:8068625-8068967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
552-884
               

               
Cow position:
               
chr16:14106835-14106494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 247
               

               
Conread position:
               
552-884
               

               
Cow position:
               
chr16:50933703-50934025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr16:23564329-23563981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 198
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr16:38905033-38905384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
75, 222
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr16:42078657-42078994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 117
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr16:52834710-52835038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 65
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr16:41530117-41530448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
552-888
               

               
Cow position:
               
chr16:14974377-14974688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
277, 20
               

               
Conread position:
               
553-709
               

               
Cow position:
               
chr16:41696196-41696039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
553-719
               

               
Cow position:
               
chr16:13290689-13290535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
553-773
               

               
Cow position:
               
chr16:7626343-7626125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
553-826
               

               
Cow position:
               
chr16:56796464-56796751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
64, 231
               

               
Conread position:
               
553-870
               

               
Cow position:
               
chr16:49125331-49125667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
553-871
               

               
Cow position:
               
chr16:54709863-54710173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
263, 58
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr16:14685201-14685533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 214
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr16:26649445-26649773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
553-887
               

               
Cow position:
               
chr16:6887258-6887600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 112
               

               
Conread position:
               
554-687
               

               
Cow position:
               
chr16:41653161-41653026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
554-703
               

               
Cow position:
               
chr16:20921341-20921184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
554-703
               

               
Cow position:
               
chr16:56627120-56626971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
554-710
               

               
Cow position:
               
chr16:34506534-34506381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
554-731
               

               
Cow position:
               
chr16:28980021-28979841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
554-734
               

               
Cow position:
               
chr16:28199217-28199035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
554-736
               

               
Cow position:
               
chr16:9513481-9513298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
554-736
               

               
Cow position:
               
chr16:17474945-17474769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
554-758
               

               
Cow position:
               
chr16:33632489-33632694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 79
               

               
Conread position:
               
554-776
               

               
Cow position:
               
chr16:7723888-7723663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
554-794
               

               
Cow position:
               
chr16:12010287-12010040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 119
               

               
Conread position:
               
554-800
               

               
Cow position:
               
chr16:51043835-51043594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
554-824
               

               
Cow position:
               
chr16:31078914-31079174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr16:45554623-45554356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr16:47852409-47852679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr16:54664610-54664887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
554-832
               

               
Cow position:
               
chr16:29528028-29527732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 282
               

               
Conread position:
               
554-862
               

               
Cow position:
               
chr16:51697264-51696949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
554-866
               

               
Cow position:
               
chr16:44210371-44210700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
554-870
               

               
Cow position:
               
chr16:18206144-18205822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
554-872
               

               
Cow position:
               
chr16:45348579-45348245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
554-873
               

               
Cow position:
               
chr16:43276219-43275880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
554-873
               

               
Cow position:
               
chr16:54288056-54287729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
58, 147
               

               
Conread position:
               
554-874
               

               
Cow position:
               
chr16:38243471-38243805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
54, 119
               

               
Conread position:
               
554-874
               

               
Cow position:
               
chr16:41752392-41752715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
554-874
               

               
Cow position:
               
chr16:51247134-51246805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 121
               

               
Conread position:
               
554-874
               

               
Cow position:
               
chr16:51501117-51500791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr16:15824252-15824588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr16:16597748-16597422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr16:17143127-17142792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr16:33704991-33704663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
554-877
               

               
Cow position:
               
chr16:238455-238120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
554-886
               

               
Cow position:
               
chr16:14754139-14754478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 116
               

               
Conread position:
               
554-886
               

               
Cow position:
               
chr16:48398068-48398408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
554-886
               

               
Cow position:
               
chr16:50688696-50688369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
272, 34
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr16:6262660-6263017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 192
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr16:10039655-10039995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr16:13712753-13713067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr16:29766509-29766180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
555-703
               

               
Cow position:
               
chr16:47774137-47773997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
555-732
               

               
Cow position:
               
chr16:4507879-4507704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
555-743
               

               
Cow position:
               
chr16:17736416-17736236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
555-744
               

               
Cow position:
               
chr16:30908761-30908951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
555-744
               

               
Cow position:
               
chr16:34204877-34205068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
555-769
               

               
Cow position:
               
chr16:9959017-9958801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
555-769
               

               
Cow position:
               
chr16:31241104-31241318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
555-772
               

               
Cow position:
               
chr16:15023446-15023664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
555-823
               

               
Cow position:
               
chr16:22850516-22850245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
555-826
               

               
Cow position:
               
chr16:42201093-42200813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
555-827
               

               
Cow position:
               
chr16:4910334-4910613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 113
               

               
Conread position:
               
555-827
               

               
Cow position:
               
chr16:8193644-8193369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
555-827
               

               
Cow position:
               
chr16:23729730-23730013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
555-831
               

               
Cow position:
               
chr16:21381384-21381651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
254, 61
               

               
Conread position:
               
555-865
               

               
Cow position:
               
chr16:13698706-13698378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
555-874
               

               
Cow position:
               
chr16:13306683-13307006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr16:14125309-14125010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
157, 79
               

               
Conread position:
               
555-877
               

               
Cow position:
               
chr16:689872-689565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
278, 33
               

               
Conread position:
               
555-882
               

               
Cow position:
               
chr16:33646203-33645864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 118
               

               
Conread position:
               
555-884
               

               
Cow position:
               
chr16:12360799-12361129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
555-884
               

               
Cow position:
               
chr16:42340365-42340043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
253, 25
               

               
Conread position:
               
555-887
               

               
Cow position:
               
chr16:8841085-8840737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
555-887
               

               
Cow position:
               
chr16:26676501-26676847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
77, 112
               

               
Conread position:
               
556-733
               

               
Cow position:
               
chr16:30211636-30211461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
78, 109
               

               
Conread position:
               
556-762
               

               
Cow position:
               
chr16:18953769-18953562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 112
               

               
Conread position:
               
556-772
               

               
Cow position:
               
chr16:51795417-51795635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
556-805
               

               
Cow position:
               
chr16:11916020-11916276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 218
               

               
Conread position:
               
556-819
               

               
Cow position:
               
chr16:30305630-30305893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
556-827
               

               
Cow position:
               
chr16:34753766-34754047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 121
               

               
Conread position:
               
556-870
               

               
Cow position:
               
chr16:54225330-54225645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
556-873
               

               
Cow position:
               
chr16:14568304-14568623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
556-875
               

               
Cow position:
               
chr16:29557437-29557771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
556-877
               

               
Cow position:
               
chr16:10505001-10504687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
254, 14
               

               
Conread position:
               
557-709
               

               
Cow position:
               
chr16:33629606-33629454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
557-711
               

               
Cow position:
               
chr16:29060570-29060406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
557-741
               

               
Cow position:
               
chr16:9079517-9079338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
557-758
               

               
Cow position:
               
chr16:9596553-9596352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 104
               

               
Conread position:
               
557-799
               

               
Cow position:
               
chr16:51610639-51610892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
557-830
               

               
Cow position:
               
chr16:11134799-11135069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
557-870
               

               
Cow position:
               
chr16:31117432-31117752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
557-875
               

               
Cow position:
               
chr16:20205650-20205312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
557-875
               

               
Cow position:
               
chr16:25387155-25386837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
558-823
               

               
Cow position:
               
chr16:26030691-26030965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 219
               

               
Conread position:
               
558-874
               

               
Cow position:
               
chr16:19644071-19643746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 109
               

               
Conread position:
               
559-709
               

               
Cow position:
               
chr16:11765071-11765221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
559-825
               

               
Cow position:
               
chr16:16571084-16570830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
250, 65
               

               
Conread position:
               
559-825
               

               
Cow position:
               
chr16:25170577-25170309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
559-826
               

               
Cow position:
               
chr16:48917659-48917381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
560-748
               

               
Cow position:
               
chr16:31046507-31046688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
560-875
               

               
Cow position:
               
chr16:4192248-4192563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
563-723
               

               
Cow position:
               
chr16:45826541-45826701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
563-737
               

               
Cow position:
               
chr16:39385669-39385494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
563-758
               

               
Cow position:
               
chr16:13252139-13252324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
563-827
               

               
Cow position:
               
chr16:2417406-2417676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
563-875
               

               
Cow position:
               
chr16:8315032-8315328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
246, 47
               

               
Conread position:
               
563-875
               

               
Cow position:
               
chr16:45139844-45139528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
563-882
               

               
Cow position:
               
chr16:42241943-42242268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
563-887
               

               
Cow position:
               
chr16:3614917-3614591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
564-827
               

               
Cow position:
               
chr16:54734428-54734159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 206
               

               
Conread position:
               
565-818
               

               
Cow position:
               
chr16:1220000-1220260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
565-870
               

               
Cow position:
               
chr16:50289329-50289011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
566-827
               

               
Cow position:
               
chr16:13578678-13578948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
566-875
               

               
Cow position:
               
chr16:31269320-31268997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
566-886
               

               
Cow position:
               
chr16:27701086-27701393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
568-871
               

               
Cow position:
               
chr16:33267896-33267576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 183
               

               
Conread position:
               
568-875
               

               
Cow position:
               
chr16:47964646-47964959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
569-827
               

               
Cow position:
               
chr16:37452440-37452702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
569-875
               

               
Cow position:
               
chr16:7505253-7504944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
569-887
               

               
Cow position:
               
chr16:7456282-7456617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
571-854
               

               
Cow position:
               
chr16:33405317-33405608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
571-875
               

               
Cow position:
               
chr16:8366652-8366964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
572-823
               

               
Cow position:
               
chr16:7619003-7619260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 141
               

               
Conread position:
               
572-869
               

               
Cow position:
               
chr16:41578397-41578088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
573-782
               

               
Cow position:
               
chr16:27728425-27728218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
573-873
               

               
Cow position:
               
chr16:10592613-10592293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
49, 142
               

               
Conread position:
               
573-884
               

               
Cow position:
               
chr16:43661604-43661292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
191, 35
               

               
Conread position:
               
573-886
               

               
Cow position:
               
chr16:51112711-51113033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
573-887
               

               
Cow position:
               
chr16:25484492-25484207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
295, 50
               

               
Conread position:
               
574-854
               

               
Cow position:
               
chr16:27659592-27659866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
574-857
               

               
Cow position:
               
chr16:9161245-9160966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
189, 52
               

               
Conread position:
               
575-773
               

               
Cow position:
               
chr16:21370017-21370220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
576-887
               

               
Cow position:
               
chr16:11615076-11615389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
577-875
               

               
Cow position:
               
chr16:33226372-33226682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
580-803
               

               
Cow position:
               
chr16:55944983-55945203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
580-869
               

               
Cow position:
               
chr16:50453920-50453624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
580-874
               

               
Cow position:
               
chr16:56565760-56565453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
580-878
               

               
Cow position:
               
chr16:5896583-5896272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
581-876
               

               
Cow position:
               
chr16:48006332-48006632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
585-869
               

               
Cow position:
               
chr16:54679821-54679531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
586-866
               

               
Cow position:
               
chr16:16548779-16548475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
587-819
               

               
Cow position:
               
chr16:8768940-8768726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
587-875
               

               
Cow position:
               
chr16:31122100-31122389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
167, 80
               

               
Conread position:
               
588-827
               

               
Cow position:
               
chr16:48086718-48086954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
588-887
               

               
Cow position:
               
chr16:42753000-42752699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
588-887
               

               
Cow position:
               
chr16:45610143-45609834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
32, 147
               

               
Conread position:
               
590-827
               

               
Cow position:
               
chr16:13969207-13969458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 195
               

               
Conread position:
               
590-869
               

               
Cow position:
               
chr16:22380202-22380493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
590-886
               

               
Cow position:
               
chr16:20633727-20634034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
595-773
               

               
Cow position:
               
chr16:19815104-19815280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
598-827
               

               
Cow position:
               
chr16:21317455-21317682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 24
               

               
Conread position:
               
598-875
               

               
Cow position:
               
chr16:45457112-45456813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 185
               

               
Conread position:
               
599-873
               

               
Cow position:
               
chr16:11806813-11806534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
601-827
               

               
Cow position:
               
chr16:47855077-47854857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
602-827
               

               
Cow position:
               
chr16:33869632-33869847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
207, 13
               

               
Conread position:
               
602-875
               

               
Cow position:
               
chr16:13195204-13195485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
606-875
               

               
Cow position:
               
chr16:18353825-18354096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
608-826
               

               
Cow position:
               
chr16:34220316-34220098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
608-875
               

               
Cow position:
               
chr16:48369822-48370091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
609-773
               

               
Cow position:
               
chr16:17291890-17292056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
609-802
               

               
Cow position:
               
chr16:45785868-45785675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-807
               

               
Cow position:
               
chr16:46430022-46430217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-809
               

               
Cow position:
               
chr16:8273707-8273904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
609-811
               

               
Cow position:
               
chr16:496249-496444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
609-818
               

               
Cow position:
               
chr16:12501030-12501239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
609-820
               

               
Cow position:
               
chr16:9500649-9500437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
153, 24
               

               
Conread position:
               
609-837
               

               
Cow position:
               
chr16:3114670-3114441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-854
               

               
Cow position:
               
chr16:22327639-22327388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
609-869
               

               
Cow position:
               
chr16:5364032-5363758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
609-870
               

               
Cow position:
               
chr16:7499181-7498922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
609-873
               

               
Cow position:
               
chr16:7550097-7549826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr16:15960159-15960435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr16:20025571-20025303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr16:49169250-49169529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
609-886
               

               
Cow position:
               
chr16:43105386-43105669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
609-887
               

               
Cow position:
               
chr16:19408401-19408673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
150, 17
               

               
Conread position:
               
611-875
               

               
Cow position:
               
chr16:41689822-41689552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
612-827
               

               
Cow position:
               
chr16:42633616-42633837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
612-866
               

               
Cow position:
               
chr16:53830468-53830720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
612-887
               

               
Cow position:
               
chr16:43800789-43801075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
614-736
               

               
Cow position:
               
chr16:20265437-20265559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
614-820
               

               
Cow position:
               
chr16:17135850-17135650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
614-827
               

               
Cow position:
               
chr16:33054355-33054570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
614-866
               

               
Cow position:
               
chr16:17282784-17282530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
614-868
               

               
Cow position:
               
chr16:35188375-35188117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
614-870
               

               
Cow position:
               
chr16:6378999-6379246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
614-870
               

               
Cow position:
               
chr16:25380369-25380635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr16:5257122-5256856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr16:12060540-12060273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr16:17627055-17626786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
614-884
               

               
Cow position:
               
chr16:22804472-22804744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
614-887
               

               
Cow position:
               
chr16:13611329-13611607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
615-870
               

               
Cow position:
               
chr16:48494429-48494692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
616-875
               

               
Cow position:
               
chr16:30715629-30715352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
617-792
               

               
Cow position:
               
chr16:15953696-15953872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
617-827
               

               
Cow position:
               
chr16:44683535-44683748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
617-870
               

               
Cow position:
               
chr16:28833964-28833700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
617-873
               

               
Cow position:
               
chr16:30036869-30037133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
617-873
               

               
Cow position:
               
chr16:35623127-35623383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr16:3634239-3633969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr16:11105674-11105409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr16:52133395-52133659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
617-886
               

               
Cow position:
               
chr16:11102700-11102980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
617-886
               

               
Cow position:
               
chr16:40562354-40562075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
618-827
               

               
Cow position:
               
chr16:8933306-8933510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
618-827
               

               
Cow position:
               
chr16:43674996-43674788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
618-848
               

               
Cow position:
               
chr16:20069954-20069721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
618-870
               

               
Cow position:
               
chr16:16096856-16096597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
619-887
               

               
Cow position:
               
chr16:39394691-39394419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
620-874
               

               
Cow position:
               
chr16:5836702-5836440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
620-886
               

               
Cow position:
               
chr16:8438534-8438787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
620-887
               

               
Cow position:
               
chr16:37669620-37669891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
180, 49
               

               
Conread position:
               
621-854
               

               
Cow position:
               
chr16:22207196-22206953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
621-869
               

               
Cow position:
               
chr16:22919586-22919346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
621-874
               

               
Cow position:
               
chr16:42345498-42345746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
207, 14
               

               
Conread position:
               
621-875
               

               
Cow position:
               
chr16:9973380-9973642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
621-886
               

               
Cow position:
               
chr16:570804-571069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
622-820
               

               
Cow position:
               
chr16:31426454-31426264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
186, 16
               

               
Conread position:
               
622-874
               

               
Cow position:
               
chr16:53086223-53086472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
622-875
               

               
Cow position:
               
chr16:48340576-48340839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
622-876
               

               
Cow position:
               
chr16:4698872-4699125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
623-826
               

               
Cow position:
               
chr16:4399852-4399651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
623-875
               

               
Cow position:
               
chr16:4626276-4626535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
623-875
               

               
Cow position:
               
chr16:17945636-17945378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
623-875
               

               
Cow position:
               
chr16:24826187-24825928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
187, 44
               

               
Conread position:
               
626-822
               

               
Cow position:
               
chr16:42241158-42240968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
626-827
               

               
Cow position:
               
chr16:17289061-17288860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
626-886
               

               
Cow position:
               
chr16:18402800-18402530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
185, 43
               

               
Conread position:
               
628-863
               

               
Cow position:
               
chr16:36203510-36203749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
629-861
               

               
Cow position:
               
chr16:25965606-25965374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
179, 22
               

               
Conread position:
               
632-827
               

               
Cow position:
               
chr16:42176755-42176557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
632-875
               

               
Cow position:
               
chr16:23738286-23738035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
174, 35
               

               
Conread position:
               
633-827
               

               
Cow position:
               
chr16:21761866-21762058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
175, 34
               

               
Conread position:
               
635-818
               

               
Cow position:
               
chr16:38091121-38091302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
174, 32
               

               
Conread position:
               
635-824
               

               
Cow position:
               
chr16:50667393-50667202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
635-825
               

               
Cow position:
               
chr16:17903543-17903734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
635-827
               

               
Cow position:
               
chr16:21040129-21039941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
635-827
               

               
Cow position:
               
chr16:41696990-41697172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 32
               

               
Conread position:
               
635-851
               

               
Cow position:
               
chr16:46452642-46452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr16:5636686-5636445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 32
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr16:52889310-52889552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
171, 9
               

               
Conread position:
               
635-877
               

               
Cow position:
               
chr16:43505709-43505944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
174, 32
               

               
Conread position:
               
636-875
               

               
Cow position:
               
chr16:56831641-56831881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
172, 16
               

               
Conread position:
               
639-875
               

               
Cow position:
               
chr16:32327757-32327508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
642-827
               

               
Cow position:
               
chr16:18141232-18141415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
166, 25
               

               
Conread position:
               
649-862
               

               
Cow position:
               
chr16:45753366-45753581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
649-875
               

               
Cow position:
               
chr16:39513988-39514219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
649-887
               

               
Cow position:
               
chr16:22860675-22860916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
663-874
               

               
Cow position:
               
chr16:53048630-53048412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
663-886
               

               
Cow position:
               
chr16:39646622-39646394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
111, 95
               

               
Conread position:
               
670-827
               

               
Cow position:
               
chr16:37719229-37719071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
670-870
               

               
Cow position:
               
chr16:8279722-8279925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
670-875
               

               
Cow position:
               
chr16:50521547-50521334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
139, 99
               

               
Conread position:
               
670-875
               

               
Cow position:
               
chr16:53891716-53891925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
141, 69
               

               
Conread position:
               
672-875
               

               
Cow position:
               
chr16:13232881-13233092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
136, 92
               

               
Conread position:
               
673-873
               

               
Cow position:
               
chr16:54084103-54083893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
135, 91
               

               
Conread position:
               
673-875
               

               
Cow position:
               
chr16:24672291-24672501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
136, 29
               

               
Conread position:
               
673-878
               

               
Cow position:
               
chr16:42217623-42217833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
673-887
               

               
Cow position:
               
chr16:4981310-4981538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
676-886
               

               
Cow position:
               
chr16:10650824-10651046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
680-815
               

               
Cow position:
               
chr16:15752761-15752629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
682-875
               

               
Cow position:
               
chr16:21905220-21905022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
682-875
               

               
Cow position:
               
chr16:39238004-39237803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
685-874
               

               
Cow position:
               
chr16:45535230-45535037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
689-874
               

               
Cow position:
               
chr16:4145114-4144921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
703-878
               

               
Cow position:
               
chr16:4372456-4372641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
707-874
               

               
Cow position:
               
chr16:13973253-13973424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
709-886
               

               
Cow position:
               
chr16:13791548-13791361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
715-875
               

               
Cow position:
               
chr16:15189211-15189041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
723-875
               

               
Cow position:
               
chr16:39417103-39417261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
727-887
               

               
Cow position:
               
chr16:47620392-47620223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 31
               
Show alignments to all cow chromosomes.