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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8017D19.3
        

               
Conread position:
               
463-875
               

               
Cow position:
               
chr19:41497372-41497785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
508-814
               

               
Cow position:
               
chr19:34420632-34420328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
513-709
               

               
Cow position:
               
chr19:33610107-33609908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
520-711
               

               
Cow position:
               
chr19:7558759-7558562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
520-875
               

               
Cow position:
               
chr19:34955502-34955848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
525-718
               

               
Cow position:
               
chr19:41775747-41775926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
525-875
               

               
Cow position:
               
chr19:3811815-3812166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
525-875
               

               
Cow position:
               
chr19:25726682-25727033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
527-875
               

               
Cow position:
               
chr19:15887114-15887477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
527-886
               

               
Cow position:
               
chr19:4587524-4587887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
528-875
               

               
Cow position:
               
chr19:12747572-12747931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
529-823
               

               
Cow position:
               
chr19:49221420-49221710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
88, 143
               

               
Conread position:
               
530-703
               

               
Cow position:
               
chr19:30384894-30385068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
530-707
               

               
Cow position:
               
chr19:39378098-39378270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
530-709
               

               
Cow position:
               
chr19:12943818-12943652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
530-710
               

               
Cow position:
               
chr19:53189651-53189837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
530-716
               

               
Cow position:
               
chr19:14588606-14588415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
530-727
               

               
Cow position:
               
chr19:12093562-12093360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
530-733
               

               
Cow position:
               
chr19:5521956-5522160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
530-736
               

               
Cow position:
               
chr19:52356451-52356244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
530-784
               

               
Cow position:
               
chr19:23088180-23087930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
530-785
               

               
Cow position:
               
chr19:21176544-21176797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
530-814
               

               
Cow position:
               
chr19:13933646-13933357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
93, 112
               

               
Conread position:
               
530-826
               

               
Cow position:
               
chr19:13267005-13267289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
278, 116
               

               
Conread position:
               
530-827
               

               
Cow position:
               
chr19:2220869-2221176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
530-827
               

               
Cow position:
               
chr19:25041044-25041335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
530-870
               

               
Cow position:
               
chr19:15438302-15437953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr19:6532072-6531736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
531-700
               

               
Cow position:
               
chr19:25572971-25572799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
531-709
               

               
Cow position:
               
chr19:22456078-22456245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
531-730
               

               
Cow position:
               
chr19:52694503-52694310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
531-827
               

               
Cow position:
               
chr19:1650706-1650411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 130
               

               
Conread position:
               
531-875
               

               
Cow position:
               
chr19:24062475-24062137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 140
               

               
Conread position:
               
531-875
               

               
Cow position:
               
chr19:39246109-39245744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
531-875
               

               
Cow position:
               
chr19:40051195-40051545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
531-876
               

               
Cow position:
               
chr19:35073234-35073608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
531-887
               

               
Cow position:
               
chr19:22039972-22039605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
532-705
               

               
Cow position:
               
chr19:30917744-30917921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
532-731
               

               
Cow position:
               
chr19:12760901-12761106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
532-814
               

               
Cow position:
               
chr19:35321938-35322219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
532-821
               

               
Cow position:
               
chr19:4297884-4297591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
87, 128
               

               
Conread position:
               
532-827
               

               
Cow position:
               
chr19:44044-43750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
532-849
               

               
Cow position:
               
chr19:38411068-38410749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
532-874
               

               
Cow position:
               
chr19:29368592-29368247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr19:729549-729890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
532-886
               

               
Cow position:
               
chr19:23005160-23005528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 104
               

               
Conread position:
               
532-887
               

               
Cow position:
               
chr19:38842358-38842721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
533-673
               

               
Cow position:
               
chr19:4328675-4328823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
533-682
               

               
Cow position:
               
chr19:7594958-7595106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 133
               

               
Conread position:
               
533-697
               

               
Cow position:
               
chr19:31269034-31268873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
533-698
               

               
Cow position:
               
chr19:31268812-31268650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
533-727
               

               
Cow position:
               
chr19:2137630-2137824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 134
               

               
Conread position:
               
533-728
               

               
Cow position:
               
chr19:1614972-1614775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
84, 137
               

               
Conread position:
               
533-783
               

               
Cow position:
               
chr19:39795387-39795133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr19:13121088-13121371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
104, 133
               

               
Conread position:
               
533-841
               

               
Cow position:
               
chr19:39758720-39758413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
533-869
               

               
Cow position:
               
chr19:52158740-52158386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
533-887
               

               
Cow position:
               
chr19:6601518-6601872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
534-708
               

               
Cow position:
               
chr19:27968498-27968676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
534-723
               

               
Cow position:
               
chr19:5261537-5261338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
534-865
               

               
Cow position:
               
chr19:1355802-1355458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
534-873
               

               
Cow position:
               
chr19:55951967-55952306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
534-875
               

               
Cow position:
               
chr19:53658096-53657742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
535-710
               

               
Cow position:
               
chr19:43896497-43896326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
535-716
               

               
Cow position:
               
chr19:2793463-2793646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
85, 133
               

               
Conread position:
               
535-723
               

               
Cow position:
               
chr19:23559581-23559387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 141
               

               
Conread position:
               
535-733
               

               
Cow position:
               
chr19:35246142-35245937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
535-747
               

               
Cow position:
               
chr19:12279920-12279711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
535-747
               

               
Cow position:
               
chr19:37560011-37560212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
535-748
               

               
Cow position:
               
chr19:11211079-11211295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 138
               

               
Conread position:
               
535-767
               

               
Cow position:
               
chr19:26167719-26167951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
535-768
               

               
Cow position:
               
chr19:30007381-30007152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
535-770
               

               
Cow position:
               
chr19:19738199-19737957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
77, 138
               

               
Conread position:
               
535-773
               

               
Cow position:
               
chr19:23756555-23756787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
535-794
               

               
Cow position:
               
chr19:17355054-17354794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
535-805
               

               
Cow position:
               
chr19:25382486-25382760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 136
               

               
Conread position:
               
535-807
               

               
Cow position:
               
chr19:11194568-11194839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
62, 127
               

               
Conread position:
               
535-817
               

               
Cow position:
               
chr19:10970912-10971183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
144, 76
               

               
Conread position:
               
535-819
               

               
Cow position:
               
chr19:33575715-33575433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
535-826
               

               
Cow position:
               
chr19:39584144-39583844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 105
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr19:51194439-51194145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
535-852
               

               
Cow position:
               
chr19:36845440-36845119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
535-860
               

               
Cow position:
               
chr19:39622588-39622942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
74, 148
               

               
Conread position:
               
535-865
               

               
Cow position:
               
chr19:51620981-51621329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 138
               

               
Conread position:
               
535-870
               

               
Cow position:
               
chr19:5912761-5913108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 138
               

               
Conread position:
               
535-874
               

               
Cow position:
               
chr19:8864939-8864592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
535-874
               

               
Cow position:
               
chr19:24759692-24760038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr19:3621624-3621276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr19:10755496-10755160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr19:20661216-20661567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr19:26057355-26057700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
103, 63
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr19:43035439-43035087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 209
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr19:53371698-53372051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 137
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr19:55957372-55957742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
536-661
               

               
Cow position:
               
chr19:51970061-51970187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 80
               

               
Conread position:
               
536-700
               

               
Cow position:
               
chr19:10172525-10172365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
536-734
               

               
Cow position:
               
chr19:14581554-14581357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
536-742
               

               
Cow position:
               
chr19:13996230-13996443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
536-767
               

               
Cow position:
               
chr19:38732333-38732100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
76, 133
               

               
Conread position:
               
536-814
               

               
Cow position:
               
chr19:37466866-37467142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 137
               

               
Conread position:
               
536-824
               

               
Cow position:
               
chr19:40126970-40127261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
79, 135
               

               
Conread position:
               
536-827
               

               
Cow position:
               
chr19:5497188-5496889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
536-827
               

               
Cow position:
               
chr19:52750564-52750857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
536-887
               

               
Cow position:
               
chr19:50562877-50562508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
537-710
               

               
Cow position:
               
chr19:14823446-14823274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
537-723
               

               
Cow position:
               
chr19:42776627-42776437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
537-734
               

               
Cow position:
               
chr19:31729460-31729257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
537-734
               

               
Cow position:
               
chr19:41946915-41946710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
537-763
               

               
Cow position:
               
chr19:37406109-37405882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
537-788
               

               
Cow position:
               
chr19:20378842-20379089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
537-807
               

               
Cow position:
               
chr19:11559841-11560119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
83, 136
               

               
Conread position:
               
537-816
               

               
Cow position:
               
chr19:12052653-12052934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
537-816
               

               
Cow position:
               
chr19:12067938-12067657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
537-827
               

               
Cow position:
               
chr19:16659394-16659658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
247, 16
               

               
Conread position:
               
537-870
               

               
Cow position:
               
chr19:28554158-28554497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
537-875
               

               
Cow position:
               
chr19:46094433-46094794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
538-765
               

               
Cow position:
               
chr19:13325305-13325522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
540-758
               

               
Cow position:
               
chr19:25835146-25835357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
540-848
               

               
Cow position:
               
chr19:52187675-52187366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 128
               

               
Conread position:
               
540-870
               

               
Cow position:
               
chr19:2577751-2577424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
540-870
               

               
Cow position:
               
chr19:42904183-42903858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
205, 34
               

               
Conread position:
               
540-875
               

               
Cow position:
               
chr19:268539-268199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
540-875
               

               
Cow position:
               
chr19:12698508-12698169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
540-875
               

               
Cow position:
               
chr19:14253826-14253483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
541-722
               

               
Cow position:
               
chr19:6093664-6093490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 115
               

               
Conread position:
               
541-728
               

               
Cow position:
               
chr19:4586359-4586547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 127
               

               
Conread position:
               
541-756
               

               
Cow position:
               
chr19:32437714-32437925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
125, 66
               

               
Conread position:
               
541-784
               

               
Cow position:
               
chr19:28810126-28810373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
541-805
               

               
Cow position:
               
chr19:10238926-10238662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 131
               

               
Conread position:
               
541-808
               

               
Cow position:
               
chr19:42767913-42768176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
169, 112
               

               
Conread position:
               
541-866
               

               
Cow position:
               
chr19:43058728-43058390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 128
               

               
Conread position:
               
541-871
               

               
Cow position:
               
chr19:6417798-6417444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 128
               

               
Conread position:
               
541-874
               

               
Cow position:
               
chr19:11191431-11191772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
541-878
               

               
Cow position:
               
chr19:30471167-30471500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 126
               

               
Conread position:
               
541-885
               

               
Cow position:
               
chr19:3217193-3216852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
541-887
               

               
Cow position:
               
chr19:11376231-11376571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
264, 65
               

               
Conread position:
               
543-869
               

               
Cow position:
               
chr19:53542700-53543041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
549-716
               

               
Cow position:
               
chr19:38597249-38597082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
549-718
               

               
Cow position:
               
chr19:51637227-51637051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
549-749
               

               
Cow position:
               
chr19:34654428-34654631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
549-819
               

               
Cow position:
               
chr19:35870969-35870704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
549-849
               

               
Cow position:
               
chr19:387314-387022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
550-699
               

               
Cow position:
               
chr19:24068100-24068255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
550-704
               

               
Cow position:
               
chr19:28918591-28918434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 119
               

               
Conread position:
               
550-710
               

               
Cow position:
               
chr19:28137328-28137172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
550-722
               

               
Cow position:
               
chr19:41188017-41187845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
88, 111
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr19:39698468-39698287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
550-733
               

               
Cow position:
               
chr19:21224936-21224749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
550-733
               

               
Cow position:
               
chr19:29139386-29139198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
550-734
               

               
Cow position:
               
chr19:29958507-29958684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
550-734
               

               
Cow position:
               
chr19:31763677-31763485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
550-736
               

               
Cow position:
               
chr19:25927229-25927417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
550-769
               

               
Cow position:
               
chr19:35921032-35920812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
550-805
               

               
Cow position:
               
chr19:30227703-30227447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
550-807
               

               
Cow position:
               
chr19:39664394-39664655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
550-825
               

               
Cow position:
               
chr19:48744088-48744363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr19:26754219-26753941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr19:36139035-36138760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
116, 216
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr19:39648909-39649173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
183, 46
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr19:17664829-17664489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
68, 249
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr19:38111649-38111317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 123
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr19:55590416-55590082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
75, 169
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr19:56149882-56150224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
60, 117
               

               
Conread position:
               
550-876
               

               
Cow position:
               
chr19:30232891-30232573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr19:25673337-25673687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
551-807
               

               
Cow position:
               
chr19:6309742-6309993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
551-827
               

               
Cow position:
               
chr19:6687817-6688095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
551-827
               

               
Cow position:
               
chr19:43190109-43189830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 199
               

               
Conread position:
               
551-870
               

               
Cow position:
               
chr19:24137445-24137112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
551-873
               

               
Cow position:
               
chr19:25526459-25526132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
551-875
               

               
Cow position:
               
chr19:42564327-42563981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
551-876
               

               
Cow position:
               
chr19:17972088-17972412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
551-887
               

               
Cow position:
               
chr19:38637604-38637972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
552-656
               

               
Cow position:
               
chr19:14613250-14613144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
552-663
               

               
Cow position:
               
chr19:10177756-10177640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
552-689
               

               
Cow position:
               
chr19:41388939-41388801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
552-702
               

               
Cow position:
               
chr19:22836117-22836262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
552-703
               

               
Cow position:
               
chr19:6855096-6854943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
552-703
               

               
Cow position:
               
chr19:20517603-20517461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
552-705
               

               
Cow position:
               
chr19:12264135-12263987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
552-707
               

               
Cow position:
               
chr19:20694042-20693891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
552-708
               

               
Cow position:
               
chr19:22414088-22414246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
552-710
               

               
Cow position:
               
chr19:15244241-15244095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
552-710
               

               
Cow position:
               
chr19:33233761-33233601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 117
               

               
Conread position:
               
552-710
               

               
Cow position:
               
chr19:38009850-38009996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
552-716
               

               
Cow position:
               
chr19:24220327-24220488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
552-717
               

               
Cow position:
               
chr19:21790912-21790745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
552-722
               

               
Cow position:
               
chr19:35623572-35623400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
552-723
               

               
Cow position:
               
chr19:41343495-41343323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
552-724
               

               
Cow position:
               
chr19:12202470-12202637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
552-730
               

               
Cow position:
               
chr19:36177184-36177014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
552-731
               

               
Cow position:
               
chr19:9572990-9573166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
552-734
               

               
Cow position:
               
chr19:46822888-46822703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
552-736
               

               
Cow position:
               
chr19:11816544-11816731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
552-739
               

               
Cow position:
               
chr19:20425198-20425379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
552-747
               

               
Cow position:
               
chr19:8185384-8185184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
552-748
               

               
Cow position:
               
chr19:24693183-24692988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
552-763
               

               
Cow position:
               
chr19:23378856-23378641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 119
               

               
Conread position:
               
552-767
               

               
Cow position:
               
chr19:10930247-10930455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
552-767
               

               
Cow position:
               
chr19:38664135-38664359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 171
               

               
Conread position:
               
552-767
               

               
Cow position:
               
chr19:49290279-49290493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 111
               

               
Conread position:
               
552-773
               

               
Cow position:
               
chr19:10538379-10538596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
552-774
               

               
Cow position:
               
chr19:34757813-34758048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
552-775
               

               
Cow position:
               
chr19:5406680-5406451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
552-780
               

               
Cow position:
               
chr19:3857731-3857967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
552-797
               

               
Cow position:
               
chr19:37067312-37067072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
552-799
               

               
Cow position:
               
chr19:6344261-6344001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
552-801
               

               
Cow position:
               
chr19:41645529-41645290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
552-802
               

               
Cow position:
               
chr19:46694531-46694291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
170, 55
               

               
Conread position:
               
552-807
               

               
Cow position:
               
chr19:8965450-8965186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
552-807
               

               
Cow position:
               
chr19:43373227-43372968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
552-807
               

               
Cow position:
               
chr19:47184901-47185158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
552-809
               

               
Cow position:
               
chr19:7147877-7148143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 225
               

               
Conread position:
               
552-810
               

               
Cow position:
               
chr19:1978354-1978089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
161, 106
               

               
Conread position:
               
552-814
               

               
Cow position:
               
chr19:22872770-22873038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 195
               

               
Conread position:
               
552-823
               

               
Cow position:
               
chr19:43413958-43413686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
552-826
               

               
Cow position:
               
chr19:7637056-7637335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 121
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr19:750369-750112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
256, 61
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr19:12601981-12601714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
82, 114
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr19:14631862-14632133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
65, 115
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr19:19549376-19549646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr19:35540462-35540199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
115, 58
               

               
Conread position:
               
552-832
               

               
Cow position:
               
chr19:4459263-4459543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 110
               

               
Conread position:
               
552-840
               

               
Cow position:
               
chr19:55583715-55583418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 118
               

               
Conread position:
               
552-863
               

               
Cow position:
               
chr19:41024400-41024093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 115
               

               
Conread position:
               
552-864
               

               
Cow position:
               
chr19:8869754-8869435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
552-865
               

               
Cow position:
               
chr19:15091966-15092272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
552-869
               

               
Cow position:
               
chr19:25655065-25655383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
193, 66
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr19:6079171-6079511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
65, 159
               

               
Conread position:
               
552-871
               

               
Cow position:
               
chr19:24358081-24358380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
552-874
               

               
Cow position:
               
chr19:8128487-8128164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
552-874
               

               
Cow position:
               
chr19:43431143-43431476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
67, 127
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:3245876-3246205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:7668874-7668548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:10186686-10186347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:13130043-13129718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:13316231-13316565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:15067830-15068157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:16096374-16096705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:16621179-16621507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:20622836-20622498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:22765791-22765466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:32505929-32506269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:33903247-33903577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 112
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:34288194-34287870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:35380361-35380704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 226
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:38500335-38500013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:39576395-39576725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
252, 107
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:39751650-39751330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:46455020-46454699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr19:48723212-48722874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
552-876
               

               
Cow position:
               
chr19:1968142-1968460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
70, 112
               

               
Conread position:
               
552-877
               

               
Cow position:
               
chr19:25769853-25769508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 121
               

               
Conread position:
               
552-880
               

               
Cow position:
               
chr19:15853105-15852788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 115
               

               
Conread position:
               
552-885
               

               
Cow position:
               
chr19:10081267-10080903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr19:24145200-24144854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr19:31536287-31535962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
256, 7
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr19:34166547-34166197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr19:36245331-36245649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
257, 55
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr19:44838761-44839079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
259, 88
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr19:33033265-33033608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
553-726
               

               
Cow position:
               
chr19:22871078-22871253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
553-741
               

               
Cow position:
               
chr19:52728789-52728599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 119
               

               
Conread position:
               
553-749
               

               
Cow position:
               
chr19:11646742-11646546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
553-766
               

               
Cow position:
               
chr19:9390964-9391189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
553-767
               

               
Cow position:
               
chr19:34608021-34608236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 116
               

               
Conread position:
               
553-825
               

               
Cow position:
               
chr19:3497769-3498049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
553-827
               

               
Cow position:
               
chr19:5115714-5115973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
190, 65
               

               
Conread position:
               
553-827
               

               
Cow position:
               
chr19:22449739-22450028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
553-870
               

               
Cow position:
               
chr19:48960571-48960245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 104
               

               
Conread position:
               
553-871
               

               
Cow position:
               
chr19:22043179-22043502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
68, 116
               

               
Conread position:
               
553-874
               

               
Cow position:
               
chr19:35107694-35107375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
257, 32
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr19:2589693-2589351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr19:5185080-5185400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 117
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr19:35762077-35762407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 112
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr19:56063264-56063589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
209, 57
               

               
Conread position:
               
554-662
               

               
Cow position:
               
chr19:49959047-49958933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
554-672
               

               
Cow position:
               
chr19:22838438-22838310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
554-715
               

               
Cow position:
               
chr19:12686006-12685843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
554-716
               

               
Cow position:
               
chr19:47727245-47727405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
554-718
               

               
Cow position:
               
chr19:17260086-17259919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
554-731
               

               
Cow position:
               
chr19:26269048-26269237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
58, 124
               

               
Conread position:
               
554-736
               

               
Cow position:
               
chr19:25916083-25915904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
165, 109
               

               
Conread position:
               
554-750
               

               
Cow position:
               
chr19:25832023-25832221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
554-760
               

               
Cow position:
               
chr19:6854109-6854311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
554-766
               

               
Cow position:
               
chr19:39981916-39981699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
554-767
               

               
Cow position:
               
chr19:2068441-2068228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
554-774
               

               
Cow position:
               
chr19:23889309-23889533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
554-797
               

               
Cow position:
               
chr19:28037739-28037973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
554-824
               

               
Cow position:
               
chr19:18054082-18054340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 112
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr19:23394962-23394687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
554-828
               

               
Cow position:
               
chr19:23304312-23304586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 111
               

               
Conread position:
               
554-831
               

               
Cow position:
               
chr19:4987589-4987867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
554-866
               

               
Cow position:
               
chr19:50850012-50849676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
554-870
               

               
Cow position:
               
chr19:41946359-41946036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
554-870
               

               
Cow position:
               
chr19:54943143-54942823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 107
               

               
Conread position:
               
554-874
               

               
Cow position:
               
chr19:10213845-10213516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
554-874
               

               
Cow position:
               
chr19:47453608-47453282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr19:1153365-1153067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
219, 51
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr19:7031948-7032269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr19:20935930-20935599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 212
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr19:23784249-23784552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
204, 67
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr19:26975894-26976214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr19:40450179-40449861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
254, 56
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr19:47671911-47671595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr19:741997-742339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
555-705
               

               
Cow position:
               
chr19:24224510-24224362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
555-707
               

               
Cow position:
               
chr19:14252033-14252186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
555-709
               

               
Cow position:
               
chr19:12469638-12469791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
555-723
               

               
Cow position:
               
chr19:36978447-36978272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
555-728
               

               
Cow position:
               
chr19:18515863-18515685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 71
               

               
Conread position:
               
555-741
               

               
Cow position:
               
chr19:19916247-19916433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 112
               

               
Conread position:
               
555-790
               

               
Cow position:
               
chr19:14563542-14563308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
555-807
               

               
Cow position:
               
chr19:13488330-13488581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
173, 109
               

               
Conread position:
               
555-825
               

               
Cow position:
               
chr19:42517078-42517353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
555-837
               

               
Cow position:
               
chr19:25410678-25410947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
555-864
               

               
Cow position:
               
chr19:29115905-29115600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
223, 16
               

               
Conread position:
               
555-870
               

               
Cow position:
               
chr19:21378290-21378619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr19:21199326-21198980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr19:21817142-21816807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 111
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr19:29626076-29625751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 102
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr19:39361329-39360988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
555-877
               

               
Cow position:
               
chr19:36461371-36461684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
224, 8
               

               
Conread position:
               
556-706
               

               
Cow position:
               
chr19:4485973-4486128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
556-706
               

               
Cow position:
               
chr19:4602521-4602672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
556-708
               

               
Cow position:
               
chr19:32938034-32937882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
82, 114
               

               
Conread position:
               
556-826
               

               
Cow position:
               
chr19:24453333-24453606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
556-826
               

               
Cow position:
               
chr19:33988244-33987968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
65, 114
               

               
Conread position:
               
556-875
               

               
Cow position:
               
chr19:41585147-41584820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
557-711
               

               
Cow position:
               
chr19:7864229-7864074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
557-722
               

               
Cow position:
               
chr19:20543798-20543958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
557-728
               

               
Cow position:
               
chr19:35444330-35444507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
557-755
               

               
Cow position:
               
chr19:38021616-38021417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
557-759
               

               
Cow position:
               
chr19:26003458-26003646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
557-803
               

               
Cow position:
               
chr19:33913704-33913452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
557-813
               

               
Cow position:
               
chr19:25763279-25763029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
557-827
               

               
Cow position:
               
chr19:10929620-10929343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
557-827
               

               
Cow position:
               
chr19:31652735-31652463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
68, 116
               

               
Conread position:
               
559-744
               

               
Cow position:
               
chr19:19460608-19460425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
559-873
               

               
Cow position:
               
chr19:39103841-39104159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 107
               

               
Conread position:
               
563-796
               

               
Cow position:
               
chr19:39613004-39613235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
200, 97
               

               
Conread position:
               
563-807
               

               
Cow position:
               
chr19:28447608-28447364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
563-863
               

               
Cow position:
               
chr19:7741433-7741748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
563-875
               

               
Cow position:
               
chr19:7473860-7473543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
563-875
               

               
Cow position:
               
chr19:39057416-39057089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
564-827
               

               
Cow position:
               
chr19:51750999-51751268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
568-874
               

               
Cow position:
               
chr19:1664020-1664344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 113
               

               
Conread position:
               
569-834
               

               
Cow position:
               
chr19:3870762-3870499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
570-827
               

               
Cow position:
               
chr19:27612017-27612268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
573-875
               

               
Cow position:
               
chr19:10545548-10545860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
574-875
               

               
Cow position:
               
chr19:32457801-32457489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
574-876
               

               
Cow position:
               
chr19:15719468-15719773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
575-877
               

               
Cow position:
               
chr19:44143783-44144069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
579-740
               

               
Cow position:
               
chr19:24637379-24637220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
580-822
               

               
Cow position:
               
chr19:30910289-30910049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
580-827
               

               
Cow position:
               
chr19:47987008-47986758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
580-873
               

               
Cow position:
               
chr19:10242720-10242433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
580-875
               

               
Cow position:
               
chr19:23786327-23786038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
163, 52
               

               
Conread position:
               
586-772
               

               
Cow position:
               
chr19:15362552-15362745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
587-825
               

               
Cow position:
               
chr19:39254296-39254547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
587-874
               

               
Cow position:
               
chr19:39384896-39385191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
588-827
               

               
Cow position:
               
chr19:23832445-23832691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
590-827
               

               
Cow position:
               
chr19:34819044-34819288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
591-873
               

               
Cow position:
               
chr19:16567292-16567005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
592-822
               

               
Cow position:
               
chr19:41695522-41695758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
593-875
               

               
Cow position:
               
chr19:36722445-36722169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
595-887
               

               
Cow position:
               
chr19:23222763-23222469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
602-827
               

               
Cow position:
               
chr19:6516386-6516169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
166, 24
               

               
Conread position:
               
605-886
               

               
Cow position:
               
chr19:22134031-22134312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
608-873
               

               
Cow position:
               
chr19:12711755-12712029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
609-774
               

               
Cow position:
               
chr19:12705722-12705884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
609-784
               

               
Cow position:
               
chr19:28135683-28135509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
609-807
               

               
Cow position:
               
chr19:54915569-54915768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
609-873
               

               
Cow position:
               
chr19:17796015-17795744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-877
               

               
Cow position:
               
chr19:34001325-34001052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
609-878
               

               
Cow position:
               
chr19:53243360-53243631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
609-881
               

               
Cow position:
               
chr19:39485438-39485158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
612-875
               

               
Cow position:
               
chr19:8375186-8375460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
612-875
               

               
Cow position:
               
chr19:25652647-25652909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
612-886
               

               
Cow position:
               
chr19:7884693-7884416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
612-886
               

               
Cow position:
               
chr19:48475244-48474978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
613-873
               

               
Cow position:
               
chr19:47118385-47118648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
613-875
               

               
Cow position:
               
chr19:9541786-9542048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
613-875
               

               
Cow position:
               
chr19:14593172-14592899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
613-875
               

               
Cow position:
               
chr19:33469138-33468869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
613-875
               

               
Cow position:
               
chr19:36060053-36059781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
614-869
               

               
Cow position:
               
chr19:14348125-14347863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
614-870
               

               
Cow position:
               
chr19:19919348-19919611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr19:11424203-11424468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
614-877
               

               
Cow position:
               
chr19:33237288-33237019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
614-886
               

               
Cow position:
               
chr19:7404265-7404546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
194, 50
               

               
Conread position:
               
617-873
               

               
Cow position:
               
chr19:20984662-20984922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr19:5656017-5656260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
191, 9
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr19:16693920-16694199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr19:18786211-18786475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr19:34619918-34620185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr19:35742267-35742007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
194, 23
               

               
Conread position:
               
618-827
               

               
Cow position:
               
chr19:4800853-4800645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
618-875
               

               
Cow position:
               
chr19:25807197-25807457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
618-878
               

               
Cow position:
               
chr19:8033855-8033585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
190, 50
               

               
Conread position:
               
620-875
               

               
Cow position:
               
chr19:11443099-11442826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
621-807
               

               
Cow position:
               
chr19:39781627-39781441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
622-870
               

               
Cow position:
               
chr19:31846445-31846694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
623-827
               

               
Cow position:
               
chr19:8332405-8332198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
625-877
               

               
Cow position:
               
chr19:50682342-50682596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
626-863
               

               
Cow position:
               
chr19:43418508-43418268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
626-886
               

               
Cow position:
               
chr19:35808042-35808297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
627-886
               

               
Cow position:
               
chr19:42206034-42205768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
628-875
               

               
Cow position:
               
chr19:31595398-31595144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
181, 30
               

               
Conread position:
               
632-817
               

               
Cow position:
               
chr19:11212306-11212489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
172, 12
               

               
Conread position:
               
633-827
               

               
Cow position:
               
chr19:40026838-40027030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
140, 30
               

               
Conread position:
               
633-871
               

               
Cow position:
               
chr19:43441260-43441015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
175, 34
               

               
Conread position:
               
633-874
               

               
Cow position:
               
chr19:15862958-15863195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
635-874
               

               
Cow position:
               
chr19:990324-990573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr19:22798987-22799234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
636-877
               

               
Cow position:
               
chr19:30534018-30533788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
636-877
               

               
Cow position:
               
chr19:47110130-47109882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
175, 28
               

               
Conread position:
               
637-840
               

               
Cow position:
               
chr19:10676773-10676972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
644-886
               

               
Cow position:
               
chr19:2734531-2734285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
165, 23
               

               
Conread position:
               
649-875
               

               
Cow position:
               
chr19:4328977-4329198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
669-874
               

               
Cow position:
               
chr19:10173056-10173270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
669-887
               

               
Cow position:
               
chr19:31824954-31825181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
672-877
               

               
Cow position:
               
chr19:15936890-15936685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
673-874
               

               
Cow position:
               
chr19:12709755-12709968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 103
               

               
Conread position:
               
673-875
               

               
Cow position:
               
chr19:29070664-29070866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
154, 98
               

               
Conread position:
               
673-887
               

               
Cow position:
               
chr19:23403589-23403806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
687-875
               

               
Cow position:
               
chr19:10232368-10232567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
687-875
               

               
Cow position:
               
chr19:37646795-37646990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
695-874
               

               
Cow position:
               
chr19:10172034-10171847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
698-878
               

               
Cow position:
               
chr19:47727541-47727730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
703-874
               

               
Cow position:
               
chr19:14928631-14928810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
703-875
               

               
Cow position:
               
chr19:32451110-32450927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
91, 145
               

               
Conread position:
               
704-877
               

               
Cow position:
               
chr19:47187031-47187212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
713-875
               

               
Cow position:
               
chr19:39698079-39697916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
723-875
               

               
Cow position:
               
chr19:10286901-10286751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
753-887
               

               
Cow position:
               
chr19:37562028-37562167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               
Show alignments to all cow chromosomes.