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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8017D19.3
        

               
Conread position:
               
479-875
               

               
Cow position:
               
chr22:40349599-40349203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
483-873
               

               
Cow position:
               
chr22:3534181-3533799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
523-826
               

               
Cow position:
               
chr22:5837477-5837179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
100, 109
               

               
Conread position:
               
524-710
               

               
Cow position:
               
chr22:1384288-1384108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
524-870
               

               
Cow position:
               
chr22:11766833-11767192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
95, 152
               

               
Conread position:
               
526-821
               

               
Cow position:
               
chr22:30697359-30697078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
528-734
               

               
Cow position:
               
chr22:26417491-26417285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
137, 108
               

               
Conread position:
               
528-764
               

               
Cow position:
               
chr22:24134116-24134351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
529-716
               

               
Cow position:
               
chr22:29219695-29219885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
529-735
               

               
Cow position:
               
chr22:8447116-8446917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
530-693
               

               
Cow position:
               
chr22:16140732-16140567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
530-709
               

               
Cow position:
               
chr22:13930489-13930307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
530-716
               

               
Cow position:
               
chr22:16564354-16564168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
142, 133
               

               
Conread position:
               
530-716
               

               
Cow position:
               
chr22:43130932-43131123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 149
               

               
Conread position:
               
530-732
               

               
Cow position:
               
chr22:2704508-2704302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
530-736
               

               
Cow position:
               
chr22:6372151-6372346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
530-744
               

               
Cow position:
               
chr22:26233840-26233624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
530-753
               

               
Cow position:
               
chr22:8535884-8535657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
530-774
               

               
Cow position:
               
chr22:3470494-3470249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
530-825
               

               
Cow position:
               
chr22:31870049-31870339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
530-827
               

               
Cow position:
               
chr22:19891169-19890870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
530-849
               

               
Cow position:
               
chr22:19459831-19460158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 237
               

               
Conread position:
               
530-864
               

               
Cow position:
               
chr22:44410927-44410590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
530-873
               

               
Cow position:
               
chr22:43131345-43131696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 111
               

               
Conread position:
               
530-878
               

               
Cow position:
               
chr22:30269608-30269263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 10
               

               
Conread position:
               
530-886
               

               
Cow position:
               
chr22:38939743-38940108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
175, 86
               

               
Conread position:
               
531-716
               

               
Cow position:
               
chr22:39471947-39472138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
81, 123
               

               
Conread position:
               
531-728
               

               
Cow position:
               
chr22:1045981-1046184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
531-733
               

               
Cow position:
               
chr22:16340062-16339858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 111
               

               
Conread position:
               
531-805
               

               
Cow position:
               
chr22:28672341-28672078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
531-827
               

               
Cow position:
               
chr22:7165176-7164871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
531-827
               

               
Cow position:
               
chr22:15914838-15915132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 171
               

               
Conread position:
               
531-827
               

               
Cow position:
               
chr22:24903796-24903499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
531-875
               

               
Cow position:
               
chr22:12800882-12800516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 134
               

               
Conread position:
               
531-885
               

               
Cow position:
               
chr22:11813517-11813879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
531-887
               

               
Cow position:
               
chr22:5016700-5016354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
532-724
               

               
Cow position:
               
chr22:45788813-45788622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
532-734
               

               
Cow position:
               
chr22:23630149-23630349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
532-748
               

               
Cow position:
               
chr22:10682313-10682527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
194, 8
               

               
Conread position:
               
532-755
               

               
Cow position:
               
chr22:2876591-2876817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
84, 138
               

               
Conread position:
               
532-809
               

               
Cow position:
               
chr22:21527115-21526849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
532-822
               

               
Cow position:
               
chr22:2095763-2095471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 233
               

               
Conread position:
               
532-827
               

               
Cow position:
               
chr22:5291061-5290759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
532-827
               

               
Cow position:
               
chr22:9372733-9372432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 143
               

               
Conread position:
               
532-827
               

               
Cow position:
               
chr22:17652638-17652343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
532-870
               

               
Cow position:
               
chr22:34736052-34735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
532-874
               

               
Cow position:
               
chr22:8733139-8733477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 101
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr22:1485073-1484715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 260
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr22:3566373-3566029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
532-888
               

               
Cow position:
               
chr22:15618814-15618453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
92, 141
               

               
Conread position:
               
533-637
               

               
Cow position:
               
chr22:29345793-29345689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
533-709
               

               
Cow position:
               
chr22:1552101-1551928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
533-734
               

               
Cow position:
               
chr22:1065313-1065107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 139
               

               
Conread position:
               
533-741
               

               
Cow position:
               
chr22:10371845-10371626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
533-741
               

               
Cow position:
               
chr22:33485418-33485621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
533-748
               

               
Cow position:
               
chr22:14488143-14487923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
533-763
               

               
Cow position:
               
chr22:28937736-28937959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
533-823
               

               
Cow position:
               
chr22:12749707-12749985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
533-826
               

               
Cow position:
               
chr22:1106276-1105976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 140
               

               
Conread position:
               
533-826
               

               
Cow position:
               
chr22:1326624-1326330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
533-826
               

               
Cow position:
               
chr22:27275671-27275375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 139
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr22:3430401-3430097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr22:23758803-23759103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 139
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr22:23806332-23806632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 135
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr22:27619943-27619639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 133
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr22:36539453-36539754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
533-849
               

               
Cow position:
               
chr22:11696989-11697309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
533-869
               

               
Cow position:
               
chr22:10983568-10983207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
533-871
               

               
Cow position:
               
chr22:8883216-8882875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
82, 136
               

               
Conread position:
               
533-874
               

               
Cow position:
               
chr22:38978048-38977701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
533-886
               

               
Cow position:
               
chr22:15950185-15950538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
533-887
               

               
Cow position:
               
chr22:21905672-21905334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
533-887
               

               
Cow position:
               
chr22:27826054-27825678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
534-707
               

               
Cow position:
               
chr22:11836869-11837035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr22:6754059-6754297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
534-807
               

               
Cow position:
               
chr22:20323440-20323719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 134
               

               
Conread position:
               
534-821
               

               
Cow position:
               
chr22:2109425-2109703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
100, 133
               

               
Conread position:
               
534-826
               

               
Cow position:
               
chr22:4533664-4533963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 99
               

               
Conread position:
               
534-827
               

               
Cow position:
               
chr22:32661719-32661419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
88, 144
               

               
Conread position:
               
534-875
               

               
Cow position:
               
chr22:7967901-7967554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
534-883
               

               
Cow position:
               
chr22:4156877-4157230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
534-886
               

               
Cow position:
               
chr22:18926561-18926196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
534-886
               

               
Cow position:
               
chr22:41898244-41898605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
534-887
               

               
Cow position:
               
chr22:15490860-15490499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 137
               

               
Conread position:
               
534-888
               

               
Cow position:
               
chr22:29642317-29641953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
535-709
               

               
Cow position:
               
chr22:21041952-21042119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
535-710
               

               
Cow position:
               
chr22:3388932-3388767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 39
               

               
Conread position:
               
535-723
               

               
Cow position:
               
chr22:26268051-26267860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
535-734
               

               
Cow position:
               
chr22:4736229-4736025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
535-734
               

               
Cow position:
               
chr22:5375598-5375396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
535-735
               

               
Cow position:
               
chr22:40864690-40864503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
171, 87
               

               
Conread position:
               
535-761
               

               
Cow position:
               
chr22:23265445-23265677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 132
               

               
Conread position:
               
535-767
               

               
Cow position:
               
chr22:4156612-4156848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
535-768
               

               
Cow position:
               
chr22:876465-876244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
535-773
               

               
Cow position:
               
chr22:8357781-8357551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
535-775
               

               
Cow position:
               
chr22:39446498-39446254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
535-806
               

               
Cow position:
               
chr22:30607063-30606797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
84, 138
               

               
Conread position:
               
535-807
               

               
Cow position:
               
chr22:6176078-6176358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
535-822
               

               
Cow position:
               
chr22:14214164-14214448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr22:285163-285449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr22:25809077-25809360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
97, 131
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr22:26150911-26151202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr22:27828580-27828294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr22:39215408-39215706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 242
               

               
Conread position:
               
535-850
               

               
Cow position:
               
chr22:1651693-1651383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
535-852
               

               
Cow position:
               
chr22:12981521-12981839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 135
               

               
Conread position:
               
535-869
               

               
Cow position:
               
chr22:17852434-17852766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 133
               

               
Conread position:
               
535-870
               

               
Cow position:
               
chr22:2470034-2470385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 130
               

               
Conread position:
               
535-870
               

               
Cow position:
               
chr22:37139632-37139297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
535-870
               

               
Cow position:
               
chr22:40387355-40387017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
99, 134
               

               
Conread position:
               
535-872
               

               
Cow position:
               
chr22:8138051-8138402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 135
               

               
Conread position:
               
535-874
               

               
Cow position:
               
chr22:15567819-15568160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 6
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr22:1289326-1289662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 134
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr22:6096813-6097172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr22:12316011-12315664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 132
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr22:12573409-12573061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr22:25943663-25943329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
273, 71
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr22:32698967-32698613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 138
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr22:41854107-41853749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr22:1309534-1309886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr22:5384838-5384493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
208, 65
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr22:19047628-19047977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
273, 75
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr22:22613306-22612952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
536-662
               

               
Cow position:
               
chr22:1987174-1987043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
536-734
               

               
Cow position:
               
chr22:6106168-6106374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
536-737
               

               
Cow position:
               
chr22:45012559-45012754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
98, 129
               

               
Conread position:
               
536-776
               

               
Cow position:
               
chr22:4656843-4657083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 134
               

               
Conread position:
               
536-823
               

               
Cow position:
               
chr22:34619012-34618710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
109, 247
               

               
Conread position:
               
536-827
               

               
Cow position:
               
chr22:42685085-42684817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
271, 102
               

               
Conread position:
               
536-874
               

               
Cow position:
               
chr22:22860708-22861055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
536-875
               

               
Cow position:
               
chr22:11601238-11600891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
78, 111
               

               
Conread position:
               
536-875
               

               
Cow position:
               
chr22:11613629-11613277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
536-875
               

               
Cow position:
               
chr22:25205763-25206113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
536-877
               

               
Cow position:
               
chr22:42612644-42612312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
237, 71
               

               
Conread position:
               
536-886
               

               
Cow position:
               
chr22:34616518-34616145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
537-709
               

               
Cow position:
               
chr22:30684926-30684756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
537-715
               

               
Cow position:
               
chr22:24890422-24890243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
86, 132
               

               
Conread position:
               
537-733
               

               
Cow position:
               
chr22:12673131-12673332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
537-807
               

               
Cow position:
               
chr22:43965904-43965629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
537-819
               

               
Cow position:
               
chr22:17359674-17359398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
537-823
               

               
Cow position:
               
chr22:16541448-16541738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
537-827
               

               
Cow position:
               
chr22:6852379-6852673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 136
               

               
Conread position:
               
537-837
               

               
Cow position:
               
chr22:1984059-1983751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
75, 142
               

               
Conread position:
               
537-869
               

               
Cow position:
               
chr22:4060746-4061087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 132
               

               
Conread position:
               
537-870
               

               
Cow position:
               
chr22:36132999-36132656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
537-874
               

               
Cow position:
               
chr22:14690757-14691118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
537-875
               

               
Cow position:
               
chr22:32327000-32326656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
537-876
               

               
Cow position:
               
chr22:10567517-10567848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
537-876
               

               
Cow position:
               
chr22:21568192-21567847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
537-887
               

               
Cow position:
               
chr22:18025353-18025718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
537-887
               

               
Cow position:
               
chr22:34895157-34894812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
538-875
               

               
Cow position:
               
chr22:4357284-4356947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
538-887
               

               
Cow position:
               
chr22:29954813-29955155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
539-870
               

               
Cow position:
               
chr22:19341393-19341061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
539-875
               

               
Cow position:
               
chr22:8877450-8877129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
540-715
               

               
Cow position:
               
chr22:11497693-11497515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
540-719
               

               
Cow position:
               
chr22:9735467-9735286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
540-731
               

               
Cow position:
               
chr22:16346592-16346401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 126
               

               
Conread position:
               
540-748
               

               
Cow position:
               
chr22:10557471-10557268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
540-766
               

               
Cow position:
               
chr22:26804021-26803788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
540-814
               

               
Cow position:
               
chr22:22013948-22013675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 132
               

               
Conread position:
               
540-826
               

               
Cow position:
               
chr22:7082228-7081941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 204
               

               
Conread position:
               
540-827
               

               
Cow position:
               
chr22:27635679-27635386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
540-837
               

               
Cow position:
               
chr22:10416425-10416129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
540-873
               

               
Cow position:
               
chr22:6149189-6149527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 231
               

               
Conread position:
               
540-875
               

               
Cow position:
               
chr22:18259415-18259077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
541-708
               

               
Cow position:
               
chr22:13891773-13891608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
541-710
               

               
Cow position:
               
chr22:1304357-1304527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 117
               

               
Conread position:
               
541-710
               

               
Cow position:
               
chr22:12741085-12741246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
541-726
               

               
Cow position:
               
chr22:38815004-38815189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
541-734
               

               
Cow position:
               
chr22:12777186-12777375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
541-747
               

               
Cow position:
               
chr22:33948779-33948984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
81, 126
               

               
Conread position:
               
541-762
               

               
Cow position:
               
chr22:11352248-11352478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
75, 134
               

               
Conread position:
               
541-769
               

               
Cow position:
               
chr22:7361777-7362010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 133
               

               
Conread position:
               
541-785
               

               
Cow position:
               
chr22:12188276-12188528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
541-785
               

               
Cow position:
               
chr22:12195362-12195615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
74, 137
               

               
Conread position:
               
541-813
               

               
Cow position:
               
chr22:4132775-4132495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 131
               

               
Conread position:
               
541-827
               

               
Cow position:
               
chr22:27508839-27508560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
219, 70
               

               
Conread position:
               
541-847
               

               
Cow position:
               
chr22:12678223-12678526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 124
               

               
Conread position:
               
541-853
               

               
Cow position:
               
chr22:44741268-44740967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
541-859
               

               
Cow position:
               
chr22:26017562-26017857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
541-866
               

               
Cow position:
               
chr22:16094708-16095039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
541-874
               

               
Cow position:
               
chr22:13286646-13286304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr22:8324446-8324102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
70, 106
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr22:18020833-18021168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr22:44717918-44717566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
541-876
               

               
Cow position:
               
chr22:10338908-10339261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 145
               

               
Conread position:
               
541-879
               

               
Cow position:
               
chr22:15668285-15668625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
215, 80
               

               
Conread position:
               
541-886
               

               
Cow position:
               
chr22:644583-644920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 36
               

               
Conread position:
               
541-886
               

               
Cow position:
               
chr22:26339962-26339597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 235
               

               
Conread position:
               
542-734
               

               
Cow position:
               
chr22:43573146-43572945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
546-870
               

               
Cow position:
               
chr22:13669974-13670316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
547-744
               

               
Cow position:
               
chr22:18847779-18847969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
549-730
               

               
Cow position:
               
chr22:28493091-28493273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
549-738
               

               
Cow position:
               
chr22:7518744-7518553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
549-741
               

               
Cow position:
               
chr22:6360003-6360189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
549-870
               

               
Cow position:
               
chr22:30515458-30515110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
549-875
               

               
Cow position:
               
chr22:20627023-20626694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
550-657
               

               
Cow position:
               
chr22:44642435-44642325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
550-700
               

               
Cow position:
               
chr22:11790175-11790019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
550-702
               

               
Cow position:
               
chr22:9075600-9075441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
550-709
               

               
Cow position:
               
chr22:1074456-1074291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 123
               

               
Conread position:
               
550-710
               

               
Cow position:
               
chr22:13951451-13951289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
550-716
               

               
Cow position:
               
chr22:3540931-3541098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
550-724
               

               
Cow position:
               
chr22:27401922-27401749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr22:14601986-14602164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
550-733
               

               
Cow position:
               
chr22:10913847-10913666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
550-733
               

               
Cow position:
               
chr22:14676877-14676688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 126
               

               
Conread position:
               
550-734
               

               
Cow position:
               
chr22:35578587-35578775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 121
               

               
Conread position:
               
550-739
               

               
Cow position:
               
chr22:26189061-26188867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 122
               

               
Conread position:
               
550-741
               

               
Cow position:
               
chr22:3257478-3257663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
550-762
               

               
Cow position:
               
chr22:14600144-14600360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
550-765
               

               
Cow position:
               
chr22:35215740-35215519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
550-767
               

               
Cow position:
               
chr22:17198327-17198106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
550-772
               

               
Cow position:
               
chr22:1776252-1776023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 122
               

               
Conread position:
               
550-772
               

               
Cow position:
               
chr22:5712773-5712552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
550-774
               

               
Cow position:
               
chr22:6289310-6289540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 223
               

               
Conread position:
               
550-784
               

               
Cow position:
               
chr22:7496918-7497156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
62, 123
               

               
Conread position:
               
550-785
               

               
Cow position:
               
chr22:12447637-12447409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
550-790
               

               
Cow position:
               
chr22:16235312-16235558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 124
               

               
Conread position:
               
550-800
               

               
Cow position:
               
chr22:2075814-2076070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
550-804
               

               
Cow position:
               
chr22:8540064-8539823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 118
               

               
Conread position:
               
550-805
               

               
Cow position:
               
chr22:13866857-13866595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 123
               

               
Conread position:
               
550-807
               

               
Cow position:
               
chr22:1588484-1588225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 220
               

               
Conread position:
               
550-807
               

               
Cow position:
               
chr22:18193656-18193393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
550-807
               

               
Cow position:
               
chr22:18545475-18545219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
115, 90
               

               
Conread position:
               
550-807
               

               
Cow position:
               
chr22:25247098-25246847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
81, 111
               

               
Conread position:
               
550-825
               

               
Cow position:
               
chr22:3987711-3987429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
550-825
               

               
Cow position:
               
chr22:5467176-5467455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
155, 76
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr22:14142935-14143202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
258, 90
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr22:23180857-23181130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr22:41044720-41045001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 24
               

               
Conread position:
               
550-829
               

               
Cow position:
               
chr22:34609185-34608911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
550-843
               

               
Cow position:
               
chr22:23735823-23736126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
550-844
               

               
Cow position:
               
chr22:27577934-27577632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
550-851
               

               
Cow position:
               
chr22:3282640-3282935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
550-857
               

               
Cow position:
               
chr22:12929089-12929404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
550-863
               

               
Cow position:
               
chr22:36560461-36560792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
550-865
               

               
Cow position:
               
chr22:27681913-27681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
550-870
               

               
Cow position:
               
chr22:16291744-16292059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
258, 81
               

               
Conread position:
               
550-872
               

               
Cow position:
               
chr22:7913643-7913335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
240, 77
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr22:5595619-5595941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
54, 123
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr22:6092474-6092794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr22:10532682-10532355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr22:10981574-10981240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
79, 121
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr22:12313608-12313276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr22:16533261-16532933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr22:33447889-33448231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr22:40120684-40121025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
550-876
               

               
Cow position:
               
chr22:1653997-1654342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
75, 118
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr22:6622062-6622406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
551-694
               

               
Cow position:
               
chr22:12207519-12207664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
551-724
               

               
Cow position:
               
chr22:3937250-3937072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
551-733
               

               
Cow position:
               
chr22:6203139-6202951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
551-807
               

               
Cow position:
               
chr22:46665308-46665565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 191
               

               
Conread position:
               
551-825
               

               
Cow position:
               
chr22:12829422-12829699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
551-827
               

               
Cow position:
               
chr22:21746826-21746553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
551-827
               

               
Cow position:
               
chr22:37030336-37030611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
551-828
               

               
Cow position:
               
chr22:39602473-39602190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
551-852
               

               
Cow position:
               
chr22:4075697-4076013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
551-875
               

               
Cow position:
               
chr22:34441444-34441778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 120
               

               
Conread position:
               
551-875
               

               
Cow position:
               
chr22:46610589-46610927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 225
               

               
Conread position:
               
552-683
               

               
Cow position:
               
chr22:29546824-29546692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
552-707
               

               
Cow position:
               
chr22:10594797-10594637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
552-710
               

               
Cow position:
               
chr22:2201921-2201766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
552-710
               

               
Cow position:
               
chr22:15006925-15007085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
552-719
               

               
Cow position:
               
chr22:2436436-2436601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
552-720
               

               
Cow position:
               
chr22:43730469-43730302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 109
               

               
Conread position:
               
552-723
               

               
Cow position:
               
chr22:18145722-18145548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
552-724
               

               
Cow position:
               
chr22:1959425-1959248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
552-724
               

               
Cow position:
               
chr22:29135142-29134970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
552-731
               

               
Cow position:
               
chr22:14141154-14141337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 119
               

               
Conread position:
               
552-733
               

               
Cow position:
               
chr22:30687206-30687029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
552-734
               

               
Cow position:
               
chr22:14641669-14641855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 120
               

               
Conread position:
               
552-734
               

               
Cow position:
               
chr22:44684662-44684489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
552-735
               

               
Cow position:
               
chr22:2184529-2184711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
552-735
               

               
Cow position:
               
chr22:27580238-27580412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
552-739
               

               
Cow position:
               
chr22:1830230-1830044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
552-741
               

               
Cow position:
               
chr22:8327928-8327741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
552-744
               

               
Cow position:
               
chr22:7584056-7584244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
552-747
               

               
Cow position:
               
chr22:1821402-1821596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
552-748
               

               
Cow position:
               
chr22:4164166-4163967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
552-748
               

               
Cow position:
               
chr22:16813982-16813786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
552-748
               

               
Cow position:
               
chr22:26112554-26112354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
552-766
               

               
Cow position:
               
chr22:47562898-47562673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 118
               

               
Conread position:
               
552-771
               

               
Cow position:
               
chr22:243289-243078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
552-775
               

               
Cow position:
               
chr22:25732776-25733006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
552-781
               

               
Cow position:
               
chr22:23372672-23372908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
552-784
               

               
Cow position:
               
chr22:4054416-4054632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
222, 62
               

               
Conread position:
               
552-788
               

               
Cow position:
               
chr22:23675786-23676015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 64
               

               
Conread position:
               
552-812
               

               
Cow position:
               
chr22:8287367-8287118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 109
               

               
Conread position:
               
552-819
               

               
Cow position:
               
chr22:21397729-21397987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
191, 18
               

               
Conread position:
               
552-823
               

               
Cow position:
               
chr22:530391-530653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
552-825
               

               
Cow position:
               
chr22:7154062-7153798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
256, 66
               

               
Conread position:
               
552-825
               

               
Cow position:
               
chr22:25254361-25254087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
552-826
               

               
Cow position:
               
chr22:2408942-2409209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
552-826
               

               
Cow position:
               
chr22:14178645-14178914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr22:18838437-18838160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
552-854
               

               
Cow position:
               
chr22:1849262-1848945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
552-861
               

               
Cow position:
               
chr22:19827674-19827998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
552-864
               

               
Cow position:
               
chr22:31599619-31599314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 119
               

               
Conread position:
               
552-865
               

               
Cow position:
               
chr22:21325549-21325871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
552-865
               

               
Cow position:
               
chr22:45808016-45807703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
552-867
               

               
Cow position:
               
chr22:17949790-17950102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
552-869
               

               
Cow position:
               
chr22:34632338-34631996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 243
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr22:3250793-3251135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr22:6720894-6721215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr22:25236942-25237292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr22:25361664-25361345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
215, 69
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr22:32480280-32480621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 248
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr22:40048745-40048414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
65, 122
               

               
Conread position:
               
552-873
               

               
Cow position:
               
chr22:10122555-10122246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
552-873
               

               
Cow position:
               
chr22:36633387-36633085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
206, 23
               

               
Conread position:
               
552-874
               

               
Cow position:
               
chr22:4535135-4535470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
552-874
               

               
Cow position:
               
chr22:4583748-4583411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 111
               

               
Conread position:
               
552-874
               

               
Cow position:
               
chr22:16251378-16251711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 165
               

               
Conread position:
               
552-874
               

               
Cow position:
               
chr22:30699352-30699033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 65
               

               
Conread position:
               
552-874
               

               
Cow position:
               
chr22:37029418-37029745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
552-874
               

               
Cow position:
               
chr22:41245418-41245099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
173, 16
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:534676-534350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:864343-864665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
103, 83
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:2404067-2403729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:3842804-3842484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:4373221-4372898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:4563543-4563215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
147, 69
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:8090348-8090675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:12803201-12803532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
84, 114
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:13957458-13957792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:17152875-17152534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:21012572-21012243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:25742779-25743098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:27047209-27047548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 178
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:28357214-28356892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:30818396-30818064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 98
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:37202035-37201706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 116
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:39507853-39508189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:40072149-40071834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:43398186-43397866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:43812254-43812566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr22:45796531-45796196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
552-876
               

               
Cow position:
               
chr22:6709603-6709923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 87
               

               
Conread position:
               
552-876
               

               
Cow position:
               
chr22:38438971-38439302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
552-877
               

               
Cow position:
               
chr22:3367383-3367042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
552-877
               

               
Cow position:
               
chr22:27171082-27171404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr22:10295215-10294885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr22:10684911-10685247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr22:14245251-14245593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 157
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr22:21205490-21205185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
256, 25
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr22:23249550-23249867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
150, 69
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr22:27274502-27274848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 200
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr22:28371118-28370786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
163, 64
               

               
Conread position:
               
552-887
               

               
Cow position:
               
chr22:34726862-34726514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
553-719
               

               
Cow position:
               
chr22:20472187-20472345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
553-805
               

               
Cow position:
               
chr22:15737416-15737166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
553-807
               

               
Cow position:
               
chr22:2100763-2101015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
553-807
               

               
Cow position:
               
chr22:26056681-26056938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
553-826
               

               
Cow position:
               
chr22:23980021-23980300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
553-863
               

               
Cow position:
               
chr22:8418650-8418331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
68, 93
               

               
Conread position:
               
553-870
               

               
Cow position:
               
chr22:41970971-41971299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr22:6327588-6327913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
553-875
               

               
Cow position:
               
chr22:39696483-39696144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
553-876
               

               
Cow position:
               
chr22:42635246-42635579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
553-887
               

               
Cow position:
               
chr22:2524136-2523808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
554-709
               

               
Cow position:
               
chr22:36762223-36762065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
554-731
               

               
Cow position:
               
chr22:35533044-35533227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 123
               

               
Conread position:
               
554-734
               

               
Cow position:
               
chr22:7067640-7067447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
554-741
               

               
Cow position:
               
chr22:4628747-4628548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 128
               

               
Conread position:
               
554-744
               

               
Cow position:
               
chr22:1523407-1523210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
554-756
               

               
Cow position:
               
chr22:24542549-24542342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
554-767
               

               
Cow position:
               
chr22:16806772-16806564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
554-769
               

               
Cow position:
               
chr22:17129188-17128977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
554-804
               

               
Cow position:
               
chr22:13719850-13720087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
80, 106
               

               
Conread position:
               
554-805
               

               
Cow position:
               
chr22:1501067-1500823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
159, 18
               

               
Conread position:
               
554-815
               

               
Cow position:
               
chr22:12157664-12157919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
554-819
               

               
Cow position:
               
chr22:42618180-42617918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr22:899023-898753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 112
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr22:5616481-5616218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr22:12389287-12389007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr22:14372352-14372096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr22:16621377-16621086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr22:26786543-26786265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr22:27267739-27267450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 200
               

               
Conread position:
               
554-828
               

               
Cow position:
               
chr22:1659352-1659071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
554-829
               

               
Cow position:
               
chr22:25690093-25690373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
102, 113
               

               
Conread position:
               
554-840
               

               
Cow position:
               
chr22:12892176-12892478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 124
               

               
Conread position:
               
554-873
               

               
Cow position:
               
chr22:25221718-25222044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
554-873
               

               
Cow position:
               
chr22:40789742-40789424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr22:1975805-1975465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr22:6215372-6215704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr22:6610173-6610496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr22:9127583-9127259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr22:30094428-30094098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr22:33399304-33399628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 115
               

               
Conread position:
               
554-887
               

               
Cow position:
               
chr22:40374791-40374448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
554-888
               

               
Cow position:
               
chr22:10162152-10161806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
555-734
               

               
Cow position:
               
chr22:6793696-6793872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
555-761
               

               
Cow position:
               
chr22:2644117-2643905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
555-762
               

               
Cow position:
               
chr22:29842537-29842730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
555-826
               

               
Cow position:
               
chr22:9597401-9597669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
555-826
               

               
Cow position:
               
chr22:17126631-17126368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
555-827
               

               
Cow position:
               
chr22:10631572-10631294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
555-827
               

               
Cow position:
               
chr22:27066567-27066302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 119
               

               
Conread position:
               
555-852
               

               
Cow position:
               
chr22:10609541-10609230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
555-866
               

               
Cow position:
               
chr22:7882734-7882416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
555-870
               

               
Cow position:
               
chr22:27730226-27729909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 120
               

               
Conread position:
               
555-875
               

               
Cow position:
               
chr22:14378508-14378826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
60, 124
               

               
Conread position:
               
556-703
               

               
Cow position:
               
chr22:33565912-33566061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
556-707
               

               
Cow position:
               
chr22:19549024-19548884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
556-728
               

               
Cow position:
               
chr22:45771843-45772016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
556-741
               

               
Cow position:
               
chr22:8331183-8330993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
556-762
               

               
Cow position:
               
chr22:40870013-40869807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
556-780
               

               
Cow position:
               
chr22:32514479-32514247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
556-811
               

               
Cow position:
               
chr22:12902673-12902921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 107
               

               
Conread position:
               
556-826
               

               
Cow position:
               
chr22:4162400-4162675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 137
               

               
Conread position:
               
556-848
               

               
Cow position:
               
chr22:1911833-1911550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
556-868
               

               
Cow position:
               
chr22:3301153-3301464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
556-875
               

               
Cow position:
               
chr22:11131052-11130723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 113
               

               
Conread position:
               
556-887
               

               
Cow position:
               
chr22:36432788-36433130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
557-706
               

               
Cow position:
               
chr22:26931043-26930891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
557-725
               

               
Cow position:
               
chr22:10468692-10468522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
557-747
               

               
Cow position:
               
chr22:11189212-11189020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
557-770
               

               
Cow position:
               
chr22:30642951-30643168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
557-864
               

               
Cow position:
               
chr22:8412712-8412392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 115
               

               
Conread position:
               
557-870
               

               
Cow position:
               
chr22:41829053-41829372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
557-874
               

               
Cow position:
               
chr22:590501-590193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
271, 46
               

               
Conread position:
               
557-875
               

               
Cow position:
               
chr22:28146864-28146537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
557-875
               

               
Cow position:
               
chr22:30484086-30483770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
557-887
               

               
Cow position:
               
chr22:31646665-31646334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
559-873
               

               
Cow position:
               
chr22:20862584-20862906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
560-693
               

               
Cow position:
               
chr22:6127999-6128134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
560-864
               

               
Cow position:
               
chr22:45513345-45513651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
563-736
               

               
Cow position:
               
chr22:19645431-19645593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
563-807
               

               
Cow position:
               
chr22:35029435-35029197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
210, 69
               

               
Conread position:
               
563-825
               

               
Cow position:
               
chr22:18933535-18933808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
563-870
               

               
Cow position:
               
chr22:14365776-14366092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
563-870
               

               
Cow position:
               
chr22:28639980-28640292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
563-875
               

               
Cow position:
               
chr22:24066064-24066381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
563-875
               

               
Cow position:
               
chr22:41982543-41982862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
563-887
               

               
Cow position:
               
chr22:15068605-15068267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
564-710
               

               
Cow position:
               
chr22:16655564-16655712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 104
               

               
Conread position:
               
565-732
               

               
Cow position:
               
chr22:1991771-1991603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
565-875
               

               
Cow position:
               
chr22:15039006-15039329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
565-887
               

               
Cow position:
               
chr22:15024935-15025269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 110
               

               
Conread position:
               
566-728
               

               
Cow position:
               
chr22:7512792-7512623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
566-736
               

               
Cow position:
               
chr22:23780399-23780568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
566-827
               

               
Cow position:
               
chr22:47556026-47555761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
56, 109
               

               
Conread position:
               
567-846
               

               
Cow position:
               
chr22:14006342-14006071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
239, 56
               

               
Conread position:
               
567-875
               

               
Cow position:
               
chr22:29289977-29290280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
568-827
               

               
Cow position:
               
chr22:14509320-14509556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
241, 46
               

               
Conread position:
               
568-887
               

               
Cow position:
               
chr22:12681627-12681955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
570-809
               

               
Cow position:
               
chr22:1350001-1349753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
570-825
               

               
Cow position:
               
chr22:43237238-43237495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
572-875
               

               
Cow position:
               
chr22:5337450-5337743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
236, 40
               

               
Conread position:
               
573-875
               

               
Cow position:
               
chr22:32892865-32892552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
575-732
               

               
Cow position:
               
chr22:12446561-12446713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
575-861
               

               
Cow position:
               
chr22:4119399-4119698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
580-726
               

               
Cow position:
               
chr22:1320654-1320504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
580-860
               

               
Cow position:
               
chr22:27581593-27581305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
580-864
               

               
Cow position:
               
chr22:13735113-13735401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 159
               

               
Conread position:
               
580-870
               

               
Cow position:
               
chr22:27322466-27322174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
228, 79
               

               
Conread position:
               
581-811
               

               
Cow position:
               
chr22:9171565-9171333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
581-827
               

               
Cow position:
               
chr22:24915997-24915747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
581-873
               

               
Cow position:
               
chr22:17224511-17224809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
583-709
               

               
Cow position:
               
chr22:24047456-24047584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
586-875
               

               
Cow position:
               
chr22:22553085-22553382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
588-748
               

               
Cow position:
               
chr22:8710222-8710385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
590-819
               

               
Cow position:
               
chr22:25846172-25846403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
590-875
               

               
Cow position:
               
chr22:9521288-9520999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
595-824
               

               
Cow position:
               
chr22:38981025-38980810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
213, 62
               

               
Conread position:
               
595-870
               

               
Cow position:
               
chr22:46567750-46568023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
596-875
               

               
Cow position:
               
chr22:3317262-3316975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
597-886
               

               
Cow position:
               
chr22:877654-877356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
598-870
               

               
Cow position:
               
chr22:13769612-13769332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
602-875
               

               
Cow position:
               
chr22:26659176-26658908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
602-875
               

               
Cow position:
               
chr22:37324683-37324399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
602-887
               

               
Cow position:
               
chr22:10633045-10632761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
224, 61
               

               
Conread position:
               
603-825
               

               
Cow position:
               
chr22:29185473-29185692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
603-875
               

               
Cow position:
               
chr22:23857181-23856902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
608-827
               

               
Cow position:
               
chr22:12967944-12968159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
193, 50
               

               
Conread position:
               
608-862
               

               
Cow position:
               
chr22:25387457-25387190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
608-875
               

               
Cow position:
               
chr22:24610965-24611227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
609-739
               

               
Cow position:
               
chr22:31309011-31308882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-766
               

               
Cow position:
               
chr22:6326571-6326414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
609-822
               

               
Cow position:
               
chr22:10553558-10553770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
609-825
               

               
Cow position:
               
chr22:26123023-26122809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
609-827
               

               
Cow position:
               
chr22:34104545-34104765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-839
               

               
Cow position:
               
chr22:1871223-1870990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
609-860
               

               
Cow position:
               
chr22:27431578-27431819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
609-866
               

               
Cow position:
               
chr22:21295598-21295862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
609-869
               

               
Cow position:
               
chr22:31154076-31153815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
609-870
               

               
Cow position:
               
chr22:6494288-6494029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
609-873
               

               
Cow position:
               
chr22:4017600-4017332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr22:1563126-1563397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr22:1591150-1590876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr22:2502953-2502688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr22:3950379-3950103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr22:16044289-16044568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr22:19173829-19173552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 166
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr22:34606718-34606436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr22:43119600-43119875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
609-876
               

               
Cow position:
               
chr22:10421158-10420883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
609-885
               

               
Cow position:
               
chr22:23176313-23176599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
609-887
               

               
Cow position:
               
chr22:3965313-3965025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
609-887
               

               
Cow position:
               
chr22:32895340-32895058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
609-888
               

               
Cow position:
               
chr22:21530232-21530510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
610-827
               

               
Cow position:
               
chr22:10286096-10285876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
612-767
               

               
Cow position:
               
chr22:23398280-23398435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
612-784
               

               
Cow position:
               
chr22:21235310-21235480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
612-814
               

               
Cow position:
               
chr22:1026014-1025810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
612-848
               

               
Cow position:
               
chr22:6936374-6936145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
196, 21
               

               
Conread position:
               
612-875
               

               
Cow position:
               
chr22:1279261-1279535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
613-871
               

               
Cow position:
               
chr22:17764499-17764237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
197, 54
               

               
Conread position:
               
613-875
               

               
Cow position:
               
chr22:4645888-4645626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
195, 20
               

               
Conread position:
               
613-875
               

               
Cow position:
               
chr22:30049441-30049716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
614-809
               

               
Cow position:
               
chr22:13878299-13878114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
614-832
               

               
Cow position:
               
chr22:10533713-10533499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
614-865
               

               
Cow position:
               
chr22:17294815-17295067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
614-873
               

               
Cow position:
               
chr22:25540121-25539846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr22:23403522-23403794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr22:26969908-26969635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr22:32188732-32188995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
614-884
               

               
Cow position:
               
chr22:2623400-2623674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
614-884
               

               
Cow position:
               
chr22:13841260-13840982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
614-887
               

               
Cow position:
               
chr22:2216932-2216664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
615-875
               

               
Cow position:
               
chr22:21502865-21502596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
617-744
               

               
Cow position:
               
chr22:22606344-22606217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
617-774
               

               
Cow position:
               
chr22:14381778-14381620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
617-825
               

               
Cow position:
               
chr22:26075040-26074834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
617-873
               

               
Cow position:
               
chr22:1265805-1266075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr22:14924613-14924879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr22:17814351-17814077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
617-875
               

               
Cow position:
               
chr22:34750790-34750531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
618-872
               

               
Cow position:
               
chr22:23750779-23751026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
618-874
               

               
Cow position:
               
chr22:35753185-35753448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
618-886
               

               
Cow position:
               
chr22:28665399-28665128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
619-790
               

               
Cow position:
               
chr22:11344624-11344454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
619-869
               

               
Cow position:
               
chr22:8481759-8481502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
619-870
               

               
Cow position:
               
chr22:28351552-28351793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
621-875
               

               
Cow position:
               
chr22:26141389-26141129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
622-827
               

               
Cow position:
               
chr22:2627694-2627485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
622-827
               

               
Cow position:
               
chr22:34712839-34712634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
622-875
               

               
Cow position:
               
chr22:31510264-31510515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
623-840
               

               
Cow position:
               
chr22:23121889-23122113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
623-863
               

               
Cow position:
               
chr22:21355032-21355273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
183, 10
               

               
Conread position:
               
623-887
               

               
Cow position:
               
chr22:24734208-24734470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
188, 49
               

               
Conread position:
               
624-878
               

               
Cow position:
               
chr22:45846253-45845996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
625-827
               

               
Cow position:
               
chr22:13222228-13222022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
625-827
               

               
Cow position:
               
chr22:18293657-18293851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
183, 33
               

               
Conread position:
               
627-827
               

               
Cow position:
               
chr22:24336636-24336437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
628-827
               

               
Cow position:
               
chr22:4011290-4011094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
630-777
               

               
Cow position:
               
chr22:23036267-23036123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
631-860
               

               
Cow position:
               
chr22:10669371-10669598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
631-873
               

               
Cow position:
               
chr22:7838695-7838449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
177, 77
               

               
Conread position:
               
631-875
               

               
Cow position:
               
chr22:9283496-9283745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
177, 37
               

               
Conread position:
               
633-875
               

               
Cow position:
               
chr22:26184061-26184309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
176, 30
               

               
Conread position:
               
635-813
               

               
Cow position:
               
chr22:28704282-28704110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
635-871
               

               
Cow position:
               
chr22:17125679-17125438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr22:846001-845755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr22:11458913-11458681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
168, 14
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr22:14638379-14638628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
635-876
               

               
Cow position:
               
chr22:10315174-10314927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
635-887
               

               
Cow position:
               
chr22:19775336-19775590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
164, 30
               

               
Conread position:
               
635-887
               

               
Cow position:
               
chr22:44180691-44180433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
174, 33
               

               
Conread position:
               
642-827
               

               
Cow position:
               
chr22:3544228-3544046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
644-875
               

               
Cow position:
               
chr22:22160815-22160577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
164, 23
               

               
Conread position:
               
652-878
               

               
Cow position:
               
chr22:16823181-16822953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
655-870
               

               
Cow position:
               
chr22:3241623-3241841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
658-886
               

               
Cow position:
               
chr22:14882038-14882266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
157, 52
               

               
Conread position:
               
659-866
               

               
Cow position:
               
chr22:30577594-30577385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
5, 153
               

               
Conread position:
               
661-887
               

               
Cow position:
               
chr22:31592782-31593020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
106, 5
               

               
Conread position:
               
663-827
               

               
Cow position:
               
chr22:24223143-24222989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
666-875
               

               
Cow position:
               
chr22:17992961-17993179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
142, 111
               

               
Conread position:
               
669-840
               

               
Cow position:
               
chr22:30964195-30964025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 91
               

               
Conread position:
               
669-875
               

               
Cow position:
               
chr22:3993677-3993465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
139, 97
               

               
Conread position:
               
669-876
               

               
Cow position:
               
chr22:912165-911950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
160, 128
               

               
Conread position:
               
670-873
               

               
Cow position:
               
chr22:11257682-11257880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
670-874
               

               
Cow position:
               
chr22:27835599-27835384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
670-875
               

               
Cow position:
               
chr22:34398390-34398605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 99
               

               
Conread position:
               
673-880
               

               
Cow position:
               
chr22:15760425-15760217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
675-875
               

               
Cow position:
               
chr22:1874754-1874546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
680-875
               

               
Cow position:
               
chr22:25629707-25629910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
681-887
               

               
Cow position:
               
chr22:10677936-10678143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
141, 36
               

               
Conread position:
               
682-877
               

               
Cow position:
               
chr22:11745850-11746052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 13
               

               
Conread position:
               
703-875
               

               
Cow position:
               
chr22:10585670-10585848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
703-875
               

               
Cow position:
               
chr22:41270968-41271146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 75
               
Show alignments to all cow chromosomes.