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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8017D19.3
        

               
Conread position:
               
487-870
               

               
Cow position:
               
chr29:11562877-11562475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
503-870
               

               
Cow position:
               
chr29:31674873-31674490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
16, 175
               

               
Conread position:
               
510-782
               

               
Cow position:
               
chr29:4070851-4070583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 160
               

               
Conread position:
               
518-734
               

               
Cow position:
               
chr29:19420398-19420610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 6
               

               
Conread position:
               
519-876
               

               
Cow position:
               
chr29:32733525-32733172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
520-807
               

               
Cow position:
               
chr29:30366831-30367124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
521-733
               

               
Cow position:
               
chr29:684959-685169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 30
               

               
Conread position:
               
522-755
               

               
Cow position:
               
chr29:9378851-9378619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
522-807
               

               
Cow position:
               
chr29:32656655-32656365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
90, 148
               

               
Conread position:
               
525-875
               

               
Cow position:
               
chr29:2744052-2744417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
12, 143
               

               
Conread position:
               
525-887
               

               
Cow position:
               
chr29:28979300-28979642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
528-875
               

               
Cow position:
               
chr29:36531077-36530722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
530-693
               

               
Cow position:
               
chr29:11685380-11685211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
530-718
               

               
Cow position:
               
chr29:35189819-35189626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
530-748
               

               
Cow position:
               
chr29:19363919-19363700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
530-823
               

               
Cow position:
               
chr29:4492643-4492359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
113, 129
               

               
Conread position:
               
530-827
               

               
Cow position:
               
chr29:18878270-18878584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
530-863
               

               
Cow position:
               
chr29:26259687-26259343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 87
               

               
Conread position:
               
530-870
               

               
Cow position:
               
chr29:22028753-22029079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
530-870
               

               
Cow position:
               
chr29:36220753-36220387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
530-874
               

               
Cow position:
               
chr29:21706188-21706534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr29:29057388-29057036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr29:35084013-35084368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
530-875
               

               
Cow position:
               
chr29:36210359-36210017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
530-876
               

               
Cow position:
               
chr29:16272954-16272579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
530-887
               

               
Cow position:
               
chr29:23845051-23844679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 248
               

               
Conread position:
               
531-734
               

               
Cow position:
               
chr29:19187236-19187029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 140
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr29:31982032-31981801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
531-784
               

               
Cow position:
               
chr29:44991215-44991470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
531-819
               

               
Cow position:
               
chr29:30227071-30227353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
531-825
               

               
Cow position:
               
chr29:32894467-32894182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
103, 77
               

               
Conread position:
               
531-827
               

               
Cow position:
               
chr29:23698177-23697891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
531-887
               

               
Cow position:
               
chr29:10018778-10018418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
278, 79
               

               
Conread position:
               
532-693
               

               
Cow position:
               
chr29:22776285-22776123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 139
               

               
Conread position:
               
532-729
               

               
Cow position:
               
chr29:14746987-14746788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
88, 137
               

               
Conread position:
               
532-731
               

               
Cow position:
               
chr29:14375670-14375875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
532-741
               

               
Cow position:
               
chr29:25793350-25793142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
532-827
               

               
Cow position:
               
chr29:7310872-7310600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr29:16609959-16609596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr29:29769143-29769496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr29:34297362-34297710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
91, 105
               

               
Conread position:
               
532-875
               

               
Cow position:
               
chr29:37618517-37618161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 141
               

               
Conread position:
               
532-886
               

               
Cow position:
               
chr29:1933361-1933714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
533-728
               

               
Cow position:
               
chr29:16200268-16200469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 140
               

               
Conread position:
               
533-733
               

               
Cow position:
               
chr29:26211261-26211056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 138
               

               
Conread position:
               
533-739
               

               
Cow position:
               
chr29:22576970-22577180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 139
               

               
Conread position:
               
533-766
               

               
Cow position:
               
chr29:44684305-44684074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
91, 137
               

               
Conread position:
               
533-804
               

               
Cow position:
               
chr29:42630325-42630058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
81, 138
               

               
Conread position:
               
533-827
               

               
Cow position:
               
chr29:41531059-41530759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 133
               

               
Conread position:
               
533-849
               

               
Cow position:
               
chr29:23874670-23874343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
533-875
               

               
Cow position:
               
chr29:16196063-16195704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
92, 204
               

               
Conread position:
               
533-875
               

               
Cow position:
               
chr29:32799496-32799857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
533-886
               

               
Cow position:
               
chr29:35292294-35291933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 92
               

               
Conread position:
               
534-744
               

               
Cow position:
               
chr29:19176709-19176920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
534-827
               

               
Cow position:
               
chr29:29923370-29923663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
534-870
               

               
Cow position:
               
chr29:35458562-35458915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 140
               

               
Conread position:
               
534-875
               

               
Cow position:
               
chr29:29475046-29475397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 226
               

               
Conread position:
               
535-691
               

               
Cow position:
               
chr29:36546576-36546736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
535-704
               

               
Cow position:
               
chr29:23678907-23678742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
104, 90
               

               
Conread position:
               
535-707
               

               
Cow position:
               
chr29:2219593-2219417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 136
               

               
Conread position:
               
535-710
               

               
Cow position:
               
chr29:936408-936234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
535-710
               

               
Cow position:
               
chr29:41112682-41112854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
535-715
               

               
Cow position:
               
chr29:24660883-24660710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 81
               

               
Conread position:
               
535-733
               

               
Cow position:
               
chr29:28420963-28420760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 131
               

               
Conread position:
               
535-733
               

               
Cow position:
               
chr29:38754732-38754935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
535-744
               

               
Cow position:
               
chr29:29308377-29308578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
535-777
               

               
Cow position:
               
chr29:39038062-39038309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 141
               

               
Conread position:
               
535-805
               

               
Cow position:
               
chr29:23825868-23825604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
152, 80
               

               
Conread position:
               
535-821
               

               
Cow position:
               
chr29:8292705-8292996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 152
               

               
Conread position:
               
535-824
               

               
Cow position:
               
chr29:16290929-16290645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr29:1008026-1007728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr29:1615132-1614837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr29:3685315-3685600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr29:4121061-4120760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr29:18021496-18021768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
266, 74
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr29:27858994-27858706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
535-862
               

               
Cow position:
               
chr29:6337857-6337528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
535-869
               

               
Cow position:
               
chr29:34773543-34773873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
274, 69
               

               
Conread position:
               
535-870
               

               
Cow position:
               
chr29:27668448-27668795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
90, 246
               

               
Conread position:
               
535-875
               

               
Cow position:
               
chr29:24624448-24624106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr29:17462573-17462944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 246
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr29:21196446-21196813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
536-804
               

               
Cow position:
               
chr29:5994884-5995164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
536-865
               

               
Cow position:
               
chr29:28587649-28587322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
227, 119
               

               
Conread position:
               
536-870
               

               
Cow position:
               
chr29:28196816-28197146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
292, 5
               

               
Conread position:
               
537-736
               

               
Cow position:
               
chr29:27683761-27683951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
537-819
               

               
Cow position:
               
chr29:22518917-22519210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
537-826
               

               
Cow position:
               
chr29:29183926-29183637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
537-886
               

               
Cow position:
               
chr29:28195329-28195670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
271, 73
               

               
Conread position:
               
537-887
               

               
Cow position:
               
chr29:22068538-22068910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
538-744
               

               
Cow position:
               
chr29:26540337-26540547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 133
               

               
Conread position:
               
540-694
               

               
Cow position:
               
chr29:29296589-29296437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
540-817
               

               
Cow position:
               
chr29:36952111-36952378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
268, 93
               

               
Conread position:
               
540-886
               

               
Cow position:
               
chr29:38581193-38580822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 173
               

               
Conread position:
               
541-675
               

               
Cow position:
               
chr29:659481-659341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
541-693
               

               
Cow position:
               
chr29:40112579-40112426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
541-713
               

               
Cow position:
               
chr29:42798156-42797980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
541-749
               

               
Cow position:
               
chr29:22734906-22735117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
541-807
               

               
Cow position:
               
chr29:18449938-18450201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 122
               

               
Conread position:
               
541-807
               

               
Cow position:
               
chr29:20167623-20167356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
541-827
               

               
Cow position:
               
chr29:19428850-19428571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
541-866
               

               
Cow position:
               
chr29:26779076-26778752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr29:1022494-1022148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
541-875
               

               
Cow position:
               
chr29:19762463-19762131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
541-887
               

               
Cow position:
               
chr29:17297338-17296973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
541-887
               

               
Cow position:
               
chr29:43099549-43099904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 129
               

               
Conread position:
               
542-851
               

               
Cow position:
               
chr29:19250542-19250235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
99, 154
               

               
Conread position:
               
542-886
               

               
Cow position:
               
chr29:11916020-11915663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 124
               

               
Conread position:
               
543-874
               

               
Cow position:
               
chr29:12680356-12680014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
550-642
               

               
Cow position:
               
chr29:35485768-35485677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
550-724
               

               
Cow position:
               
chr29:26602391-26602212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr29:4648021-4648200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
550-739
               

               
Cow position:
               
chr29:26539422-26539233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
550-743
               

               
Cow position:
               
chr29:4441014-4441211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
550-758
               

               
Cow position:
               
chr29:24187872-24188086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
550-767
               

               
Cow position:
               
chr29:3293134-3292918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
550-773
               

               
Cow position:
               
chr29:22720456-22720689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
550-773
               

               
Cow position:
               
chr29:38858021-38858249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
550-782
               

               
Cow position:
               
chr29:8163636-8163872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 123
               

               
Conread position:
               
550-826
               

               
Cow position:
               
chr29:5408951-5409227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
550-826
               

               
Cow position:
               
chr29:23812857-23813123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr29:5046844-5046564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
550-827
               

               
Cow position:
               
chr29:5520293-5520593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 126
               

               
Conread position:
               
550-840
               

               
Cow position:
               
chr29:15947360-15947072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
62, 122
               

               
Conread position:
               
550-849
               

               
Cow position:
               
chr29:31786865-31786565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
550-863
               

               
Cow position:
               
chr29:11667139-11666828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
550-869
               

               
Cow position:
               
chr29:22690418-22690084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
58, 220
               

               
Conread position:
               
550-870
               

               
Cow position:
               
chr29:2056251-2055917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
550-870
               

               
Cow position:
               
chr29:30441130-30440785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
550-875
               

               
Cow position:
               
chr29:7955797-7956129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
550-885
               

               
Cow position:
               
chr29:14501786-14501440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr29:1395763-1395437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
213, 30
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr29:35677350-35677707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 127
               

               
Conread position:
               
551-706
               

               
Cow position:
               
chr29:41223351-41223196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
551-875
               

               
Cow position:
               
chr29:25737229-25737563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
551-886
               

               
Cow position:
               
chr29:18462364-18462711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 116
               

               
Conread position:
               
552-653
               

               
Cow position:
               
chr29:2352685-2352581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
552-654
               

               
Cow position:
               
chr29:31835457-31835352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
552-663
               

               
Cow position:
               
chr29:570655-570768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
552-683
               

               
Cow position:
               
chr29:38010633-38010493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
552-684
               

               
Cow position:
               
chr29:25669272-25669147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
552-705
               

               
Cow position:
               
chr29:33143167-33143322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
552-710
               

               
Cow position:
               
chr29:39639029-39638871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
552-710
               

               
Cow position:
               
chr29:40763507-40763667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
552-718
               

               
Cow position:
               
chr29:17282250-17282087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
552-719
               

               
Cow position:
               
chr29:5064953-5064793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
552-719
               

               
Cow position:
               
chr29:37293216-37293055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
552-723
               

               
Cow position:
               
chr29:9622519-9622678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
552-732
               

               
Cow position:
               
chr29:8634841-8634659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
552-734
               

               
Cow position:
               
chr29:629726-629541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
552-734
               

               
Cow position:
               
chr29:14577046-14576862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
552-735
               

               
Cow position:
               
chr29:36697946-36697759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
552-737
               

               
Cow position:
               
chr29:17436936-17436751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
552-740
               

               
Cow position:
               
chr29:43088495-43088308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
552-741
               

               
Cow position:
               
chr29:15798140-15797948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
552-747
               

               
Cow position:
               
chr29:22729754-22729558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
552-757
               

               
Cow position:
               
chr29:31651591-31651391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
144, 72
               

               
Conread position:
               
552-758
               

               
Cow position:
               
chr29:32655905-32656113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
552-765
               

               
Cow position:
               
chr29:16279166-16278960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
552-766
               

               
Cow position:
               
chr29:31934565-31934350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
552-767
               

               
Cow position:
               
chr29:8686498-8686300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
552-779
               

               
Cow position:
               
chr29:36357317-36357087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
552-797
               

               
Cow position:
               
chr29:22166898-22167138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
552-804
               

               
Cow position:
               
chr29:1011404-1011637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
65, 114
               

               
Conread position:
               
552-807
               

               
Cow position:
               
chr29:44139056-44139312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
552-810
               

               
Cow position:
               
chr29:38979891-38980140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
552-824
               

               
Cow position:
               
chr29:20770533-20770258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
552-825
               

               
Cow position:
               
chr29:5063332-5063061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
552-826
               

               
Cow position:
               
chr29:40583974-40583706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
112, 22
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr29:13028639-13028349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr29:28994045-28993772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr29:40117754-40117480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
552-870
               

               
Cow position:
               
chr29:22613610-22613286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
252, 25
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:1325635-1325296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:4874701-4875038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
158, 67
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:5893035-5892705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:10058354-10058681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:10839128-10838805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:17110142-17109823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:19949494-19949168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
71, 117
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:22714521-22714869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 196
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:24952876-24952543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 88
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:25092293-25091967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 117
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:26275790-26275472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:31929175-31928836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
552-875
               

               
Cow position:
               
chr29:35501476-35501796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 46
               

               
Conread position:
               
552-877
               

               
Cow position:
               
chr29:22895897-22895579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
209, 56
               

               
Conread position:
               
552-884
               

               
Cow position:
               
chr29:19756626-19756293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
552-886
               

               
Cow position:
               
chr29:21443152-21443501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
553-726
               

               
Cow position:
               
chr29:32215892-32215720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
553-732
               

               
Cow position:
               
chr29:4053156-4053335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 114
               

               
Conread position:
               
553-737
               

               
Cow position:
               
chr29:40350893-40351075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 113
               

               
Conread position:
               
553-742
               

               
Cow position:
               
chr29:12890864-12890680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
553-762
               

               
Cow position:
               
chr29:4423262-4423464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
553-825
               

               
Cow position:
               
chr29:12625810-12626065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
253, 59
               

               
Conread position:
               
553-827
               

               
Cow position:
               
chr29:8862311-8862566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
255, 57
               

               
Conread position:
               
553-887
               

               
Cow position:
               
chr29:16309909-16309583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
190, 24
               

               
Conread position:
               
553-887
               

               
Cow position:
               
chr29:16657879-16657532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 107
               

               
Conread position:
               
554-671
               

               
Cow position:
               
chr29:11887448-11887332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
554-707
               

               
Cow position:
               
chr29:30206692-30206839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
554-711
               

               
Cow position:
               
chr29:10191858-10192013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
554-732
               

               
Cow position:
               
chr29:23913210-23913388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
554-744
               

               
Cow position:
               
chr29:19125517-19125315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 125
               

               
Conread position:
               
554-748
               

               
Cow position:
               
chr29:36781123-36781315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
554-752
               

               
Cow position:
               
chr29:21592886-21592692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
554-762
               

               
Cow position:
               
chr29:9310790-9310575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
554-771
               

               
Cow position:
               
chr29:396589-396379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
554-772
               

               
Cow position:
               
chr29:40791484-40791275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
554-775
               

               
Cow position:
               
chr29:17804717-17804502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
554-823
               

               
Cow position:
               
chr29:5789202-5788923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
205, 49
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr29:732797-732529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
554-844
               

               
Cow position:
               
chr29:2262794-2263104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 158
               

               
Conread position:
               
554-859
               

               
Cow position:
               
chr29:34358792-34359109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
554-866
               

               
Cow position:
               
chr29:10653509-10653210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
269, 79
               

               
Conread position:
               
554-870
               

               
Cow position:
               
chr29:17222603-17222272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
554-873
               

               
Cow position:
               
chr29:22162077-22162396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
254, 20
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr29:8669541-8669221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 5
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr29:39111137-39111460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 62
               

               
Conread position:
               
554-875
               

               
Cow position:
               
chr29:42363832-42364159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
554-877
               

               
Cow position:
               
chr29:44008620-44008929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
254, 58
               

               
Conread position:
               
555-711
               

               
Cow position:
               
chr29:22652505-22652349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 106
               

               
Conread position:
               
555-747
               

               
Cow position:
               
chr29:7290955-7290765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
555-773
               

               
Cow position:
               
chr29:32197880-32197665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
555-774
               

               
Cow position:
               
chr29:29324234-29324457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 152
               

               
Conread position:
               
555-827
               

               
Cow position:
               
chr29:26017314-26017590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
64, 213
               

               
Conread position:
               
555-839
               

               
Cow position:
               
chr29:7624351-7624075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
555-873
               

               
Cow position:
               
chr29:34359640-34359945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
555-886
               

               
Cow position:
               
chr29:4085482-4085162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
253, 51
               

               
Conread position:
               
556-866
               

               
Cow position:
               
chr29:31944053-31943744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
56, 118
               

               
Conread position:
               
556-873
               

               
Cow position:
               
chr29:4520517-4520192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
556-887
               

               
Cow position:
               
chr29:9709878-9709538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 112
               

               
Conread position:
               
557-800
               

               
Cow position:
               
chr29:43544421-43544661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
557-808
               

               
Cow position:
               
chr29:30548957-30548706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
557-812
               

               
Cow position:
               
chr29:36632676-36632933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
66, 114
               

               
Conread position:
               
557-871
               

               
Cow position:
               
chr29:11647270-11646954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
557-875
               

               
Cow position:
               
chr29:12783771-12784102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
81, 155
               

               
Conread position:
               
557-875
               

               
Cow position:
               
chr29:31926133-31926435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
251, 52
               

               
Conread position:
               
558-817
               

               
Cow position:
               
chr29:43183135-43183386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
558-819
               

               
Cow position:
               
chr29:18556850-18556585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
560-764
               

               
Cow position:
               
chr29:22723777-22723574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
560-812
               

               
Cow position:
               
chr29:23825031-23825292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
560-886
               

               
Cow position:
               
chr29:44988623-44988935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
262, 51
               

               
Conread position:
               
560-887
               

               
Cow position:
               
chr29:17154943-17154609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 67
               

               
Conread position:
               
563-710
               

               
Cow position:
               
chr29:28257320-28257168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
563-875
               

               
Cow position:
               
chr29:38582148-38581830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 110
               

               
Conread position:
               
563-875
               

               
Cow position:
               
chr29:44236620-44236323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
238, 51
               

               
Conread position:
               
564-732
               

               
Cow position:
               
chr29:11116486-11116656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
564-877
               

               
Cow position:
               
chr29:356479-356179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
244, 46
               

               
Conread position:
               
565-816
               

               
Cow position:
               
chr29:40633829-40633573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
565-866
               

               
Cow position:
               
chr29:27826681-27826390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
238, 46
               

               
Conread position:
               
568-727
               

               
Cow position:
               
chr29:14227728-14227569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
569-817
               

               
Cow position:
               
chr29:38347855-38348107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
572-709
               

               
Cow position:
               
chr29:34688741-34688878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
572-875
               

               
Cow position:
               
chr29:86835-87163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
40, 174
               

               
Conread position:
               
572-887
               

               
Cow position:
               
chr29:3100096-3100414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 216
               

               
Conread position:
               
573-873
               

               
Cow position:
               
chr29:22778010-22778321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
574-875
               

               
Cow position:
               
chr29:12025309-12025616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
574-875
               

               
Cow position:
               
chr29:13639197-13639515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
575-745
               

               
Cow position:
               
chr29:22032475-22032650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
576-808
               

               
Cow position:
               
chr29:32176833-32176612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
577-875
               

               
Cow position:
               
chr29:9718611-9718914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
586-827
               

               
Cow position:
               
chr29:28775308-28775545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
587-886
               

               
Cow position:
               
chr29:109834-109552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
593-875
               

               
Cow position:
               
chr29:7966393-7966103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
597-866
               

               
Cow position:
               
chr29:1557073-1556796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
598-827
               

               
Cow position:
               
chr29:24578994-24578770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
202, 34
               

               
Conread position:
               
599-825
               

               
Cow position:
               
chr29:13373442-13373213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
603-878
               

               
Cow position:
               
chr29:19821410-19821139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
206, 28
               

               
Conread position:
               
604-875
               

               
Cow position:
               
chr29:463520-463799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
606-887
               

               
Cow position:
               
chr29:40959717-40960004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
608-887
               

               
Cow position:
               
chr29:6293353-6293634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
609-730
               

               
Cow position:
               
chr29:17022278-17022157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-807
               

               
Cow position:
               
chr29:7103686-7103489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
609-870
               

               
Cow position:
               
chr29:28166094-28166353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
609-874
               

               
Cow position:
               
chr29:749783-750051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
609-874
               

               
Cow position:
               
chr29:8926333-8926598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
609-874
               

               
Cow position:
               
chr29:11397799-11398067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr29:6844504-6844776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr29:23243750-23244025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
609-875
               

               
Cow position:
               
chr29:45005503-45005768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
609-887
               

               
Cow position:
               
chr29:17409467-17409174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 164
               

               
Conread position:
               
612-815
               

               
Cow position:
               
chr29:5210614-5210412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
612-832
               

               
Cow position:
               
chr29:13867086-13867306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
613-875
               

               
Cow position:
               
chr29:39329479-39329739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
614-827
               

               
Cow position:
               
chr29:847519-847729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
614-866
               

               
Cow position:
               
chr29:40853053-40852800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
614-870
               

               
Cow position:
               
chr29:39567801-39567547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
195, 12
               

               
Conread position:
               
614-873
               

               
Cow position:
               
chr29:6286038-6286302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
614-875
               

               
Cow position:
               
chr29:29314537-29314800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
194, 24
               

               
Conread position:
               
615-875
               

               
Cow position:
               
chr29:26416471-26416215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
617-809
               

               
Cow position:
               
chr29:32926224-32926028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
617-887
               

               
Cow position:
               
chr29:22175801-22175529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
618-875
               

               
Cow position:
               
chr29:4480054-4480317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
619-860
               

               
Cow position:
               
chr29:29176499-29176745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
619-870
               

               
Cow position:
               
chr29:37599102-37599348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
208, 21
               

               
Conread position:
               
619-875
               

               
Cow position:
               
chr29:32210953-32211201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
620-827
               

               
Cow position:
               
chr29:43251048-43251256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
620-862
               

               
Cow position:
               
chr29:25333344-25333593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
620-874
               

               
Cow position:
               
chr29:40298903-40299156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
621-827
               

               
Cow position:
               
chr29:4444832-4444626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
621-871
               

               
Cow position:
               
chr29:9912290-9912031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
621-874
               

               
Cow position:
               
chr29:10156193-10156449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
622-875
               

               
Cow position:
               
chr29:6926120-6925867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
622-876
               

               
Cow position:
               
chr29:27589038-27588777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
623-887
               

               
Cow position:
               
chr29:36217226-36216959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
624-876
               

               
Cow position:
               
chr29:20903177-20903430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
625-869
               

               
Cow position:
               
chr29:27330001-27329753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
183, 23
               

               
Conread position:
               
626-887
               

               
Cow position:
               
chr29:10235027-10235288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
180, 8
               

               
Conread position:
               
626-888
               

               
Cow position:
               
chr29:15940526-15940790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
179, 17
               

               
Conread position:
               
627-819
               

               
Cow position:
               
chr29:18012665-18012474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
627-875
               

               
Cow position:
               
chr29:28868750-28868491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
632-827
               

               
Cow position:
               
chr29:693909-694089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
632-827
               

               
Cow position:
               
chr29:22721485-22721285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
633-866
               

               
Cow position:
               
chr29:26615616-26615858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
175, 144
               

               
Conread position:
               
635-827
               

               
Cow position:
               
chr29:6015225-6015034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
635-827
               

               
Cow position:
               
chr29:27873700-27873516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
164, 32
               

               
Conread position:
               
635-827
               

               
Cow position:
               
chr29:32290708-32290520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
173, 23
               

               
Conread position:
               
635-875
               

               
Cow position:
               
chr29:2984989-2984739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
173, 32
               

               
Conread position:
               
636-875
               

               
Cow position:
               
chr29:5186395-5186640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
140, 31
               

               
Conread position:
               
637-875
               

               
Cow position:
               
chr29:23983858-23984104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
660-875
               

               
Cow position:
               
chr29:9139497-9139264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 5
               

               
Conread position:
               
660-886
               

               
Cow position:
               
chr29:40166320-40166088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
661-887
               

               
Cow position:
               
chr29:17668562-17668341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
162, 8
               

               
Conread position:
               
669-874
               

               
Cow position:
               
chr29:44682036-44682241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 80
               

               
Conread position:
               
669-887
               

               
Cow position:
               
chr29:868843-868614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
144, 90
               

               
Conread position:
               
670-877
               

               
Cow position:
               
chr29:37960909-37961125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
671-826
               

               
Cow position:
               
chr29:2071505-2071660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
671-867
               

               
Cow position:
               
chr29:36183347-36183144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
138, 89
               

               
Conread position:
               
673-829
               

               
Cow position:
               
chr29:13487015-13486859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
135, 89
               

               
Conread position:
               
673-875
               

               
Cow position:
               
chr29:17048-17249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 7
               

               
Conread position:
               
682-870
               

               
Cow position:
               
chr29:17301589-17301389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
686-867
               

               
Cow position:
               
chr29:11135845-11136028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
687-874
               

               
Cow position:
               
chr29:4051937-4052128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
709-870
               

               
Cow position:
               
chr29:39643204-39643035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
721-870
               

               
Cow position:
               
chr29:4328434-4328284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
774-874
               

               
Cow position:
               
chr29:5064444-5064343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 51
               
Show alignments to all cow chromosomes.