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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8018L10.3
        

               
Conread position:
               
216-696
               

               
Cow position:
               
chr20:16189524-16189044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
455, 442
               

               
Conread position:
               
309-696
               

               
Cow position:
               
chr20:9433025-9433402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
310-543
               

               
Cow position:
               
chr20:15068485-15068729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 200
               

               
Conread position:
               
310-696
               

               
Cow position:
               
chr20:38956423-38956037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
311-677
               

               
Cow position:
               
chr20:2654897-2655271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
313-501
               

               
Cow position:
               
chr20:14877716-14877902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-554
               

               
Cow position:
               
chr20:1580865-1580624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-682
               

               
Cow position:
               
chr20:14583258-14582883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-685
               

               
Cow position:
               
chr20:10062291-10061928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
248, 9
               

               
Conread position:
               
313-685
               

               
Cow position:
               
chr20:13771320-13771698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
165, 205
               

               
Conread position:
               
313-690
               

               
Cow position:
               
chr20:7875230-7874840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
313-693
               

               
Cow position:
               
chr20:17479978-17479581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-693
               

               
Cow position:
               
chr20:21807151-21806768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
263, 14
               

               
Conread position:
               
313-696
               

               
Cow position:
               
chr20:5958487-5958104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-696
               

               
Cow position:
               
chr20:6258637-6258263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
314-609
               

               
Cow position:
               
chr20:4668364-4668656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
315-678
               

               
Cow position:
               
chr20:11389956-11389601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 130
               

               
Conread position:
               
317-595
               

               
Cow position:
               
chr20:7994880-7994603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
317-661
               

               
Cow position:
               
chr20:5181311-5181670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
317-696
               

               
Cow position:
               
chr20:37271931-37272300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 17
               

               
Conread position:
               
318-682
               

               
Cow position:
               
chr20:4788804-4788450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
318-696
               

               
Cow position:
               
chr20:28759328-28759693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
319-512
               

               
Cow position:
               
chr20:25018918-25018721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
319-664
               

               
Cow position:
               
chr20:3451952-3452296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
236, 55
               

               
Conread position:
               
320-596
               

               
Cow position:
               
chr20:15235263-15235543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
320-661
               

               
Cow position:
               
chr20:20779117-20778778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 209
               

               
Conread position:
               
320-680
               

               
Cow position:
               
chr20:32152936-32153289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
322-488
               

               
Cow position:
               
chr20:11720366-11720535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
322-588
               

               
Cow position:
               
chr20:28100148-28099880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
322-606
               

               
Cow position:
               
chr20:35972958-35972671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
322-617
               

               
Cow position:
               
chr20:10885526-10885234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
322-663
               

               
Cow position:
               
chr20:15746623-15746967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
322-682
               

               
Cow position:
               
chr20:24534138-24534513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 355
               

               
Conread position:
               
322-696
               

               
Cow position:
               
chr20:12321059-12321433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
322-696
               

               
Cow position:
               
chr20:18490613-18490987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
322-696
               

               
Cow position:
               
chr20:22274444-22274068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 338
               

               
Conread position:
               
323-454
               

               
Cow position:
               
chr20:7592821-7592688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
323-456
               

               
Cow position:
               
chr20:7568335-7568200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
323-468
               

               
Cow position:
               
chr20:7597196-7597055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
323-474
               

               
Cow position:
               
chr20:15074331-15074482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
323-475
               

               
Cow position:
               
chr20:6550332-6550178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-483
               

               
Cow position:
               
chr20:3034557-3034720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-487
               

               
Cow position:
               
chr20:2881183-2881016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
323-487
               

               
Cow position:
               
chr20:28725425-28725590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
323-494
               

               
Cow position:
               
chr20:39375500-39375327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-496
               

               
Cow position:
               
chr20:20966518-20966698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
323-502
               

               
Cow position:
               
chr20:3501490-3501668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
323-507
               

               
Cow position:
               
chr20:9223518-9223703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
323-509
               

               
Cow position:
               
chr20:8279910-8279729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr20:4579376-4579187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-513
               

               
Cow position:
               
chr20:9339681-9339873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-516
               

               
Cow position:
               
chr20:18321904-18321713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
323-526
               

               
Cow position:
               
chr20:15240380-15240174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-527
               

               
Cow position:
               
chr20:12333334-12333538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
323-529
               

               
Cow position:
               
chr20:12826813-12826600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-532
               

               
Cow position:
               
chr20:22659193-22658983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
323-532
               

               
Cow position:
               
chr20:28560228-28560020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
323-537
               

               
Cow position:
               
chr20:27152255-27152471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-543
               

               
Cow position:
               
chr20:16515989-16516212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
323-566
               

               
Cow position:
               
chr20:22221943-22221698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
12, 202
               

               
Conread position:
               
323-571
               

               
Cow position:
               
chr20:869152-868899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-590
               

               
Cow position:
               
chr20:22064084-22063814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-590
               

               
Cow position:
               
chr20:41474652-41474383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-608
               

               
Cow position:
               
chr20:22185356-22185056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-614
               

               
Cow position:
               
chr20:28165501-28165795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-624
               

               
Cow position:
               
chr20:23465988-23465683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
323-625
               

               
Cow position:
               
chr20:24507408-24507099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
323-630
               

               
Cow position:
               
chr20:6477172-6477471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
323-646
               

               
Cow position:
               
chr20:22006882-22007206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
323-655
               

               
Cow position:
               
chr20:3405552-3405218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-655
               

               
Cow position:
               
chr20:4911524-4911848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
323-660
               

               
Cow position:
               
chr20:12034293-12033952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-662
               

               
Cow position:
               
chr20:12421211-12420872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 168
               

               
Conread position:
               
323-663
               

               
Cow position:
               
chr20:28113645-28113995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
323-666
               

               
Cow position:
               
chr20:40588248-40588592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 325
               

               
Conread position:
               
323-669
               

               
Cow position:
               
chr20:10338090-10338433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
323-670
               

               
Cow position:
               
chr20:10760059-10759714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
323-670
               

               
Cow position:
               
chr20:14866724-14866374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
323-670
               

               
Cow position:
               
chr20:28443683-28443338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 10
               

               
Conread position:
               
323-674
               

               
Cow position:
               
chr20:3182294-3181949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 194
               

               
Conread position:
               
323-678
               

               
Cow position:
               
chr20:34597693-34597334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
323-680
               

               
Cow position:
               
chr20:13464930-13465284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
323-680
               

               
Cow position:
               
chr20:14572947-14572596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 218
               

               
Conread position:
               
323-682
               

               
Cow position:
               
chr20:14760288-14759924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
323-682
               

               
Cow position:
               
chr20:29844466-29844833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
323-683
               

               
Cow position:
               
chr20:746383-746745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
323-688
               

               
Cow position:
               
chr20:10919889-10919523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
323-690
               

               
Cow position:
               
chr20:16449133-16449492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
323-690
               

               
Cow position:
               
chr20:18168806-18169175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
323-690
               

               
Cow position:
               
chr20:24903190-24902822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 211
               

               
Conread position:
               
323-690
               

               
Cow position:
               
chr20:32164055-32163687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
323-692
               

               
Cow position:
               
chr20:13574897-13574511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr20:6239219-6238848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr20:7131782-7132147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr20:12567661-12567289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 158
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr20:13766548-13766922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 342
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr20:27877149-27877523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 169
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr20:29370754-29370379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr20:34968667-34969040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:326188-326560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 319
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:754107-754482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:1024587-1024212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:2015976-2015600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:2819005-2819360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:4945819-4945445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:7807139-7806762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 343
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:8112238-8112614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:8870658-8870284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:9411011-9411381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 218
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:10913910-10913534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 345
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:11453935-11453554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 348
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:11516373-11516007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 11
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:12176824-12176448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:12434734-12434368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:13493162-13493538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:13505916-13505541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:13619128-13618753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:14806314-14806686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:14877959-14878336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 339
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:15089707-15089337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 206
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:15117472-15117847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 158
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:15295683-15296062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:16407109-16407475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 235
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:18091946-18091573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:18162452-18162827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:18223150-18222778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:18413291-18413657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:18609164-18609530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 86
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:18651275-18651649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:19845427-19845803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:20236231-20236589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 175
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:20438368-20437994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 169
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:21018990-21019365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 171
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:22209287-22209662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 342
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:23802816-23803191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 265
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:24399200-24398832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 160
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:25658363-25657989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 169
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:25844642-25844267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 265
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:26052687-26052313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 261
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:26826196-26825827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:27339502-27339867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:28246756-28246381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:28324144-28324516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:29602258-29601898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 271
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:29784140-29784515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:30384579-30384206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 317
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:30689538-30689912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:30736977-30736598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 341
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:30908625-30909000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:31261163-31261533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 259
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:31504999-31505373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 293
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:33349375-33349006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:34458608-34458233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:34900246-34900623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:35036600-35036227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:35094189-35094563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:35145437-35145807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:36424147-36424522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:37154300-37153926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:38001143-38001519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:38028575-38028196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 349
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:39391476-39391101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:40058169-40058554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 339
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:40423668-40423290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr20:40781405-40781773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
324-617
               

               
Cow position:
               
chr20:13653678-13653388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
324-682
               

               
Cow position:
               
chr20:21324533-21324898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 348
               

               
Conread position:
               
324-684
               

               
Cow position:
               
chr20:9509503-9509141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 341
               

               
Conread position:
               
324-695
               

               
Cow position:
               
chr20:31846154-31845782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
324-696
               

               
Cow position:
               
chr20:7757200-7756829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 168
               

               
Conread position:
               
324-696
               

               
Cow position:
               
chr20:8970242-8969868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
324-696
               

               
Cow position:
               
chr20:34202075-34202447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 140
               

               
Conread position:
               
324-696
               

               
Cow position:
               
chr20:35970371-35970741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 163
               

               
Conread position:
               
325-696
               

               
Cow position:
               
chr20:13048993-13048618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 183
               

               
Conread position:
               
327-471
               

               
Cow position:
               
chr20:12241445-12241299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
327-680
               

               
Cow position:
               
chr20:20898640-20898986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 0
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr20:8482773-8482406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 115
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr20:9993954-9994322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 6
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr20:10468503-10468871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 283
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr20:19146298-19146670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 185
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr20:20731913-20732289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr20:31076970-31077335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
328-474
               

               
Cow position:
               
chr20:22049040-22049185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-495
               

               
Cow position:
               
chr20:24388454-24388288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-520
               

               
Cow position:
               
chr20:5086651-5086842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-531
               

               
Cow position:
               
chr20:19046433-19046231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-554
               

               
Cow position:
               
chr20:15539629-15539405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-554
               

               
Cow position:
               
chr20:24620874-24621099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-589
               

               
Cow position:
               
chr20:7081142-7080882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-592
               

               
Cow position:
               
chr20:32451681-32451418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-693
               

               
Cow position:
               
chr20:23849734-23850081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:1761468-1761834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:5503067-5502700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:8247316-8246949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:8446086-8446453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:10099797-10100164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:11330737-11330369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:13303625-13303258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:16558858-16558507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:17863798-17864165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:20764587-20764954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:22060504-22060137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:23871387-23871015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 61
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:25122563-25122196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:26737776-26737409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:29284934-29284568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:33021349-33021716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:33304054-33303687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:35073056-35073422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:35169718-35170083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:36310829-36310462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:36854415-36854782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:39270066-39269699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:40504048-40503681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr20:41975482-41975849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
329-486
               

               
Cow position:
               
chr20:32352216-32352370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
329-490
               

               
Cow position:
               
chr20:32354618-32354776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
329-630
               

               
Cow position:
               
chr20:31942656-31942964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
330-541
               

               
Cow position:
               
chr20:30488445-30488658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 186
               

               
Conread position:
               
330-553
               

               
Cow position:
               
chr20:11098623-11098405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
330-554
               

               
Cow position:
               
chr20:6055048-6054824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 127
               

               
Conread position:
               
330-626
               

               
Cow position:
               
chr20:12783103-12783401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
330-662
               

               
Cow position:
               
chr20:16941974-16941653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
330-677
               

               
Cow position:
               
chr20:9007161-9006805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 168
               

               
Conread position:
               
330-680
               

               
Cow position:
               
chr20:3294326-3293980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 257
               

               
Conread position:
               
330-680
               

               
Cow position:
               
chr20:34776566-34776918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
330-689
               

               
Cow position:
               
chr20:9700985-9701343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
330-693
               

               
Cow position:
               
chr20:27002172-27002537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr20:5077630-5077996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 319
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr20:6423410-6423764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 56
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr20:9419543-9419180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 56
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr20:19352332-19351965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 51
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr20:23792037-23792404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 91
               

               
Conread position:
               
331-690
               

               
Cow position:
               
chr20:26078964-26078619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
331-696
               

               
Cow position:
               
chr20:26415739-26415366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
332-682
               

               
Cow position:
               
chr20:581486-581144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 225
               

               
Conread position:
               
333-512
               

               
Cow position:
               
chr20:24543014-24543193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
333-525
               

               
Cow position:
               
chr20:35146409-35146602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
333-547
               

               
Cow position:
               
chr20:28956264-28956051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
333-584
               

               
Cow position:
               
chr20:36418058-36417799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
165, 69
               

               
Conread position:
               
333-631
               

               
Cow position:
               
chr20:5634653-5634354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 78
               

               
Conread position:
               
333-632
               

               
Cow position:
               
chr20:2942754-2943057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
333-634
               

               
Cow position:
               
chr20:10199802-10200105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 248
               

               
Conread position:
               
333-635
               

               
Cow position:
               
chr20:10405373-10405680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 237
               

               
Conread position:
               
333-657
               

               
Cow position:
               
chr20:25274774-25274460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
209, 60
               

               
Conread position:
               
333-657
               

               
Cow position:
               
chr20:27843069-27843398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
211, 158
               

               
Conread position:
               
333-658
               

               
Cow position:
               
chr20:20360378-20360048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
333-662
               

               
Cow position:
               
chr20:7183280-7182941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
333-663
               

               
Cow position:
               
chr20:20983466-20983792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 166
               

               
Conread position:
               
333-663
               

               
Cow position:
               
chr20:21398478-21398808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
333-663
               

               
Cow position:
               
chr20:28888319-28888649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 144
               

               
Conread position:
               
333-663
               

               
Cow position:
               
chr20:39030542-39030209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 63
               

               
Conread position:
               
333-667
               

               
Cow position:
               
chr20:2471706-2471368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
219, 32
               

               
Conread position:
               
333-675
               

               
Cow position:
               
chr20:22027466-22027804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 312
               

               
Conread position:
               
333-680
               

               
Cow position:
               
chr20:23066935-23066584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
215, 157
               

               
Conread position:
               
333-682
               

               
Cow position:
               
chr20:5025910-5025567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 40
               

               
Conread position:
               
333-682
               

               
Cow position:
               
chr20:33180799-33180442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 141
               

               
Conread position:
               
333-684
               

               
Cow position:
               
chr20:3059883-3059527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 100
               

               
Conread position:
               
333-684
               

               
Cow position:
               
chr20:24567594-24567243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 325
               

               
Conread position:
               
333-687
               

               
Cow position:
               
chr20:19410923-19410574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 19
               

               
Conread position:
               
333-688
               

               
Cow position:
               
chr20:31900308-31900662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
216, 120
               

               
Conread position:
               
333-689
               

               
Cow position:
               
chr20:23681839-23681477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 55
               

               
Conread position:
               
333-691
               

               
Cow position:
               
chr20:39875852-39875496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
333-693
               

               
Cow position:
               
chr20:12551853-12552236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
333-695
               

               
Cow position:
               
chr20:31784635-31784273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 326
               

               
Conread position:
               
333-695
               

               
Cow position:
               
chr20:34375650-34376021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
161, 57
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:6017633-6017266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 183
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:6135313-6134964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 206
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:7110684-7110316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 60
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:9536574-9536934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:12996576-12996209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:13269049-13269425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:13877273-13876908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 335
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:14719303-14718940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 332
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:14836863-14837226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 324
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:14926084-14926446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 209
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:15226326-15225964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:17657555-17657199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 244
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:17831280-17831646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 66
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:19441597-19441958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 97
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:21720214-21720577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 325
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:28282748-28283118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:30479787-30480150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 325
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:33540315-33540678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 325
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:41308737-41309093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 177
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:41688076-41688440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 244
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr20:42254378-42254018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 70
               

               
Conread position:
               
334-512
               

               
Cow position:
               
chr20:11888312-11888134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
334-540
               

               
Cow position:
               
chr20:35368668-35368886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
334-556
               

               
Cow position:
               
chr20:5786600-5786823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 172
               

               
Conread position:
               
334-591
               

               
Cow position:
               
chr20:9588029-9588285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
334-655
               

               
Cow position:
               
chr20:35843749-35843429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
334-682
               

               
Cow position:
               
chr20:28141413-28141770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
334-696
               

               
Cow position:
               
chr20:35158912-35158562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 0
               

               
Conread position:
               
335-554
               

               
Cow position:
               
chr20:5786055-5786274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
335-682
               

               
Cow position:
               
chr20:34107395-34107751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
335-696
               

               
Cow position:
               
chr20:41976866-41977222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
338-656
               

               
Cow position:
               
chr20:32938972-32939286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
209, 40
               

               
Conread position:
               
338-682
               

               
Cow position:
               
chr20:20471163-20471509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 80
               

               
Conread position:
               
338-683
               

               
Cow position:
               
chr20:10288366-10288712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 296
               

               
Conread position:
               
341-696
               

               
Cow position:
               
chr20:13114987-13114633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 309
               

               
Conread position:
               
342-696
               

               
Cow position:
               
chr20:9474163-9473814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
342-696
               

               
Cow position:
               
chr20:23679706-23679346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 145
               

               
Conread position:
               
343-519
               

               
Cow position:
               
chr20:19313876-19313700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-531
               

               
Cow position:
               
chr20:5795454-5795641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
343-591
               

               
Cow position:
               
chr20:8890998-8891244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
204, 55
               

               
Conread position:
               
343-598
               

               
Cow position:
               
chr20:41698518-41698264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 167
               

               
Conread position:
               
343-617
               

               
Cow position:
               
chr20:14539836-14540111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
220, 49
               

               
Conread position:
               
343-634
               

               
Cow position:
               
chr20:14740641-14740350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-652
               

               
Cow position:
               
chr20:31564530-31564218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
172, 24
               

               
Conread position:
               
343-660
               

               
Cow position:
               
chr20:29056098-29056415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
147, 168
               

               
Conread position:
               
343-661
               

               
Cow position:
               
chr20:16157938-16157616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
202, 90
               

               
Conread position:
               
343-664
               

               
Cow position:
               
chr20:7933396-7933712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 69
               

               
Conread position:
               
343-664
               

               
Cow position:
               
chr20:27978288-27977960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
170, 147
               

               
Conread position:
               
343-670
               

               
Cow position:
               
chr20:13024717-13024393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
343-680
               

               
Cow position:
               
chr20:40755858-40756214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
166, 56
               

               
Conread position:
               
343-682
               

               
Cow position:
               
chr20:8910357-8910690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
343-684
               

               
Cow position:
               
chr20:7803764-7803418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 85
               

               
Conread position:
               
343-695
               

               
Cow position:
               
chr20:35133396-35133757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr20:6501249-6501599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 155
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr20:9707445-9707097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr20:12839505-12839857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 72
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr20:13325782-13326132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 197
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr20:19340625-19340268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 108
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr20:27565462-27565821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 330
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr20:38488441-38488795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 321
               

               
Conread position:
               
344-502
               

               
Cow position:
               
chr20:3469062-3469220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
344-507
               

               
Cow position:
               
chr20:16584688-16584850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
344-512
               

               
Cow position:
               
chr20:15780376-15780212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
344-512
               

               
Cow position:
               
chr20:30777387-30777554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
344-549
               

               
Cow position:
               
chr20:6436481-6436679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
344-554
               

               
Cow position:
               
chr20:41110739-41110539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
344-591
               

               
Cow position:
               
chr20:28295005-28295254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
344-696
               

               
Cow position:
               
chr20:1744979-1745331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
213, 79
               

               
Conread position:
               
344-696
               

               
Cow position:
               
chr20:5538833-5539186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 246
               

               
Conread position:
               
345-516
               

               
Cow position:
               
chr20:25562943-25562773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
345-555
               

               
Cow position:
               
chr20:2683040-2683246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
345-605
               

               
Cow position:
               
chr20:12552878-12552625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
246, 32
               

               
Conread position:
               
345-619
               

               
Cow position:
               
chr20:29318874-29319147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 0
               

               
Conread position:
               
345-624
               

               
Cow position:
               
chr20:24522879-24523159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
345-660
               

               
Cow position:
               
chr20:3135352-3135672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
202, 73
               

               
Conread position:
               
345-666
               

               
Cow position:
               
chr20:14512386-14512704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 212
               

               
Conread position:
               
345-690
               

               
Cow position:
               
chr20:20546078-20546426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 80
               

               
Conread position:
               
345-692
               

               
Cow position:
               
chr20:30816985-30817333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
345-693
               

               
Cow position:
               
chr20:10686410-10686744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
326, 29
               

               
Conread position:
               
345-696
               

               
Cow position:
               
chr20:33514311-33514662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 313
               

               
Conread position:
               
346-631
               

               
Cow position:
               
chr20:4205332-4205611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
346-682
               

               
Cow position:
               
chr20:14472761-14472424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 39
               

               
Conread position:
               
346-691
               

               
Cow position:
               
chr20:24347479-24347135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 214
               

               
Conread position:
               
346-696
               

               
Cow position:
               
chr20:826476-826826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 312
               

               
Conread position:
               
348-696
               

               
Cow position:
               
chr20:26597526-26597874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 310
               

               
Conread position:
               
349-682
               

               
Cow position:
               
chr20:22211649-22211983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
128, 142
               

               
Conread position:
               
349-691
               

               
Cow position:
               
chr20:17845416-17845745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
202, 21
               

               
Conread position:
               
349-696
               

               
Cow position:
               
chr20:10235297-10235652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 322
               

               
Conread position:
               
350-660
               

               
Cow position:
               
chr20:28464734-28465050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
350-695
               

               
Cow position:
               
chr20:26274065-26273723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
196, 59
               

               
Conread position:
               
350-696
               

               
Cow position:
               
chr20:2942127-2941773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 122
               

               
Conread position:
               
350-696
               

               
Cow position:
               
chr20:15437419-15437765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
351-512
               

               
Cow position:
               
chr20:12489222-12489062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
352-664
               

               
Cow position:
               
chr20:19155471-19155142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
107, 324
               

               
Conread position:
               
352-696
               

               
Cow position:
               
chr20:7527906-7527557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 26
               

               
Conread position:
               
352-696
               

               
Cow position:
               
chr20:10818766-10818424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 24
               

               
Conread position:
               
353-512
               

               
Cow position:
               
chr20:14673244-14673400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
353-580
               

               
Cow position:
               
chr20:26995177-26995406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
353-663
               

               
Cow position:
               
chr20:12155651-12155333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 145
               

               
Conread position:
               
353-681
               

               
Cow position:
               
chr20:35112989-35113318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
353-695
               

               
Cow position:
               
chr20:26679299-26679635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
353-696
               

               
Cow position:
               
chr20:3599941-3599590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 236
               

               
Conread position:
               
353-696
               

               
Cow position:
               
chr20:4756365-4756025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
353-696
               

               
Cow position:
               
chr20:10538781-10539121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 29
               

               
Conread position:
               
353-696
               

               
Cow position:
               
chr20:17734319-17733973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
353-696
               

               
Cow position:
               
chr20:35128673-35129014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 264
               

               
Conread position:
               
354-541
               

               
Cow position:
               
chr20:4950135-4949949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
354-553
               

               
Cow position:
               
chr20:21015307-21015103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
354-616
               

               
Cow position:
               
chr20:25686886-25686615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
98, 6
               

               
Conread position:
               
354-631
               

               
Cow position:
               
chr20:23847506-23847234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 118
               

               
Conread position:
               
355-696
               

               
Cow position:
               
chr20:7710746-7710407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
355-696
               

               
Cow position:
               
chr20:27509824-27510154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
356-511
               

               
Cow position:
               
chr20:18099660-18099817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
356-662
               

               
Cow position:
               
chr20:28440738-28441037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 26
               

               
Conread position:
               
356-682
               

               
Cow position:
               
chr20:39425690-39425365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 58
               

               
Conread position:
               
356-696
               

               
Cow position:
               
chr20:20202687-20203016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 182
               

               
Conread position:
               
357-618
               

               
Cow position:
               
chr20:36439738-36439471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
358-696
               

               
Cow position:
               
chr20:22446172-22445834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
359-598
               

               
Cow position:
               
chr20:16107193-16107432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
359-662
               

               
Cow position:
               
chr20:8349398-8349103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
360-608
               

               
Cow position:
               
chr20:8020615-8020361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 237
               

               
Conread position:
               
360-663
               

               
Cow position:
               
chr20:847561-847250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
362-512
               

               
Cow position:
               
chr20:15527444-15527595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
362-675
               

               
Cow position:
               
chr20:5675938-5676254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
186, 19
               

               
Conread position:
               
362-694
               

               
Cow position:
               
chr20:39742787-39743112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
364-682
               

               
Cow position:
               
chr20:19017560-19017258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
365-475
               

               
Cow position:
               
chr20:27055299-27055189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
365-601
               

               
Cow position:
               
chr20:28822526-28822282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
165, 125
               

               
Conread position:
               
365-695
               

               
Cow position:
               
chr20:32084741-32084419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
365-696
               

               
Cow position:
               
chr20:8429220-8429545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 232
               

               
Conread position:
               
366-696
               

               
Cow position:
               
chr20:14210678-14210355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
299, 74
               

               
Conread position:
               
367-663
               

               
Cow position:
               
chr20:886425-886725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
177, 50
               

               
Conread position:
               
367-694
               

               
Cow position:
               
chr20:15821786-15822115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 262
               

               
Conread position:
               
368-670
               

               
Cow position:
               
chr20:13659857-13659548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
368-682
               

               
Cow position:
               
chr20:30997111-30997414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
369-578
               

               
Cow position:
               
chr20:31741321-31741114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
162, 129
               

               
Conread position:
               
370-539
               

               
Cow position:
               
chr20:5999144-5998975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
370-663
               

               
Cow position:
               
chr20:40512319-40512020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
370-693
               

               
Cow position:
               
chr20:8220299-8219966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
156, 120
               

               
Conread position:
               
370-694
               

               
Cow position:
               
chr20:23838377-23838054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
371-660
               

               
Cow position:
               
chr20:29395727-29396017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
371-664
               

               
Cow position:
               
chr20:9117472-9117179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
371-693
               

               
Cow position:
               
chr20:28439552-28439873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr20:398814-398494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr20:4621861-4621539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 139
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr20:13955515-13955841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
105, 114
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr20:14436271-14436596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 287
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr20:14756595-14756267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 303
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr20:34239811-34240129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 87
               

               
Conread position:
               
373-664
               

               
Cow position:
               
chr20:29586747-29586465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
374-665
               

               
Cow position:
               
chr20:14326903-14326610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 59
               

               
Conread position:
               
374-696
               

               
Cow position:
               
chr20:20353436-20353114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
374-696
               

               
Cow position:
               
chr20:39515779-39515457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 284
               

               
Conread position:
               
375-671
               

               
Cow position:
               
chr20:6447565-6447266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
174, 255
               

               
Conread position:
               
375-696
               

               
Cow position:
               
chr20:1990254-1989939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 124
               

               
Conread position:
               
376-492
               

               
Cow position:
               
chr20:13115103-13114987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
376-696
               

               
Cow position:
               
chr20:13501405-13501735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 298
               

               
Conread position:
               
377-664
               

               
Cow position:
               
chr20:20067821-20068115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 245
               

               
Conread position:
               
377-696
               

               
Cow position:
               
chr20:8577729-8578046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 206
               

               
Conread position:
               
378-664
               

               
Cow position:
               
chr20:9037055-9036765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
110, 243
               

               
Conread position:
               
379-633
               

               
Cow position:
               
chr20:9269168-9269429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
121, 105
               

               
Conread position:
               
379-675
               

               
Cow position:
               
chr20:8718604-8718902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
379-695
               

               
Cow position:
               
chr20:21767902-21767590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
162, 37
               

               
Conread position:
               
379-696
               

               
Cow position:
               
chr20:3159774-3160095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
170, 122
               

               
Conread position:
               
379-696
               

               
Cow position:
               
chr20:16957335-16957024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
379-696
               

               
Cow position:
               
chr20:19363878-19363562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 226
               

               
Conread position:
               
380-654
               

               
Cow position:
               
chr20:19667422-19667701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
168, 110
               

               
Conread position:
               
380-664
               

               
Cow position:
               
chr20:17582294-17582575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
380-696
               

               
Cow position:
               
chr20:4895411-4895093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
168, 8
               

               
Conread position:
               
381-541
               

               
Cow position:
               
chr20:5119829-5119671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
381-589
               

               
Cow position:
               
chr20:42468971-42469182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
381-660
               

               
Cow position:
               
chr20:42790855-42790581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
381-696
               

               
Cow position:
               
chr20:11549850-11550166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 283
               

               
Conread position:
               
381-696
               

               
Cow position:
               
chr20:25297099-25296787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 0
               

               
Conread position:
               
381-696
               

               
Cow position:
               
chr20:34883720-34883402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
168, 13
               

               
Conread position:
               
382-522
               

               
Cow position:
               
chr20:23505342-23505484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
382-618
               

               
Cow position:
               
chr20:13385012-13385253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
166, 116
               

               
Conread position:
               
382-690
               

               
Cow position:
               
chr20:12141559-12141252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
166, 106
               

               
Conread position:
               
382-690
               

               
Cow position:
               
chr20:13063583-13063897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
382-693
               

               
Cow position:
               
chr20:4706668-4706352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
382-693
               

               
Cow position:
               
chr20:33355916-33356222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
382-696
               

               
Cow position:
               
chr20:27332213-27331899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
178, 55
               

               
Conread position:
               
382-696
               

               
Cow position:
               
chr20:27895760-27895459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
169, 51
               

               
Conread position:
               
383-690
               

               
Cow position:
               
chr20:23332439-23332125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
108, 98
               

               
Conread position:
               
383-693
               

               
Cow position:
               
chr20:23143118-23142813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
165, 26
               

               
Conread position:
               
384-690
               

               
Cow position:
               
chr20:39602951-39602642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
175, 23
               

               
Conread position:
               
384-696
               

               
Cow position:
               
chr20:13789799-13790109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 168
               

               
Conread position:
               
385-662
               

               
Cow position:
               
chr20:41031673-41031945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 171
               

               
Conread position:
               
386-617
               

               
Cow position:
               
chr20:8869792-8869553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
386-648
               

               
Cow position:
               
chr20:28067896-28067638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
386-690
               

               
Cow position:
               
chr20:7510881-7511182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
386-693
               

               
Cow position:
               
chr20:12442205-12441894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
386-696
               

               
Cow position:
               
chr20:3389049-3388745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
171, 54
               

               
Conread position:
               
386-696
               

               
Cow position:
               
chr20:5104944-5104634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
388-693
               

               
Cow position:
               
chr20:13817337-13817647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
160, 251
               

               
Conread position:
               
389-664
               

               
Cow position:
               
chr20:7442660-7442376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 182
               

               
Conread position:
               
389-694
               

               
Cow position:
               
chr20:11171383-11171687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 135
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr20:10497707-10497400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 276
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr20:29308301-29307994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 269
               

               
Conread position:
               
390-664
               

               
Cow position:
               
chr20:26104969-26104692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
392-612
               

               
Cow position:
               
chr20:23107141-23107358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
161, 36
               

               
Conread position:
               
392-683
               

               
Cow position:
               
chr20:25162593-25162320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
273, 105
               

               
Conread position:
               
394-682
               

               
Cow position:
               
chr20:34099557-34099280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
395-525
               

               
Cow position:
               
chr20:20351354-20351225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
404-596
               

               
Cow position:
               
chr20:21688108-21687911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
404-663
               

               
Cow position:
               
chr20:35690302-35690039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 14
               

               
Conread position:
               
404-675
               

               
Cow position:
               
chr20:1874000-1873725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
404-677
               

               
Cow position:
               
chr20:4672434-4672712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 234
               

               
Conread position:
               
404-680
               

               
Cow position:
               
chr20:12684657-12684393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
404-690
               

               
Cow position:
               
chr20:24098946-24099233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
404-693
               

               
Cow position:
               
chr20:4735510-4735213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
145, 101
               

               
Conread position:
               
404-696
               

               
Cow position:
               
chr20:5939468-5939174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 230
               

               
Conread position:
               
405-692
               

               
Cow position:
               
chr20:22313647-22313364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 150
               

               
Conread position:
               
406-670
               

               
Cow position:
               
chr20:42137896-42138148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
406-696
               

               
Cow position:
               
chr20:6096972-6096685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 15
               

               
Conread position:
               
408-681
               

               
Cow position:
               
chr20:31349763-31350033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
408-696
               

               
Cow position:
               
chr20:3781920-3781627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
409-693
               

               
Cow position:
               
chr20:34836351-34836070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 0
               

               
Conread position:
               
409-696
               

               
Cow position:
               
chr20:33994501-33994214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 249
               

               
Conread position:
               
411-603
               

               
Cow position:
               
chr20:41419689-41419886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
411-654
               

               
Cow position:
               
chr20:14735170-14735418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 175
               

               
Conread position:
               
411-681
               

               
Cow position:
               
chr20:22850631-22850903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 217
               

               
Conread position:
               
411-683
               

               
Cow position:
               
chr20:13094514-13094234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 228
               

               
Conread position:
               
413-598
               

               
Cow position:
               
chr20:39418362-39418179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
413-682
               

               
Cow position:
               
chr20:12206588-12206326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
91, 204
               

               
Conread position:
               
413-696
               

               
Cow position:
               
chr20:3745142-3745423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 13
               

               
Conread position:
               
414-670
               

               
Cow position:
               
chr20:39023504-39023251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
414-690
               

               
Cow position:
               
chr20:26683869-26683595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 76
               

               
Conread position:
               
414-690
               

               
Cow position:
               
chr20:38935690-38935418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 168
               

               
Conread position:
               
417-678
               

               
Cow position:
               
chr20:25293088-25293345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
417-696
               

               
Cow position:
               
chr20:11614523-11614243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 249
               

               
Conread position:
               
417-696
               

               
Cow position:
               
chr20:18529963-18530248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
418-670
               

               
Cow position:
               
chr20:5668985-5668729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
124, 175
               

               
Conread position:
               
418-696
               

               
Cow position:
               
chr20:18185097-18185379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
135, 19
               

               
Conread position:
               
418-696
               

               
Cow position:
               
chr20:23902367-23902644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
418-696
               

               
Cow position:
               
chr20:32846875-32847152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 164
               

               
Conread position:
               
421-654
               

               
Cow position:
               
chr20:24391527-24391758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
421-682
               

               
Cow position:
               
chr20:24209503-24209768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 69
               

               
Conread position:
               
423-683
               

               
Cow position:
               
chr20:18550878-18551126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
248, 67
               

               
Conread position:
               
425-624
               

               
Cow position:
               
chr20:41956492-41956697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
427-622
               

               
Cow position:
               
chr20:12584955-12584760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
427-670
               

               
Cow position:
               
chr20:26881400-26881148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
105, 198
               

               
Conread position:
               
427-690
               

               
Cow position:
               
chr20:4893387-4893117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
427-696
               

               
Cow position:
               
chr20:2178583-2178314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
427-696
               

               
Cow position:
               
chr20:5644354-5644633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
427-696
               

               
Cow position:
               
chr20:19653771-19653502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 123
               

               
Conread position:
               
428-662
               

               
Cow position:
               
chr20:16587013-16586778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
428-664
               

               
Cow position:
               
chr20:25352663-25352424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
428-668
               

               
Cow position:
               
chr20:18970682-18970934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 248
               

               
Conread position:
               
428-684
               

               
Cow position:
               
chr20:9659699-9659945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
243, 128
               

               
Conread position:
               
428-696
               

               
Cow position:
               
chr20:4950888-4950620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 235
               

               
Conread position:
               
429-552
               

               
Cow position:
               
chr20:6602421-6602543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
429-690
               

               
Cow position:
               
chr20:11635238-11634977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
430-696
               

               
Cow position:
               
chr20:4746428-4746162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 228
               

               
Conread position:
               
430-696
               

               
Cow position:
               
chr20:26076616-26076885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
115, 239
               

               
Conread position:
               
431-696
               

               
Cow position:
               
chr20:32866810-32866546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 108
               

               
Conread position:
               
433-640
               

               
Cow position:
               
chr20:42931628-42931839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
433-696
               

               
Cow position:
               
chr20:3308659-3308921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
434-690
               

               
Cow position:
               
chr20:1191430-1191686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 229
               

               
Conread position:
               
434-693
               

               
Cow position:
               
chr20:30039310-30039043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 108
               

               
Conread position:
               
434-696
               

               
Cow position:
               
chr20:31221022-31221289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
228, 0
               

               
Conread position:
               
435-637
               

               
Cow position:
               
chr20:9066377-9066584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
436-660
               

               
Cow position:
               
chr20:8926458-8926228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
440-682
               

               
Cow position:
               
chr20:15909598-15909844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
440-690
               

               
Cow position:
               
chr20:12274094-12273840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 184
               

               
Conread position:
               
440-696
               

               
Cow position:
               
chr20:9014804-9014548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 223
               

               
Conread position:
               
441-621
               

               
Cow position:
               
chr20:25010386-25010207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
441-670
               

               
Cow position:
               
chr20:26469531-26469305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
441-682
               

               
Cow position:
               
chr20:8661480-8661723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
441-696
               

               
Cow position:
               
chr20:11751070-11750821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
218, 57
               

               
Conread position:
               
446-661
               

               
Cow position:
               
chr20:4329178-4328961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 130
               

               
Conread position:
               
446-696
               

               
Cow position:
               
chr20:37439180-37439430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
225, 212
               

               
Conread position:
               
447-696
               

               
Cow position:
               
chr20:9267576-9267322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
104, 222
               

               
Conread position:
               
448-670
               

               
Cow position:
               
chr20:2486791-2487016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
32, 219
               

               
Conread position:
               
449-677
               

               
Cow position:
               
chr20:21371847-21372080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
99, 213
               

               
Conread position:
               
452-690
               

               
Cow position:
               
chr20:774674-774436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
219, 206
               

               
Conread position:
               
454-696
               

               
Cow position:
               
chr20:30298299-30298550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 150
               

               
Conread position:
               
455-696
               

               
Cow position:
               
chr20:21952783-21953024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
216, 203
               

               
Conread position:
               
456-694
               

               
Cow position:
               
chr20:33363075-33363318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
457-688
               

               
Cow position:
               
chr20:7568021-7567785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 211
               

               
Conread position:
               
457-688
               

               
Cow position:
               
chr20:7592507-7592271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 211
               

               
Conread position:
               
459-696
               

               
Cow position:
               
chr20:6549905-6549671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
459-696
               

               
Cow position:
               
chr20:10146271-10146507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
212, 6
               

               
Conread position:
               
459-696
               

               
Cow position:
               
chr20:17820641-17820403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
461-648
               

               
Cow position:
               
chr20:15076580-15076770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
461-682
               

               
Cow position:
               
chr20:10850953-10850728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
461-690
               

               
Cow position:
               
chr20:15079094-15078865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
211, 198
               

               
Conread position:
               
461-696
               

               
Cow position:
               
chr20:10178529-10178311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
205, 23
               

               
Conread position:
               
461-696
               

               
Cow position:
               
chr20:15937274-15937507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
210, 78
               

               
Conread position:
               
461-696
               

               
Cow position:
               
chr20:30462649-30462889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
462-696
               

               
Cow position:
               
chr20:13267862-13267633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
209, 120
               

               
Conread position:
               
463-682
               

               
Cow position:
               
chr20:4781130-4781340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
150, 23
               

               
Conread position:
               
463-696
               

               
Cow position:
               
chr20:35011303-35011067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 184
               

               
Conread position:
               
464-663
               

               
Cow position:
               
chr20:13652795-13652597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
464-693
               

               
Cow position:
               
chr20:17889518-17889291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
208, 20
               

               
Conread position:
               
465-689
               

               
Cow position:
               
chr20:23065274-23065044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 204
               

               
Conread position:
               
465-696
               

               
Cow position:
               
chr20:7596776-7596545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
207, 200
               

               
Conread position:
               
465-696
               

               
Cow position:
               
chr20:16714973-16715200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
207, 165
               

               
Conread position:
               
466-696
               

               
Cow position:
               
chr20:21959485-21959255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
467-696
               

               
Cow position:
               
chr20:13822017-13821782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
467-696
               

               
Cow position:
               
chr20:33810681-33810910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
204, 191
               

               
Conread position:
               
468-696
               

               
Cow position:
               
chr20:33248573-33248799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr20:11350507-11350734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
202, 189
               

               
Conread position:
               
470-696
               

               
Cow position:
               
chr20:14011559-14011770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
201, 146
               

               
Conread position:
               
471-680
               

               
Cow position:
               
chr20:12041589-12041392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
473-695
               

               
Cow position:
               
chr20:27641713-27641935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
198, 190
               

               
Conread position:
               
474-652
               

               
Cow position:
               
chr20:8096601-8096424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
474-695
               

               
Cow position:
               
chr20:8101452-8101248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
198, 34
               

               
Conread position:
               
476-682
               

               
Cow position:
               
chr20:25822802-25823014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
476-696
               

               
Cow position:
               
chr20:28725865-28726085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
479-653
               

               
Cow position:
               
chr20:13828635-13828809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
479-693
               

               
Cow position:
               
chr20:14636858-14637072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
192, 179
               

               
Conread position:
               
479-696
               

               
Cow position:
               
chr20:7641744-7641961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
192, 179
               

               
Conread position:
               
479-696
               

               
Cow position:
               
chr20:34001806-34001596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
481-696
               

               
Cow position:
               
chr20:36780150-36779930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
484-663
               

               
Cow position:
               
chr20:21928269-21928455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
484-680
               

               
Cow position:
               
chr20:14832037-14831837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 99
               

               
Conread position:
               
484-690
               

               
Cow position:
               
chr20:14181291-14181079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 193
               

               
Conread position:
               
484-693
               

               
Cow position:
               
chr20:36399224-36399021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
484-696
               

               
Cow position:
               
chr20:5097645-5097433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
187, 174
               

               
Conread position:
               
485-696
               

               
Cow position:
               
chr20:12047997-12048208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
490-662
               

               
Cow position:
               
chr20:32352590-32352761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
490-662
               

               
Cow position:
               
chr20:32355002-32355172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
490-666
               

               
Cow position:
               
chr20:27992888-27992713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
490-682
               

               
Cow position:
               
chr20:30396124-30395940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
175, 67
               

               
Conread position:
               
490-696
               

               
Cow position:
               
chr20:31927864-31927658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
491-696
               

               
Cow position:
               
chr20:24388518-24388723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
180, 167
               

               
Conread position:
               
493-655
               

               
Cow position:
               
chr20:28593790-28593952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-696
               

               
Cow position:
               
chr20:29990872-29990677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
177, 56
               

               
Conread position:
               
496-694
               

               
Cow position:
               
chr20:10859766-10859567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
8, 171
               

               
Conread position:
               
497-696
               

               
Cow position:
               
chr20:34095447-34095652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
500-690
               

               
Cow position:
               
chr20:11720578-11720767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
500-696
               

               
Cow position:
               
chr20:7595557-7595751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
171, 11
               

               
Conread position:
               
500-696
               

               
Cow position:
               
chr20:9340397-9340589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
502-696
               

               
Cow position:
               
chr20:2433025-2433219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
169, 156
               

               
Conread position:
               
502-696
               

               
Cow position:
               
chr20:11176641-11176447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
170, 163
               

               
Conread position:
               
502-696
               

               
Cow position:
               
chr20:18100025-18100219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
169, 161
               

               
Conread position:
               
502-696
               

               
Cow position:
               
chr20:32548575-32548768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
169, 59
               

               
Conread position:
               
503-696
               

               
Cow position:
               
chr20:39375795-39375987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
168, 154
               

               
Conread position:
               
504-696
               

               
Cow position:
               
chr20:29979638-29979830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
167, 154
               

               
Conread position:
               
505-696
               

               
Cow position:
               
chr20:12012936-12013129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
41, 160
               

               
Conread position:
               
506-690
               

               
Cow position:
               
chr20:33568559-33568742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
165, 72
               

               
Conread position:
               
506-696
               

               
Cow position:
               
chr20:21888823-21888641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
507-696
               

               
Cow position:
               
chr20:7399082-7398893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
165, 158
               

               
Conread position:
               
509-696
               

               
Cow position:
               
chr20:40176866-40177052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
162, 123
               

               
Conread position:
               
510-661
               

               
Cow position:
               
chr20:28604829-28604979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
510-696
               

               
Cow position:
               
chr20:5702362-5702545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
510-696
               

               
Cow position:
               
chr20:31747009-31746823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
162, 156
               

               
Conread position:
               
511-696
               

               
Cow position:
               
chr20:3378167-3378351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
160, 27
               

               
Conread position:
               
511-696
               

               
Cow position:
               
chr20:3501909-3502094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 152
               

               
Conread position:
               
511-696
               

               
Cow position:
               
chr20:7646146-7645961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
512-695
               

               
Cow position:
               
chr20:28500236-28500053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
160, 147
               

               
Conread position:
               
512-696
               

               
Cow position:
               
chr20:3034719-3034894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
512-696
               

               
Cow position:
               
chr20:4578988-4578804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
159, 146
               

               
Conread position:
               
512-696
               

               
Cow position:
               
chr20:22920546-22920360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
513-693
               

               
Cow position:
               
chr20:8278211-8278028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
132, 141
               

               
Conread position:
               
514-656
               

               
Cow position:
               
chr20:20966975-20967117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
514-695
               

               
Cow position:
               
chr20:18321176-18320998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
514-695
               

               
Cow position:
               
chr20:32583168-32582988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
514-696
               

               
Cow position:
               
chr20:38350948-38350766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
516-696
               

               
Cow position:
               
chr20:11887852-11887672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
155, 142
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr20:4801015-4801195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr20:9082534-9082356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
153, 140
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr20:15777534-15777355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
519-680
               

               
Cow position:
               
chr20:32087791-32087953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 146
               

               
Conread position:
               
519-695
               

               
Cow position:
               
chr20:3659077-3658898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
519-696
               

               
Cow position:
               
chr20:39377516-39377341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 114
               

               
Conread position:
               
521-696
               

               
Cow position:
               
chr20:33170246-33170074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
522-689
               

               
Cow position:
               
chr20:39137582-39137415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
149, 141
               

               
Conread position:
               
522-696
               

               
Cow position:
               
chr20:24543469-24543642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
150, 107
               

               
Conread position:
               
522-696
               

               
Cow position:
               
chr20:33531936-33532111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
523-696
               

               
Cow position:
               
chr20:22896954-22897127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
148, 135
               

               
Conread position:
               
523-696
               

               
Cow position:
               
chr20:35995306-35995132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
524-696
               

               
Cow position:
               
chr20:17909334-17909160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 137
               

               
Conread position:
               
525-695
               

               
Cow position:
               
chr20:19460011-19459845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
527-696
               

               
Cow position:
               
chr20:23164247-23164070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
529-696
               

               
Cow position:
               
chr20:19313432-19313266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
143, 136
               

               
Conread position:
               
529-696
               

               
Cow position:
               
chr20:41371596-41371765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
531-696
               

               
Cow position:
               
chr20:40304213-40304048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
533-696
               

               
Cow position:
               
chr20:38817654-38817811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
534-690
               

               
Cow position:
               
chr20:2907238-2907082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 129
               

               
Conread position:
               
534-694
               

               
Cow position:
               
chr20:32191394-32191234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
137, 124
               

               
Conread position:
               
535-696
               

               
Cow position:
               
chr20:28982341-28982498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
535-696
               

               
Cow position:
               
chr20:31252170-31252328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
538-696
               

               
Cow position:
               
chr20:34325925-34325767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
133, 125
               

               
Conread position:
               
539-696
               

               
Cow position:
               
chr20:646690-646847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
132, 119
               

               
Conread position:
               
539-696
               

               
Cow position:
               
chr20:2882736-2882893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
540-696
               

               
Cow position:
               
chr20:30482591-30482440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
540-696
               

               
Cow position:
               
chr20:30836205-30836360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
541-696
               

               
Cow position:
               
chr20:17903804-17903956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
542-682
               

               
Cow position:
               
chr20:27299097-27298956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 122
               

               
Conread position:
               
546-689
               

               
Cow position:
               
chr20:31880452-31880593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
547-696
               

               
Cow position:
               
chr20:12334033-12334182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
549-690
               

               
Cow position:
               
chr20:11482624-11482484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
549-690
               

               
Cow position:
               
chr20:24069468-24069609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 122
               

               
Conread position:
               
551-696
               

               
Cow position:
               
chr20:868897-868750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
551-696
               

               
Cow position:
               
chr20:19750967-19751109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
551-696
               

               
Cow position:
               
chr20:26316157-26316014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
557-696
               

               
Cow position:
               
chr20:8763548-8763685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr20:17806924-17806789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 97
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr20:34899824-34899959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 97
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr20:40119722-40119587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 98
               

               
Conread position:
               
562-696
               

               
Cow position:
               
chr20:28100369-28100503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
109, 96
               

               
Conread position:
               
563-696
               

               
Cow position:
               
chr20:9279586-9279453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
563-696
               

               
Cow position:
               
chr20:10790975-10791108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
563-696
               

               
Cow position:
               
chr20:15009398-15009531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
563-696
               

               
Cow position:
               
chr20:18440523-18440391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 46
               

               
Conread position:
               
563-696
               

               
Cow position:
               
chr20:22216988-22217121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
564-695
               

               
Cow position:
               
chr20:6889948-6890078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
564-696
               

               
Cow position:
               
chr20:9412164-9412296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
99, 107
               

               
Conread position:
               
564-696
               

               
Cow position:
               
chr20:15577223-15577091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 95
               

               
Conread position:
               
565-695
               

               
Cow position:
               
chr20:13712436-13712307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
565-696
               

               
Cow position:
               
chr20:32667659-32667790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 97
               

               
Conread position:
               
566-696
               

               
Cow position:
               
chr20:31854908-31854778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 93
               

               
Conread position:
               
566-696
               

               
Cow position:
               
chr20:35640705-35640835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 92
               

               
Conread position:
               
572-690
               

               
Cow position:
               
chr20:35907590-35907472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 114
               

               
Conread position:
               
572-696
               

               
Cow position:
               
chr20:20485602-20485478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 96
               

               
Conread position:
               
572-696
               

               
Cow position:
               
chr20:20693149-20693025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
572-696
               

               
Cow position:
               
chr20:23355142-23355018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
572-696
               

               
Cow position:
               
chr20:36052074-36052198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
575-696
               

               
Cow position:
               
chr20:4902124-4902245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
575-696
               

               
Cow position:
               
chr20:16628381-16628502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
575-696
               

               
Cow position:
               
chr20:26349249-26349370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
577-696
               

               
Cow position:
               
chr20:20700659-20700540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
585-696
               

               
Cow position:
               
chr20:32452054-32452165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
585-696
               

               
Cow position:
               
chr20:35064257-35064147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
585-696
               

               
Cow position:
               
chr20:40396787-40396898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 86
               
Show alignments to all cow chromosomes.