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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8018L10.3
        

               
Conread position:
               
299-664
               

               
Cow position:
               
chr29:29929156-29929521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-675
               

               
Cow position:
               
chr29:7956595-7956233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
313-491
               

               
Cow position:
               
chr29:1332878-1332702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-504
               

               
Cow position:
               
chr29:35037626-35037815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
313-553
               

               
Cow position:
               
chr29:16519725-16519962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 9
               

               
Conread position:
               
313-648
               

               
Cow position:
               
chr29:15762273-15762614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-653
               

               
Cow position:
               
chr29:19894582-19894912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
313-663
               

               
Cow position:
               
chr29:10652714-10653062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-670
               

               
Cow position:
               
chr29:29138825-29138462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-682
               

               
Cow position:
               
chr29:11433310-11433685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 20
               

               
Conread position:
               
313-696
               

               
Cow position:
               
chr29:2402292-2402674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 345
               

               
Conread position:
               
313-696
               

               
Cow position:
               
chr29:30106254-30105865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
313-696
               

               
Cow position:
               
chr29:32807965-32808353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
313-696
               

               
Cow position:
               
chr29:38229609-38229989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
317-552
               

               
Cow position:
               
chr29:20999952-21000182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
317-696
               

               
Cow position:
               
chr29:20254771-20255152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 271
               

               
Conread position:
               
318-696
               

               
Cow position:
               
chr29:15941281-15940882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
176, 360
               

               
Conread position:
               
319-456
               

               
Cow position:
               
chr29:12798194-12798333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
320-578
               

               
Cow position:
               
chr29:30391914-30391657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
320-696
               

               
Cow position:
               
chr29:43729448-43729824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 287
               

               
Conread position:
               
322-512
               

               
Cow position:
               
chr29:19657494-19657686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
322-517
               

               
Cow position:
               
chr29:26222700-26222896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
322-624
               

               
Cow position:
               
chr29:21255575-21255862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
322-680
               

               
Cow position:
               
chr29:2624133-2623772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
322-682
               

               
Cow position:
               
chr29:2367429-2367062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 172
               

               
Conread position:
               
322-685
               

               
Cow position:
               
chr29:16042282-16042650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 338
               

               
Conread position:
               
322-693
               

               
Cow position:
               
chr29:17408717-17409086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
322-693
               

               
Cow position:
               
chr29:26263233-26263608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 190
               

               
Conread position:
               
322-696
               

               
Cow position:
               
chr29:727342-727717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 338
               

               
Conread position:
               
323-446
               

               
Cow position:
               
chr29:44020282-44020157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
323-448
               

               
Cow position:
               
chr29:19523119-19523246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-454
               

               
Cow position:
               
chr29:10159143-10159009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-459
               

               
Cow position:
               
chr29:13849378-13849240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-467
               

               
Cow position:
               
chr29:38717031-38717177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-489
               

               
Cow position:
               
chr29:5961890-5962058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-500
               

               
Cow position:
               
chr29:14207954-14207775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-503
               

               
Cow position:
               
chr29:20904927-20904745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-508
               

               
Cow position:
               
chr29:25087957-25088143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
323-511
               

               
Cow position:
               
chr29:6218203-6218010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr29:8934670-8934861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr29:19398273-19398461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr29:42255365-42255174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-513
               

               
Cow position:
               
chr29:21429250-21429058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr29:35280533-35280338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr29:41183567-41183373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
323-530
               

               
Cow position:
               
chr29:2104411-2104620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-540
               

               
Cow position:
               
chr29:17965421-17965643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 181
               

               
Conread position:
               
323-541
               

               
Cow position:
               
chr29:2950280-2950500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-545
               

               
Cow position:
               
chr29:2484517-2484293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 178
               

               
Conread position:
               
323-546
               

               
Cow position:
               
chr29:13129628-13129851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
323-547
               

               
Cow position:
               
chr29:26331668-26331893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
323-548
               

               
Cow position:
               
chr29:10639060-10638837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
323-553
               

               
Cow position:
               
chr29:8493602-8493376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
323-554
               

               
Cow position:
               
chr29:14619282-14619514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
323-555
               

               
Cow position:
               
chr29:26997458-26997687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
323-555
               

               
Cow position:
               
chr29:27619219-27619446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
176, 40
               

               
Conread position:
               
323-560
               

               
Cow position:
               
chr29:13077323-13077555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
323-567
               

               
Cow position:
               
chr29:12160131-12159892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
323-575
               

               
Cow position:
               
chr29:40116938-40117189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
323-576
               

               
Cow position:
               
chr29:19124504-19124752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
323-577
               

               
Cow position:
               
chr29:29505771-29505520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
323-578
               

               
Cow position:
               
chr29:29556520-29556271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
323-586
               

               
Cow position:
               
chr29:2482942-2482672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 178
               

               
Conread position:
               
323-587
               

               
Cow position:
               
chr29:27814390-27814654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 227
               

               
Conread position:
               
323-602
               

               
Cow position:
               
chr29:109059-109343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
323-611
               

               
Cow position:
               
chr29:13611275-13610987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 226
               

               
Conread position:
               
323-617
               

               
Cow position:
               
chr29:13058317-13058618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
323-625
               

               
Cow position:
               
chr29:16195222-16195513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
323-639
               

               
Cow position:
               
chr29:20710368-20710697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
323-648
               

               
Cow position:
               
chr29:26980889-26981211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
323-652
               

               
Cow position:
               
chr29:578323-578001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
323-653
               

               
Cow position:
               
chr29:4755638-4755309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
323-653
               

               
Cow position:
               
chr29:17117315-17117645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
323-662
               

               
Cow position:
               
chr29:984241-984586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-662
               

               
Cow position:
               
chr29:18072309-18072660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-663
               

               
Cow position:
               
chr29:29303524-29303172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
11, 158
               

               
Conread position:
               
323-663
               

               
Cow position:
               
chr29:34806222-34805879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-664
               

               
Cow position:
               
chr29:21167881-21168234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 231
               

               
Conread position:
               
323-665
               

               
Cow position:
               
chr29:10297120-10296782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
323-666
               

               
Cow position:
               
chr29:13027817-13028160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 210
               

               
Conread position:
               
323-666
               

               
Cow position:
               
chr29:18212616-18212249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
323-669
               

               
Cow position:
               
chr29:6871658-6871308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
323-669
               

               
Cow position:
               
chr29:19251646-19251992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 255
               

               
Conread position:
               
323-669
               

               
Cow position:
               
chr29:32962921-32963268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
323-670
               

               
Cow position:
               
chr29:4001799-4002147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 192
               

               
Conread position:
               
323-671
               

               
Cow position:
               
chr29:17132235-17131886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
323-671
               

               
Cow position:
               
chr29:43517350-43516992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
323-679
               

               
Cow position:
               
chr29:13553522-13553883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 249
               

               
Conread position:
               
323-680
               

               
Cow position:
               
chr29:95198-94835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 295
               

               
Conread position:
               
323-680
               

               
Cow position:
               
chr29:649651-650008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
323-680
               

               
Cow position:
               
chr29:8136873-8136506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 227
               

               
Conread position:
               
323-682
               

               
Cow position:
               
chr29:3539876-3539515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
323-682
               

               
Cow position:
               
chr29:22466522-22466877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
323-683
               

               
Cow position:
               
chr29:7848005-7848366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 206
               

               
Conread position:
               
323-689
               

               
Cow position:
               
chr29:2694314-2694683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-689
               

               
Cow position:
               
chr29:35739119-35738755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
323-690
               

               
Cow position:
               
chr29:13639967-13639603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
323-691
               

               
Cow position:
               
chr29:26968347-26968716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 143
               

               
Conread position:
               
323-692
               

               
Cow position:
               
chr29:27008578-27008945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
323-692
               

               
Cow position:
               
chr29:28506464-28506839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 297
               

               
Conread position:
               
323-692
               

               
Cow position:
               
chr29:32644292-32644666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
323-693
               

               
Cow position:
               
chr29:1743113-1743485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-693
               

               
Cow position:
               
chr29:6925399-6925775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 346
               

               
Conread position:
               
323-693
               

               
Cow position:
               
chr29:9511595-9511221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
323-693
               

               
Cow position:
               
chr29:13585818-13586190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-693
               

               
Cow position:
               
chr29:36209310-36209681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
323-693
               

               
Cow position:
               
chr29:38215277-38214894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 200
               

               
Conread position:
               
323-694
               

               
Cow position:
               
chr29:7427527-7427156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 248
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr29:17109370-17109725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr29:25927173-25926799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr29:31765653-31766028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr29:34780371-34780000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 225
               

               
Conread position:
               
323-695
               

               
Cow position:
               
chr29:35434251-35434625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 342
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:292101-292476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:406881-406508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:607034-606659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 340
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:735158-734782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:2103455-2103830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:2520960-2521337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 339
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:2744890-2744516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:2837677-2837302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 342
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:4120237-4120602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:4326876-4327251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:5426240-5425869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 235
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:5550384-5550756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:6935097-6935471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 273
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:7666649-7666273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:7811582-7811210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:8589123-8588748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 342
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:8623619-8623250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:9079190-9078817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 267
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:9641537-9641910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:10032039-10031664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:10145863-10145488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:10452205-10451811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 361
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:10820101-10819729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 342
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:13101522-13101894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:13590329-13589955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 187
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:13652668-13653049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 185
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:13923692-13924067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:15755553-15755178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:15943954-15944325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:15965940-15965565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:16065323-16065698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:16185165-16184790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:16347825-16348197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 169
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:17077627-17077993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:19514725-19514350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 344
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:19524526-19524152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:19619655-19619283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 261
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:19857071-19857448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:19891176-19891547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:21227589-21227964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:21231468-21231093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:21443963-21443588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 342
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:23980341-23980716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 342
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:24346079-24345708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:24669325-24669702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:24728687-24728312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:26285648-26285276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:26289703-26289330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:27702691-27703064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 244
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:28696766-28696412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:28990350-28990701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 63
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:31093948-31093573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:31184990-31185363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:32292208-32292580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:32353209-32353584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:32732712-32733086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 323
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:34746274-34745898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 343
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:35076744-35077119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:35736007-35735631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:36633450-36633078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:37617536-37617908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 342
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:38247372-38246989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 350
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:38349748-38349372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:38672480-38672104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 338
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:39075822-39075447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:39214236-39213861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 337
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:40498266-40497891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 342
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:43327411-43327779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:45208113-45208484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
323-696
               

               
Cow position:
               
chr29:45650937-45650586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
324-428
               

               
Cow position:
               
chr29:14037241-14037137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
324-636
               

               
Cow position:
               
chr29:11695916-11696236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
324-693
               

               
Cow position:
               
chr29:45583421-45583053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 166
               

               
Conread position:
               
324-696
               

               
Cow position:
               
chr29:961309-961675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
324-696
               

               
Cow position:
               
chr29:16609136-16609494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 11
               

               
Conread position:
               
325-456
               

               
Cow position:
               
chr29:6921131-6920998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
325-681
               

               
Cow position:
               
chr29:39332193-39331837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
327-493
               

               
Cow position:
               
chr29:21528799-21528643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
327-531
               

               
Cow position:
               
chr29:15830660-15830454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
327-652
               

               
Cow position:
               
chr29:16097921-16097601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
327-680
               

               
Cow position:
               
chr29:16187076-16187422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
327-682
               

               
Cow position:
               
chr29:7724279-7724644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 330
               

               
Conread position:
               
327-692
               

               
Cow position:
               
chr29:16012358-16011993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 176
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:4201506-4201875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 336
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:4519362-4519723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:5187395-5187032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:8681562-8681195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:9638920-9638556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:10154652-10155020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:10156901-10156533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 184
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:13018006-13017634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 341
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:20244675-20245042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 162
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:32556127-32555759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 332
               

               
Conread position:
               
327-696
               

               
Cow position:
               
chr29:45762804-45762442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
328-467
               

               
Cow position:
               
chr29:15104949-15105087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-474
               

               
Cow position:
               
chr29:21474771-21474916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-488
               

               
Cow position:
               
chr29:13876695-13876854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-495
               

               
Cow position:
               
chr29:2461778-2461944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-541
               

               
Cow position:
               
chr29:32560395-32560183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-554
               

               
Cow position:
               
chr29:17458532-17458307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-554
               

               
Cow position:
               
chr29:20075204-20075429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-588
               

               
Cow position:
               
chr29:40294929-40295188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-617
               

               
Cow position:
               
chr29:21199634-21199346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-655
               

               
Cow position:
               
chr29:15698835-15698509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:527215-526848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:2400976-2401343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:4610983-4611349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:6413903-6414270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:11119090-11118723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:13128528-13128161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:13623752-13623385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:14568918-14569285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:15251471-15251838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:15570156-15570523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:15768004-15767637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:18011193-18011560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:20014666-20014299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:22341134-22341501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:24982949-24982583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:32298346-32298713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:32329638-32329271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:32378193-32378560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:34865209-34865576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:39047722-39048089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr29:40157366-40157733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 5
               

               
Conread position:
               
330-494
               

               
Cow position:
               
chr29:27823714-27823877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
330-512
               

               
Cow position:
               
chr29:16209982-16209800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
330-522
               

               
Cow position:
               
chr29:4367058-4367251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
138, 76
               

               
Conread position:
               
330-552
               

               
Cow position:
               
chr29:10643792-10643570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
159, 86
               

               
Conread position:
               
330-580
               

               
Cow position:
               
chr29:9799961-9800211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 109
               

               
Conread position:
               
330-638
               

               
Cow position:
               
chr29:31594676-31594371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
330-650
               

               
Cow position:
               
chr29:40300577-40300257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
330-663
               

               
Cow position:
               
chr29:11365639-11365980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 75
               

               
Conread position:
               
330-680
               

               
Cow position:
               
chr29:33009170-33009520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 135
               

               
Conread position:
               
330-682
               

               
Cow position:
               
chr29:19596863-19596507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
231, 26
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr29:6879312-6878945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 193
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr29:13646155-13645792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr29:17794802-17795176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr29:23239904-23240269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 216
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr29:45462854-45463214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 0
               

               
Conread position:
               
331-456
               

               
Cow position:
               
chr29:34737081-34736957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
331-685
               

               
Cow position:
               
chr29:26764829-26765180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
331-686
               

               
Cow position:
               
chr29:42807604-42807955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 225
               

               
Conread position:
               
331-693
               

               
Cow position:
               
chr29:36193283-36192915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 103
               

               
Conread position:
               
332-696
               

               
Cow position:
               
chr29:19755833-19756204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 333
               

               
Conread position:
               
333-475
               

               
Cow position:
               
chr29:34794232-34794090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
333-493
               

               
Cow position:
               
chr29:30028781-30028939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
333-511
               

               
Cow position:
               
chr29:24420818-24420996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
333-512
               

               
Cow position:
               
chr29:26128880-26128702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
333-521
               

               
Cow position:
               
chr29:6635228-6635407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
333-523
               

               
Cow position:
               
chr29:2532490-2532668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
333-534
               

               
Cow position:
               
chr29:15919010-15919204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
333-540
               

               
Cow position:
               
chr29:29550141-29550344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
333-544
               

               
Cow position:
               
chr29:32216754-32216544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
333-547
               

               
Cow position:
               
chr29:3169064-3168851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
147, 82
               

               
Conread position:
               
333-547
               

               
Cow position:
               
chr29:11121616-11121824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
333-552
               

               
Cow position:
               
chr29:4490118-4490331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
333-643
               

               
Cow position:
               
chr29:11633975-11634279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
66, 71
               

               
Conread position:
               
333-643
               

               
Cow position:
               
chr29:18879273-18878965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
333-645
               

               
Cow position:
               
chr29:20615340-20615646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
333-648
               

               
Cow position:
               
chr29:33599712-33599397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
333-653
               

               
Cow position:
               
chr29:19547493-19547172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
333-660
               

               
Cow position:
               
chr29:13634938-13634603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 99
               

               
Conread position:
               
333-662
               

               
Cow position:
               
chr29:16662446-16662778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
224, 31
               

               
Conread position:
               
333-664
               

               
Cow position:
               
chr29:12292883-12292554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
215, 41
               

               
Conread position:
               
333-677
               

               
Cow position:
               
chr29:8070161-8070506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
130, 169
               

               
Conread position:
               
333-678
               

               
Cow position:
               
chr29:11588652-11588997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 10
               

               
Conread position:
               
333-680
               

               
Cow position:
               
chr29:629028-629367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
333-684
               

               
Cow position:
               
chr29:8667206-8667556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 289
               

               
Conread position:
               
333-690
               

               
Cow position:
               
chr29:29565713-29565357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 138
               

               
Conread position:
               
333-692
               

               
Cow position:
               
chr29:33549751-33549380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
333-693
               

               
Cow position:
               
chr29:5311132-5310761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 152
               

               
Conread position:
               
333-693
               

               
Cow position:
               
chr29:37302310-37301953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
224, 32
               

               
Conread position:
               
333-694
               

               
Cow position:
               
chr29:1479077-1479437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 157
               

               
Conread position:
               
333-695
               

               
Cow position:
               
chr29:41113453-41113088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 101
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:757009-756647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 82
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:5238111-5238474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 330
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:5241021-5241384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 330
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:10841866-10841492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:14116437-14116798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 158
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:14372885-14372518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 99
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:16035770-16035409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 19
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:20593357-20593720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 325
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:24952059-24952442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 27
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:25423230-25423580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 203
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:26994649-26995020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
162, 36
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:27007520-27007874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
144, 36
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:28656747-28656386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 71
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:32317491-32317847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 37
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:32516119-32516481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 297
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:38271629-38271996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 329
               

               
Conread position:
               
333-696
               

               
Cow position:
               
chr29:38409822-38410185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 325
               

               
Conread position:
               
334-492
               

               
Cow position:
               
chr29:5786121-5786279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
334-498
               

               
Cow position:
               
chr29:16169686-16169522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
334-594
               

               
Cow position:
               
chr29:10237034-10236773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 250
               

               
Conread position:
               
334-615
               

               
Cow position:
               
chr29:32175884-32176160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 0
               

               
Conread position:
               
334-653
               

               
Cow position:
               
chr29:23154613-23154939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 128
               

               
Conread position:
               
334-679
               

               
Cow position:
               
chr29:7960134-7959783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
334-694
               

               
Cow position:
               
chr29:9332544-9332898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
334-696
               

               
Cow position:
               
chr29:15738951-15738588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
334-696
               

               
Cow position:
               
chr29:27710758-27710391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
335-471
               

               
Cow position:
               
chr29:19946552-19946416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
335-670
               

               
Cow position:
               
chr29:44379231-44378898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
335-696
               

               
Cow position:
               
chr29:528892-528534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 110
               

               
Conread position:
               
335-696
               

               
Cow position:
               
chr29:4875510-4875147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 330
               

               
Conread position:
               
336-696
               

               
Cow position:
               
chr29:686795-686435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 327
               

               
Conread position:
               
337-696
               

               
Cow position:
               
chr29:15936865-15936507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 270
               

               
Conread position:
               
337-696
               

               
Cow position:
               
chr29:45626964-45627317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
214, 13
               

               
Conread position:
               
338-693
               

               
Cow position:
               
chr29:36401787-36402130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 135
               

               
Conread position:
               
343-471
               

               
Cow position:
               
chr29:43320840-43320968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-475
               

               
Cow position:
               
chr29:13044045-13043913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-479
               

               
Cow position:
               
chr29:32543774-32543910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-511
               

               
Cow position:
               
chr29:34298468-34298303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
343-515
               

               
Cow position:
               
chr29:9939164-9938996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
343-545
               

               
Cow position:
               
chr29:11786638-11786834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
343-592
               

               
Cow position:
               
chr29:37451714-37451967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
343-630
               

               
Cow position:
               
chr29:7860038-7860331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
343-633
               

               
Cow position:
               
chr29:27310050-27309757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
56, 61
               

               
Conread position:
               
343-656
               

               
Cow position:
               
chr29:40762507-40762822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
208, 51
               

               
Conread position:
               
343-660
               

               
Cow position:
               
chr29:23753807-23753488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 284
               

               
Conread position:
               
343-662
               

               
Cow position:
               
chr29:7664358-7664042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 68
               

               
Conread position:
               
343-663
               

               
Cow position:
               
chr29:27858219-27858536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 71
               

               
Conread position:
               
343-664
               

               
Cow position:
               
chr29:14853974-14853646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
268, 36
               

               
Conread position:
               
343-664
               

               
Cow position:
               
chr29:29615517-29615194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
343-670
               

               
Cow position:
               
chr29:4220794-4221115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
182, 72
               

               
Conread position:
               
343-680
               

               
Cow position:
               
chr29:3487397-3487718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
343-681
               

               
Cow position:
               
chr29:29701571-29701238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 20
               

               
Conread position:
               
343-682
               

               
Cow position:
               
chr29:2188946-2188605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 233
               

               
Conread position:
               
343-682
               

               
Cow position:
               
chr29:4891199-4890858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
133, 142
               

               
Conread position:
               
343-682
               

               
Cow position:
               
chr29:14050806-14050472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 92
               

               
Conread position:
               
343-690
               

               
Cow position:
               
chr29:15902889-15902543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 229
               

               
Conread position:
               
343-690
               

               
Cow position:
               
chr29:19852535-19852193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
343-690
               

               
Cow position:
               
chr29:44607771-44607423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
343-692
               

               
Cow position:
               
chr29:39532115-39531774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 28
               

               
Conread position:
               
343-695
               

               
Cow position:
               
chr29:22634752-22635098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
205, 65
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr29:3584722-3584369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 209
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr29:11684406-11684768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 31
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr29:15289137-15289496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 46
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr29:26161194-26160844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 0
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr29:36530265-36530619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
344-503
               

               
Cow position:
               
chr29:10849760-10849598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
344-544
               

               
Cow position:
               
chr29:40732848-40732649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
344-617
               

               
Cow position:
               
chr29:17135180-17135456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
206, 145
               

               
Conread position:
               
344-629
               

               
Cow position:
               
chr29:7605038-7605321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 107
               

               
Conread position:
               
344-663
               

               
Cow position:
               
chr29:8512626-8512946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
188, 49
               

               
Conread position:
               
344-682
               

               
Cow position:
               
chr29:21535287-21534946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 265
               

               
Conread position:
               
344-696
               

               
Cow position:
               
chr29:1613169-1612817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
344-696
               

               
Cow position:
               
chr29:27833383-27833743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 95
               

               
Conread position:
               
345-512
               

               
Cow position:
               
chr29:32913480-32913313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 137
               

               
Conread position:
               
345-516
               

               
Cow position:
               
chr29:2686424-2686595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
345-639
               

               
Cow position:
               
chr29:3047170-3046869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
345-660
               

               
Cow position:
               
chr29:6150662-6150341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
345-682
               

               
Cow position:
               
chr29:23988198-23988539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
345-696
               

               
Cow position:
               
chr29:3330220-3330571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 313
               

               
Conread position:
               
345-696
               

               
Cow position:
               
chr29:4480757-4480416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 155
               

               
Conread position:
               
345-696
               

               
Cow position:
               
chr29:7866155-7865807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 147
               

               
Conread position:
               
345-696
               

               
Cow position:
               
chr29:29056586-29056940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 73
               

               
Conread position:
               
346-690
               

               
Cow position:
               
chr29:34754682-34755045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
196, 126
               

               
Conread position:
               
346-695
               

               
Cow position:
               
chr29:28776049-28775699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 117
               

               
Conread position:
               
346-696
               

               
Cow position:
               
chr29:19761681-19762028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
349-553
               

               
Cow position:
               
chr29:25478784-25478987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 135
               

               
Conread position:
               
349-663
               

               
Cow position:
               
chr29:18693683-18693383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 142
               

               
Conread position:
               
349-684
               

               
Cow position:
               
chr29:18025830-18026169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 107
               

               
Conread position:
               
349-696
               

               
Cow position:
               
chr29:133596-133948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
200, 39
               

               
Conread position:
               
349-696
               

               
Cow position:
               
chr29:3574956-3574611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 37
               

               
Conread position:
               
349-696
               

               
Cow position:
               
chr29:13107749-13108094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 141
               

               
Conread position:
               
349-696
               

               
Cow position:
               
chr29:19400230-19400573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
208, 221
               

               
Conread position:
               
349-696
               

               
Cow position:
               
chr29:26778298-26778640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
350-546
               

               
Cow position:
               
chr29:22280229-22280425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-671
               

               
Cow position:
               
chr29:10802234-10801929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
350-696
               

               
Cow position:
               
chr29:1956680-1956333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 242
               

               
Conread position:
               
351-555
               

               
Cow position:
               
chr29:21546109-21545908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
351-624
               

               
Cow position:
               
chr29:18022215-18021939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
6, 44
               

               
Conread position:
               
351-692
               

               
Cow position:
               
chr29:36242747-36243094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
352-691
               

               
Cow position:
               
chr29:9911568-9911912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 164
               

               
Conread position:
               
353-512
               

               
Cow position:
               
chr29:21286485-21286642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
353-611
               

               
Cow position:
               
chr29:13616240-13615986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
353-617
               

               
Cow position:
               
chr29:26334970-26334708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
353-662
               

               
Cow position:
               
chr29:17300557-17300878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
109, 5
               

               
Conread position:
               
353-690
               

               
Cow position:
               
chr29:6261901-6261570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 204
               

               
Conread position:
               
353-695
               

               
Cow position:
               
chr29:2415391-2415056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
353-696
               

               
Cow position:
               
chr29:16186025-16185679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 308
               

               
Conread position:
               
353-696
               

               
Cow position:
               
chr29:22935701-22936037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 80
               

               
Conread position:
               
353-696
               

               
Cow position:
               
chr29:24623672-24623997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 87
               

               
Conread position:
               
353-696
               

               
Cow position:
               
chr29:29065842-29066182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 77
               

               
Conread position:
               
354-663
               

               
Cow position:
               
chr29:17153895-17154208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
354-696
               

               
Cow position:
               
chr29:29477601-29477276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
355-695
               

               
Cow position:
               
chr29:45006201-45005861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 310
               

               
Conread position:
               
355-696
               

               
Cow position:
               
chr29:28578788-28579129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 300
               

               
Conread position:
               
355-696
               

               
Cow position:
               
chr29:33101667-33102017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
356-666
               

               
Cow position:
               
chr29:4260781-4261101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
356-677
               

               
Cow position:
               
chr29:254469-254796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
356-693
               

               
Cow position:
               
chr29:26458433-26458093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
356-696
               

               
Cow position:
               
chr29:12898207-12898547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 302
               

               
Conread position:
               
357-696
               

               
Cow position:
               
chr29:5935609-5935948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 301
               

               
Conread position:
               
358-638
               

               
Cow position:
               
chr29:7290334-7290606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
358-696
               

               
Cow position:
               
chr29:7799227-7799572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 162
               

               
Conread position:
               
358-696
               

               
Cow position:
               
chr29:9717070-9717408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
359-628
               

               
Cow position:
               
chr29:11972701-11972974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
189, 90
               

               
Conread position:
               
359-664
               

               
Cow position:
               
chr29:35112657-35112347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
359-680
               

               
Cow position:
               
chr29:29547682-29547986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
359-696
               

               
Cow position:
               
chr29:18300137-18300474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 299
               

               
Conread position:
               
360-468
               

               
Cow position:
               
chr29:18283192-18283084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
362-555
               

               
Cow position:
               
chr29:24080344-24080538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
362-657
               

               
Cow position:
               
chr29:32572811-32573108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
222, 174
               

               
Conread position:
               
362-664
               

               
Cow position:
               
chr29:22339805-22339492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
362-677
               

               
Cow position:
               
chr29:19338383-19338697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
362-696
               

               
Cow position:
               
chr29:40096389-40096721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 15
               

               
Conread position:
               
363-696
               

               
Cow position:
               
chr29:2308702-2309036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 301
               

               
Conread position:
               
363-696
               

               
Cow position:
               
chr29:24659675-24659348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
364-678
               

               
Cow position:
               
chr29:18084999-18085314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 0
               

               
Conread position:
               
365-610
               

               
Cow position:
               
chr29:8142937-8143178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
168, 125
               

               
Conread position:
               
365-660
               

               
Cow position:
               
chr29:3501811-3502114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 215
               

               
Conread position:
               
366-695
               

               
Cow position:
               
chr29:11136461-11136133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
366-696
               

               
Cow position:
               
chr29:44067-43737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 297
               

               
Conread position:
               
366-696
               

               
Cow position:
               
chr29:26216578-26216913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
203, 120
               

               
Conread position:
               
367-663
               

               
Cow position:
               
chr29:7654788-7654495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
367-674
               

               
Cow position:
               
chr29:4057936-4058247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 22
               

               
Conread position:
               
368-657
               

               
Cow position:
               
chr29:42939908-42939616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
370-694
               

               
Cow position:
               
chr29:24260383-24260083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
371-520
               

               
Cow position:
               
chr29:23142774-23142924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
371-556
               

               
Cow position:
               
chr29:23542307-23542124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
371-578
               

               
Cow position:
               
chr29:34429796-34430003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
371-678
               

               
Cow position:
               
chr29:18012042-18012337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
371-680
               

               
Cow position:
               
chr29:6332984-6333287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 129
               

               
Conread position:
               
371-680
               

               
Cow position:
               
chr29:34535800-34535487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
371-682
               

               
Cow position:
               
chr29:19792832-19792527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 15
               

               
Conread position:
               
371-692
               

               
Cow position:
               
chr29:6334223-6334536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr29:11703454-11703779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 287
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr29:13127674-13127352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
301, 151
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr29:19428098-19428424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 293
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr29:20213225-20213549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 119
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr29:20429526-20429217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr29:30193688-30193360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
176, 47
               

               
Conread position:
               
371-696
               

               
Cow position:
               
chr29:43692390-43692713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 44
               

               
Conread position:
               
374-605
               

               
Cow position:
               
chr29:28281333-28281091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
374-657
               

               
Cow position:
               
chr29:16051699-16051408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
374-691
               

               
Cow position:
               
chr29:18364974-18364655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 274
               

               
Conread position:
               
374-693
               

               
Cow position:
               
chr29:10819237-10818908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 269
               

               
Conread position:
               
374-696
               

               
Cow position:
               
chr29:2298670-2298352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
152, 116
               

               
Conread position:
               
374-696
               

               
Cow position:
               
chr29:6455312-6455634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 284
               

               
Conread position:
               
374-696
               

               
Cow position:
               
chr29:16067019-16067341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 284
               

               
Conread position:
               
374-696
               

               
Cow position:
               
chr29:27928230-27927908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 284
               

               
Conread position:
               
374-696
               

               
Cow position:
               
chr29:35264701-35264379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 285
               

               
Conread position:
               
375-678
               

               
Cow position:
               
chr29:23348789-23348489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
377-657
               

               
Cow position:
               
chr29:39293433-39293148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
379-684
               

               
Cow position:
               
chr29:3822297-3822600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
380-682
               

               
Cow position:
               
chr29:13458437-13458738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 53
               

               
Conread position:
               
380-696
               

               
Cow position:
               
chr29:37719350-37719668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 57
               

               
Conread position:
               
381-696
               

               
Cow position:
               
chr29:15116854-15116538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
382-661
               

               
Cow position:
               
chr29:45820797-45820526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
382-678
               

               
Cow position:
               
chr29:41850361-41850083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
382-690
               

               
Cow position:
               
chr29:28955126-28955444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
176, 297
               

               
Conread position:
               
382-696
               

               
Cow position:
               
chr29:7697550-7697869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
382-696
               

               
Cow position:
               
chr29:12875843-12876159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
176, 18
               

               
Conread position:
               
382-696
               

               
Cow position:
               
chr29:13093567-13093887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 243
               

               
Conread position:
               
382-696
               

               
Cow position:
               
chr29:20933155-20933461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 108
               

               
Conread position:
               
383-696
               

               
Cow position:
               
chr29:22121819-22122136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 105
               

               
Conread position:
               
383-696
               

               
Cow position:
               
chr29:40609942-40609621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
384-542
               

               
Cow position:
               
chr29:10626852-10627010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
385-696
               

               
Cow position:
               
chr29:20055089-20055400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 273
               

               
Conread position:
               
386-621
               

               
Cow position:
               
chr29:2639378-2639138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
386-655
               

               
Cow position:
               
chr29:18360652-18360390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
386-693
               

               
Cow position:
               
chr29:18561350-18561044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 32
               

               
Conread position:
               
386-696
               

               
Cow position:
               
chr29:457600-457290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 99
               

               
Conread position:
               
386-696
               

               
Cow position:
               
chr29:1688413-1688723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 272
               

               
Conread position:
               
386-696
               

               
Cow position:
               
chr29:4620623-4620933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 272
               

               
Conread position:
               
386-696
               

               
Cow position:
               
chr29:16382301-16382610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 104
               

               
Conread position:
               
386-696
               

               
Cow position:
               
chr29:33520537-33520234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
387-696
               

               
Cow position:
               
chr29:3973092-3972795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
284, 11
               

               
Conread position:
               
389-666
               

               
Cow position:
               
chr29:1021717-1021994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
389-693
               

               
Cow position:
               
chr29:21592163-21592457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 22
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr29:10122655-10122349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 123
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr29:43500018-43499711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 274
               

               
Conread position:
               
391-666
               

               
Cow position:
               
chr29:9137746-9138028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
392-660
               

               
Cow position:
               
chr29:2984308-2984575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 191
               

               
Conread position:
               
392-696
               

               
Cow position:
               
chr29:26987017-26987320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 29
               

               
Conread position:
               
393-544
               

               
Cow position:
               
chr29:32708663-32708512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
395-682
               

               
Cow position:
               
chr29:799043-798745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
395-696
               

               
Cow position:
               
chr29:5977650-5977365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
395-696
               

               
Cow position:
               
chr29:9801158-9801461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
397-690
               

               
Cow position:
               
chr29:4218130-4218415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
152, 8
               

               
Conread position:
               
397-696
               

               
Cow position:
               
chr29:35291565-35291855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 18
               

               
Conread position:
               
398-692
               

               
Cow position:
               
chr29:3549220-3549518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
399-696
               

               
Cow position:
               
chr29:39567146-39567444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
404-544
               

               
Cow position:
               
chr29:11526245-11526105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
404-614
               

               
Cow position:
               
chr29:24966893-24966685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
404-663
               

               
Cow position:
               
chr29:21626982-21627248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
142, 190
               

               
Conread position:
               
404-689
               

               
Cow position:
               
chr29:18720534-18720247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 115
               

               
Conread position:
               
404-696
               

               
Cow position:
               
chr29:5948331-5948031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
404-696
               

               
Cow position:
               
chr29:30708084-30707792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 254
               

               
Conread position:
               
405-549
               

               
Cow position:
               
chr29:17089652-17089510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
406-696
               

               
Cow position:
               
chr29:11696914-11697204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 252
               

               
Conread position:
               
406-696
               

               
Cow position:
               
chr29:20233653-20233933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
407-696
               

               
Cow position:
               
chr29:16785377-16785666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 251
               

               
Conread position:
               
408-639
               

               
Cow position:
               
chr29:7748092-7747860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
160, 59
               

               
Conread position:
               
408-682
               

               
Cow position:
               
chr29:15756872-15757150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
152, 94
               

               
Conread position:
               
409-693
               

               
Cow position:
               
chr29:15401286-15401003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 26
               

               
Conread position:
               
409-694
               

               
Cow position:
               
chr29:40764200-40763920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
410-690
               

               
Cow position:
               
chr29:40137646-40137368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 89
               

               
Conread position:
               
411-696
               

               
Cow position:
               
chr29:7953533-7953818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
260, 247
               

               
Conread position:
               
411-696
               

               
Cow position:
               
chr29:32870703-32870992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
138, 49
               

               
Conread position:
               
412-682
               

               
Cow position:
               
chr29:29771013-29770742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 29
               

               
Conread position:
               
412-686
               

               
Cow position:
               
chr29:17667965-17668252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
149, 264
               

               
Conread position:
               
412-696
               

               
Cow position:
               
chr29:1324911-1325197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 72
               

               
Conread position:
               
412-696
               

               
Cow position:
               
chr29:43009640-43009354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
97, 115
               

               
Conread position:
               
413-696
               

               
Cow position:
               
chr29:3704709-3704447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
258, 113
               

               
Conread position:
               
414-664
               

               
Cow position:
               
chr29:34957030-34957283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 90
               

               
Conread position:
               
414-696
               

               
Cow position:
               
chr29:26130268-26130539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
414-696
               

               
Cow position:
               
chr29:44902228-44901946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 249
               

               
Conread position:
               
415-696
               

               
Cow position:
               
chr29:20594522-20594793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 196
               

               
Conread position:
               
416-545
               

               
Cow position:
               
chr29:26616464-26616335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-653
               

               
Cow position:
               
chr29:21933657-21933414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
135, 241
               

               
Conread position:
               
416-670
               

               
Cow position:
               
chr29:38933154-38932896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
132, 5
               

               
Conread position:
               
416-695
               

               
Cow position:
               
chr29:31786163-31786433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
249, 84
               

               
Conread position:
               
417-663
               

               
Cow position:
               
chr29:2463225-2462986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
417-693
               

               
Cow position:
               
chr29:20625473-20625749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
418-682
               

               
Cow position:
               
chr29:31943324-31943586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
419-696
               

               
Cow position:
               
chr29:18751945-18752222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
252, 239
               

               
Conread position:
               
426-660
               

               
Cow position:
               
chr29:21665461-21665695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
426-696
               

               
Cow position:
               
chr29:732119-732378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
427-687
               

               
Cow position:
               
chr29:25837238-25836974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
50, 243
               

               
Conread position:
               
427-693
               

               
Cow position:
               
chr29:37307542-37307272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 12
               

               
Conread position:
               
427-695
               

               
Cow position:
               
chr29:12901614-12901353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 121
               

               
Conread position:
               
427-695
               

               
Cow position:
               
chr29:32290090-32290357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 71
               

               
Conread position:
               
427-696
               

               
Cow position:
               
chr29:18749095-18748828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 237
               

               
Conread position:
               
428-696
               

               
Cow position:
               
chr29:16152298-16152565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 180
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr29:1029535-1029787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
429-682
               

               
Cow position:
               
chr29:24730785-24730540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
236, 27
               

               
Conread position:
               
429-696
               

               
Cow position:
               
chr29:8190983-8190723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 58
               

               
Conread position:
               
429-696
               

               
Cow position:
               
chr29:14610967-14611234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 229
               

               
Conread position:
               
429-696
               

               
Cow position:
               
chr29:15576568-15576302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
243, 20
               

               
Conread position:
               
430-624
               

               
Cow position:
               
chr29:43371963-43371769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
430-677
               

               
Cow position:
               
chr29:34878113-34878371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
430-693
               

               
Cow position:
               
chr29:36586067-36586335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 213
               

               
Conread position:
               
433-552
               

               
Cow position:
               
chr29:44136189-44136070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
433-576
               

               
Cow position:
               
chr29:478616-478759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
433-685
               

               
Cow position:
               
chr29:4164531-4164782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 225
               

               
Conread position:
               
433-696
               

               
Cow position:
               
chr29:19925260-19924997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 225
               

               
Conread position:
               
433-696
               

               
Cow position:
               
chr29:36007888-36008150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 7
               

               
Conread position:
               
434-682
               

               
Cow position:
               
chr29:477558-477805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
92, 81
               

               
Conread position:
               
434-693
               

               
Cow position:
               
chr29:34774369-34774110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 229
               

               
Conread position:
               
434-696
               

               
Cow position:
               
chr29:87518-87261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
237, 86
               

               
Conread position:
               
435-696
               

               
Cow position:
               
chr29:25775552-25775288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
435-696
               

               
Cow position:
               
chr29:40338044-40337768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
436-696
               

               
Cow position:
               
chr29:16501380-16501641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 228
               

               
Conread position:
               
438-677
               

               
Cow position:
               
chr29:37600396-37600153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
438-682
               

               
Cow position:
               
chr29:4692318-4692072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
440-690
               

               
Cow position:
               
chr29:42406172-42406413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
231, 63
               

               
Conread position:
               
440-694
               

               
Cow position:
               
chr29:465898-465648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
440-696
               

               
Cow position:
               
chr29:36428785-36428535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
231, 196
               

               
Conread position:
               
440-696
               

               
Cow position:
               
chr29:44233438-44233193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
230, 36
               

               
Conread position:
               
441-672
               

               
Cow position:
               
chr29:12222173-12221946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
441-684
               

               
Cow position:
               
chr29:10225530-10225284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
119, 227
               

               
Conread position:
               
441-695
               

               
Cow position:
               
chr29:34734681-34734428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 149
               

               
Conread position:
               
441-696
               

               
Cow position:
               
chr29:6775484-6775234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
224, 182
               

               
Conread position:
               
441-696
               

               
Cow position:
               
chr29:34551953-34552208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 230
               

               
Conread position:
               
445-677
               

               
Cow position:
               
chr29:32808928-32809164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
102, 137
               

               
Conread position:
               
445-696
               

               
Cow position:
               
chr29:2374498-2374247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
227, 214
               

               
Conread position:
               
445-696
               

               
Cow position:
               
chr29:38910504-38910248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 223
               

               
Conread position:
               
446-696
               

               
Cow position:
               
chr29:1911905-1911655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 212
               

               
Conread position:
               
446-696
               

               
Cow position:
               
chr29:22949163-22948906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
102, 132
               

               
Conread position:
               
446-696
               

               
Cow position:
               
chr29:24121351-24121103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
225, 44
               

               
Conread position:
               
446-696
               

               
Cow position:
               
chr29:32800196-32799947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
225, 40
               

               
Conread position:
               
447-685
               

               
Cow position:
               
chr29:29620124-29619879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
447-696
               

               
Cow position:
               
chr29:41812066-41811821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
448-696
               

               
Cow position:
               
chr29:2483733-2483486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
450-696
               

               
Cow position:
               
chr29:24013244-24013490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 208
               

               
Conread position:
               
452-696
               

               
Cow position:
               
chr29:27694193-27693951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
230, 32
               

               
Conread position:
               
453-696
               

               
Cow position:
               
chr29:26633778-26633535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
219, 204
               

               
Conread position:
               
455-633
               

               
Cow position:
               
chr29:5062672-5062850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
455-655
               

               
Cow position:
               
chr29:5233118-5233310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
457-696
               

               
Cow position:
               
chr29:4084584-4084822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
90, 169
               

               
Conread position:
               
458-597
               

               
Cow position:
               
chr29:22162770-22162631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
460-688
               

               
Cow position:
               
chr29:42709255-42709027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
211, 203
               

               
Conread position:
               
461-659
               

               
Cow position:
               
chr29:6648787-6648984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
461-664
               

               
Cow position:
               
chr29:355470-355663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 97
               

               
Conread position:
               
461-682
               

               
Cow position:
               
chr29:20539226-20538998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
461-695
               

               
Cow position:
               
chr29:36299450-36299689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 177
               

               
Conread position:
               
461-696
               

               
Cow position:
               
chr29:6774317-6774082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
210, 197
               

               
Conread position:
               
461-696
               

               
Cow position:
               
chr29:18963254-18963496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
461-696
               

               
Cow position:
               
chr29:38261737-38261502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
211, 198
               

               
Conread position:
               
461-696
               

               
Cow position:
               
chr29:40014176-40013944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
463-654
               

               
Cow position:
               
chr29:36109800-36109601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
463-682
               

               
Cow position:
               
chr29:30545487-30545270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
464-580
               

               
Cow position:
               
chr29:43321097-43321213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
464-663
               

               
Cow position:
               
chr29:13848413-13848213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
464-694
               

               
Cow position:
               
chr29:4537584-4537820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 208
               

               
Conread position:
               
464-695
               

               
Cow position:
               
chr29:10674539-10674769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
464-696
               

               
Cow position:
               
chr29:1934036-1933802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
202, 0
               

               
Conread position:
               
464-696
               

               
Cow position:
               
chr29:22560447-22560209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
465-696
               

               
Cow position:
               
chr29:21209691-21209922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
206, 193
               

               
Conread position:
               
465-696
               

               
Cow position:
               
chr29:36216646-36216874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
467-690
               

               
Cow position:
               
chr29:13041032-13040807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 153
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr29:2136576-2136343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 199
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr29:21475210-21475437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
202, 189
               

               
Conread position:
               
470-696
               

               
Cow position:
               
chr29:28621742-28621515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
107, 211
               

               
Conread position:
               
470-696
               

               
Cow position:
               
chr29:34793807-34793578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
471-696
               

               
Cow position:
               
chr29:17561-17349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
201, 94
               

               
Conread position:
               
472-681
               

               
Cow position:
               
chr29:20923332-20923117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
477-696
               

               
Cow position:
               
chr29:16612421-16612198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 167
               

               
Conread position:
               
478-662
               

               
Cow position:
               
chr29:34736915-34736722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
479-657
               

               
Cow position:
               
chr29:2145368-2145190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
479-682
               

               
Cow position:
               
chr29:11309174-11308972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
481-690
               

               
Cow position:
               
chr29:5952427-5952214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
481-696
               

               
Cow position:
               
chr29:23449060-23448845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
190, 177
               

               
Conread position:
               
484-682
               

               
Cow position:
               
chr29:2544070-2544268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
188, 179
               

               
Conread position:
               
484-696
               

               
Cow position:
               
chr29:12674686-12674897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
484-696
               

               
Cow position:
               
chr29:32942777-32942987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
187, 27
               

               
Conread position:
               
484-696
               

               
Cow position:
               
chr29:37618711-37618923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
485-680
               

               
Cow position:
               
chr29:6771525-6771727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
485-693
               

               
Cow position:
               
chr29:16168491-16168284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
485-696
               

               
Cow position:
               
chr29:9861321-9861113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
186, 5
               

               
Conread position:
               
486-696
               

               
Cow position:
               
chr29:17606963-17607172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
185, 17
               

               
Conread position:
               
487-692
               

               
Cow position:
               
chr29:43495617-43495816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
488-696
               

               
Cow position:
               
chr29:26915728-26915935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
490-663
               

               
Cow position:
               
chr29:6755534-6755367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
490-688
               

               
Cow position:
               
chr29:868344-868548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
490-693
               

               
Cow position:
               
chr29:29302481-29302274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 182
               

               
Conread position:
               
490-696
               

               
Cow position:
               
chr29:11321798-11321598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
94, 165
               

               
Conread position:
               
490-696
               

               
Cow position:
               
chr29:16109908-16110114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
181, 168
               

               
Conread position:
               
491-693
               

               
Cow position:
               
chr29:4103638-4103430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
491-696
               

               
Cow position:
               
chr29:12309550-12309753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
174, 95
               

               
Conread position:
               
491-696
               

               
Cow position:
               
chr29:39108893-39108686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
492-696
               

               
Cow position:
               
chr29:5786480-5786684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
179, 166
               

               
Conread position:
               
492-696
               

               
Cow position:
               
chr29:12570989-12571193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
179, 166
               

               
Conread position:
               
492-696
               

               
Cow position:
               
chr29:15808527-15808732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
149, 167
               

               
Conread position:
               
493-670
               

               
Cow position:
               
chr29:12956773-12956591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
493-694
               

               
Cow position:
               
chr29:23119821-23119623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
493-696
               

               
Cow position:
               
chr29:27588245-27588441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
494-696
               

               
Cow position:
               
chr29:42821340-42821537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
495-679
               

               
Cow position:
               
chr29:26415564-26415753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 177
               

               
Conread position:
               
497-696
               

               
Cow position:
               
chr29:7560844-7560645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
8, 12
               

               
Conread position:
               
500-662
               

               
Cow position:
               
chr29:1332644-1332484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
500-696
               

               
Cow position:
               
chr29:21197091-21196894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
501-680
               

               
Cow position:
               
chr29:20903858-20903678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
502-673
               

               
Cow position:
               
chr29:11915096-11915269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
502-682
               

               
Cow position:
               
chr29:5109718-5109538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
169, 161
               

               
Conread position:
               
502-682
               

               
Cow position:
               
chr29:27835783-27835964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
163, 68
               

               
Conread position:
               
502-688
               

               
Cow position:
               
chr29:21428021-21427835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
169, 156
               

               
Conread position:
               
502-688
               

               
Cow position:
               
chr29:34298186-34298003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
502-696
               

               
Cow position:
               
chr29:4524422-4524613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
503-663
               

               
Cow position:
               
chr29:26128474-26128309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
505-696
               

               
Cow position:
               
chr29:13876623-13876432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
166, 153
               

               
Conread position:
               
506-688
               

               
Cow position:
               
chr29:23112926-23113108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
165, 148
               

               
Conread position:
               
506-695
               

               
Cow position:
               
chr29:21528871-21529054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
506-696
               

               
Cow position:
               
chr29:9864304-9864507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
506-696
               

               
Cow position:
               
chr29:24616199-24616389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
165, 152
               

               
Conread position:
               
506-696
               

               
Cow position:
               
chr29:26450065-26449875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
165, 152
               

               
Conread position:
               
507-644
               

               
Cow position:
               
chr29:6286800-6286663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
507-682
               

               
Cow position:
               
chr29:2263499-2263324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
170, 130
               

               
Conread position:
               
507-689
               

               
Cow position:
               
chr29:11798722-11798910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 161
               

               
Conread position:
               
508-633
               

               
Cow position:
               
chr29:6217993-6217861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
508-690
               

               
Cow position:
               
chr29:19659623-19659805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
163, 155
               

               
Conread position:
               
508-695
               

               
Cow position:
               
chr29:32308754-32308569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
508-696
               

               
Cow position:
               
chr29:903500-903688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
508-696
               

               
Cow position:
               
chr29:8110287-8110107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
508-696
               

               
Cow position:
               
chr29:16209580-16209393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
508-696
               

               
Cow position:
               
chr29:19398751-19398939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
163, 155
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr29:25088303-25088479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr29:41183170-41182997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
509-695
               

               
Cow position:
               
chr29:21287305-21287489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 110
               

               
Conread position:
               
509-696
               

               
Cow position:
               
chr29:8935054-8935242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
509-696
               

               
Cow position:
               
chr29:9977492-9977305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
162, 149
               

               
Conread position:
               
509-696
               

               
Cow position:
               
chr29:28113692-28113508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 133
               

               
Conread position:
               
509-696
               

               
Cow position:
               
chr29:32543919-32544106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
162, 154
               

               
Conread position:
               
509-696
               

               
Cow position:
               
chr29:42253942-42253755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
163, 152
               

               
Conread position:
               
512-644
               

               
Cow position:
               
chr29:35406213-35406081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
512-696
               

               
Cow position:
               
chr29:18724183-18724000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
159, 72
               

               
Conread position:
               
512-696
               

               
Cow position:
               
chr29:40306428-40306244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
160, 147
               

               
Conread position:
               
513-691
               

               
Cow position:
               
chr29:6635677-6635855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
158, 150
               

               
Conread position:
               
513-695
               

               
Cow position:
               
chr29:12189564-12189382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
159, 146
               

               
Conread position:
               
514-696
               

               
Cow position:
               
chr29:13903466-13903284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
158, 145
               

               
Conread position:
               
514-696
               

               
Cow position:
               
chr29:35281077-35281259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
157, 149
               

               
Conread position:
               
515-696
               

               
Cow position:
               
chr29:35455394-35455213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
156, 143
               

               
Conread position:
               
516-696
               

               
Cow position:
               
chr29:3460397-3460577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
156, 139
               

               
Conread position:
               
516-696
               

               
Cow position:
               
chr29:17041227-17041403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
518-690
               

               
Cow position:
               
chr29:26017932-26017761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr29:4649142-4648964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
153, 140
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr29:28689188-28689366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 145
               

               
Conread position:
               
519-696
               

               
Cow position:
               
chr29:42413746-42413923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 139
               

               
Conread position:
               
520-696
               

               
Cow position:
               
chr29:2484875-2485051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
151, 138
               

               
Conread position:
               
520-696
               

               
Cow position:
               
chr29:5138813-5138989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
151, 138
               

               
Conread position:
               
520-696
               

               
Cow position:
               
chr29:37485971-37486147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
151, 138
               

               
Conread position:
               
521-663
               

               
Cow position:
               
chr29:11072113-11071965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
522-696
               

               
Cow position:
               
chr29:17543031-17543206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
523-696
               

               
Cow position:
               
chr29:12610912-12611085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
148, 135
               

               
Conread position:
               
523-696
               

               
Cow position:
               
chr29:25824531-25824703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
148, 135
               

               
Conread position:
               
529-696
               

               
Cow position:
               
chr29:8126005-8125837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
533-693
               

               
Cow position:
               
chr29:32582093-32581933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
139, 126
               

               
Conread position:
               
533-696
               

               
Cow position:
               
chr29:23763510-23763347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 125
               

               
Conread position:
               
534-696
               

               
Cow position:
               
chr29:18773010-18772847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
534-696
               

               
Cow position:
               
chr29:24420548-24420385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
535-696
               

               
Cow position:
               
chr29:13853660-13853821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 123
               

               
Conread position:
               
536-695
               

               
Cow position:
               
chr29:10643299-10643140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
537-695
               

               
Cow position:
               
chr29:28883677-28883835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
538-696
               

               
Cow position:
               
chr29:29632339-29632181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
138, 127
               

               
Conread position:
               
541-696
               

               
Cow position:
               
chr29:35502045-35501892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
547-696
               

               
Cow position:
               
chr29:19124967-19125116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 111
               

               
Conread position:
               
551-695
               

               
Cow position:
               
chr29:31926680-31926535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 115
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:3282318-3282453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 105
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:14888742-14888877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 105
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:15855413-15855548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 97
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:19386041-19386176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 97
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:24304195-24304330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 97
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:24305097-24304962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 98
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:25695692-25695557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:28197387-28197252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
109, 102
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:32349688-32349553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 98
               

               
Conread position:
               
561-696
               

               
Cow position:
               
chr29:35075602-35075467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 97
               

               
Conread position:
               
562-696
               

               
Cow position:
               
chr29:40330394-40330528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
109, 96
               

               
Conread position:
               
563-694
               

               
Cow position:
               
chr29:10200545-10200676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
563-696
               

               
Cow position:
               
chr29:34293546-34293413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
564-696
               

               
Cow position:
               
chr29:16175648-16175515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
565-680
               

               
Cow position:
               
chr29:26470626-26470511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
106, 98
               

               
Conread position:
               
565-694
               

               
Cow position:
               
chr29:2534293-2534422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 93
               

               
Conread position:
               
565-694
               

               
Cow position:
               
chr29:14500698-14500827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 98
               

               
Conread position:
               
565-695
               

               
Cow position:
               
chr29:35484870-35484999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
565-696
               

               
Cow position:
               
chr29:1307238-1307108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
565-696
               

               
Cow position:
               
chr29:11563179-11563047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
566-696
               

               
Cow position:
               
chr29:15828596-15828466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
567-696
               

               
Cow position:
               
chr29:16694051-16694179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
568-696
               

               
Cow position:
               
chr29:18781494-18781622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
571-696
               

               
Cow position:
               
chr29:28503724-28503849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
572-694
               

               
Cow position:
               
chr29:11334864-11334742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 93
               

               
Conread position:
               
572-695
               

               
Cow position:
               
chr29:38581601-38581724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 91
               

               
Conread position:
               
575-696
               

               
Cow position:
               
chr29:24945350-24945229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
578-695
               

               
Cow position:
               
chr29:23874095-23874211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
584-696
               

               
Cow position:
               
chr29:15257860-15257972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
588-696
               

               
Cow position:
               
chr29:39425133-39425241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 70
               
Show alignments to all cow chromosomes.