Cow genome map

Conread name: Ss1.1-Pig3-SRG8018L10.3

Conread position: 283-696
Cow position: chrX:22609221-22608808 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 375

Conread position: 309-683
Cow position: chrX:6906411-6906045 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 25, 38

Conread position: 309-696
Cow position: chrX:10416139-10415742 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 302

Conread position: 310-545
Cow position: chrX:4632625-4632393 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 14, 125

Conread position: 310-695
Cow position: chrX:30133911-30133541 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 78

Conread position: 310-696
Cow position: chrX:15140150-15139761 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 12

Conread position: 311-683
Cow position: chrX:24826734-24827112 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 20

Conread position: 311-694
Cow position: chrX:42086262-42086644 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 11

Conread position: 313-473
Cow position: chrX:21495043-21495203 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 9

Conread position: 313-479
Cow position: chrX:44206364-44206529 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 9

Conread position: 313-524
Cow position: chrX:29722617-29722824 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 9

Conread position: 313-532
Cow position: chrX:25360963-25361181 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-536
Cow position: chrX:43566854-43567077 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 9

Conread position: 313-537
Cow position: chrX:21196423-21196646 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 177, 0

Conread position: 313-544
Cow position: chrX:45400641-45400408 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 171

Conread position: 313-553
Cow position: chrX:9161219-9160980 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-554
Cow position: chrX:27450647-27450405 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 9

Conread position: 313-650
Cow position: chrX:41304337-41304001 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 21, 9

Conread position: 313-654
Cow position: chrX:20953934-20954268 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 9

Conread position: 313-656
Cow position: chrX:24174551-24174205 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 21, 9

Conread position: 313-663
Cow position: chrX:6044089-6043734 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 10

Conread position: 313-680
Cow position: chrX:7512893-7513258 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-682
Cow position: chrX:25436530-25436160 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-682
Cow position: chrX:33493133-33493503 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-682
Cow position: chrX:40279210-40279579 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 9

Conread position: 313-693
Cow position: chrX:32003023-32002644 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 248
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 9

Conread position: 313-696
Cow position: chrX:2664410-2664793 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 345

Conread position: 313-696
Cow position: chrX:5406461-5406842 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-696
Cow position: chrX:7572782-7573163 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-696
Cow position: chrX:7809608-7809219 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 254
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 70

Conread position: 313-696
Cow position: chrX:14801417-14801033 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-696
Cow position: chrX:16279053-16279433 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-696
Cow position: chrX:18950335-18949961 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-696
Cow position: chrX:21343795-21344178 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-696
Cow position: chrX:22556903-22557285 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 20

Conread position: 313-696
Cow position: chrX:24292278-24291898 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-696
Cow position: chrX:27590633-27590256 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 313-696
Cow position: chrX:30152197-30151809 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 240
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 169

Conread position: 313-696
Cow position: chrX:30159594-30159227 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 314-690
Cow position: chrX:16000072-15999724 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 357, 8

Conread position: 314-696
Cow position: chrX:20098723-20099106 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 315-696
Cow position: chrX:15780984-15781365 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 343

Conread position: 316-545
Cow position: chrX:11632050-11632280 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 104

Conread position: 317-660
Cow position: chrX:28820139-28820491 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 172

Conread position: 317-696
Cow position: chrX:6372584-6372965 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 343

Conread position: 317-696
Cow position: chrX:6406749-6407127 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 159

Conread position: 317-696
Cow position: chrX:31202244-31202624 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 100

Conread position: 317-696
Cow position: chrX:39546577-39546189 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 355

Conread position: 318-479
Cow position: chrX:48370265-48370432 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 318-496
Cow position: chrX:30165269-30165092 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 70

Conread position: 318-696
Cow position: chrX:27422877-27422497 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 342

Conread position: 318-696
Cow position: chrX:41434005-41433636 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 5

Conread position: 319-695
Cow position: chrX:25329426-25329791 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 172

Conread position: 320-495
Cow position: chrX:10146261-10146085 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 172

Conread position: 320-695
Cow position: chrX:3417731-3417356 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 92

Conread position: 320-696
Cow position: chrX:17497502-17497880 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 345

Conread position: 320-696
Cow position: chrX:24320866-24320491 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 335

Conread position: 320-696
Cow position: chrX:25459233-25458853 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 349

Conread position: 322-493
Cow position: chrX:22578981-22578808 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 322-493
Cow position: chrX:31372870-31373043 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 164

Conread position: 322-531
Cow position: chrX:20998868-20998656 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 12, 179

Conread position: 322-551
Cow position: chrX:28156943-28157167 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 12, 95

Conread position: 322-554
Cow position: chrX:40187384-40187620 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 322-664
Cow position: chrX:20970324-20970676 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 322-679
Cow position: chrX:33822507-33822870 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 40

Conread position: 322-689
Cow position: chrX:13267284-13267655 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 7, 116

Conread position: 322-690
Cow position: chrX:3405945-3405577 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 322-690
Cow position: chrX:9898933-9898564 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 195

Conread position: 322-690
Cow position: chrX:42733274-42733643 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 236

Conread position: 322-695
Cow position: chrX:160836-161211 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 343

Conread position: 322-695
Cow position: chrX:38438896-38439256 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 149

Conread position: 322-696
Cow position: chrX:23387130-23386755 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 101

Conread position: 322-696
Cow position: chrX:27705006-27705377 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 12

Conread position: 322-696
Cow position: chrX:28646574-28646202 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 57

Conread position: 322-696
Cow position: chrX:40268884-40269260 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 343

Conread position: 322-696
Cow position: chrX:45042963-45043342 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 346

Conread position: 323-468
Cow position: chrX:19657906-19658053 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 323-470
Cow position: chrX:13922636-13922787 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 67

Conread position: 323-470
Cow position: chrX:20888200-20888051 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 323-474
Cow position: chrX:15008909-15008757 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 323-475
Cow position: chrX:10438529-10438376 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 87

Conread position: 323-486
Cow position: chrX:26441851-26441686 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 323-488
Cow position: chrX:4943801-4943633 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 323-488
Cow position: chrX:16688677-16688844 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 323-490
Cow position: chrX:22564278-22564109 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 323-504
Cow position: chrX:29064822-29065005 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 323-504
Cow position: chrX:32010546-32010363 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 323-505
Cow position: chrX:27616212-27616397 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 323-507
Cow position: chrX:8795888-8796068 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 323-507
Cow position: chrX:14049785-14049599 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 323-512
Cow position: chrX:2500222-2500032 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 145

Conread position: 323-512
Cow position: chrX:4177228-4177421 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 323-512
Cow position: chrX:22869496-22869305 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 68

Conread position: 323-512
Cow position: chrX:25451731-25451922 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 108

Conread position: 323-512
Cow position: chrX:30089644-30089452 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 102

Conread position: 323-513
Cow position: chrX:2763973-2764169 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 323-513
Cow position: chrX:5332028-5331836 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 323-513
Cow position: chrX:21582851-21583043 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 323-515
Cow position: chrX:25946638-25946440 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 323-516
Cow position: chrX:21565549-21565743 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 11, 68

Conread position: 323-520
Cow position: chrX:41082656-41082854 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 79

Conread position: 323-521
Cow position: chrX:30421739-30421538 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 323-523
Cow position: chrX:10301531-10301731 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 41

Conread position: 323-523
Cow position: chrX:14990087-14989885 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 323-541
Cow position: chrX:29083487-29083708 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 323-546
Cow position: chrX:12179088-12179309 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 32

Conread position: 323-546
Cow position: chrX:21255184-21255410 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-552
Cow position: chrX:12095176-12094945 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 323-554
Cow position: chrX:1958580-1958346 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-554
Cow position: chrX:44396359-44396587 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 100

Conread position: 323-555
Cow position: chrX:487946-488181 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 53

Conread position: 323-555
Cow position: chrX:22125458-22125223 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-574
Cow position: chrX:32194686-32194421 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 323-575
Cow position: chrX:39730730-39730477 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 108

Conread position: 323-576
Cow position: chrX:3081722-3081467 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-576
Cow position: chrX:26764683-26764428 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-587
Cow position: chrX:30060297-30060563 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-590
Cow position: chrX:16782689-16782958 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-593
Cow position: chrX:40450222-40449948 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 100

Conread position: 323-602
Cow position: chrX:12996446-12996171 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 68

Conread position: 323-607
Cow position: chrX:29907793-29907507 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 11, 46

Conread position: 323-617
Cow position: chrX:17230915-17231205 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 11, 95

Conread position: 323-617
Cow position: chrX:36202801-36203094 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 85

Conread position: 323-624
Cow position: chrX:18194099-18194402 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-624
Cow position: chrX:23452036-23451745 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 118

Conread position: 323-625
Cow position: chrX:3211136-3210831 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 83

Conread position: 323-636
Cow position: chrX:10960068-10960389 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 101

Conread position: 323-639
Cow position: chrX:9642023-9641705 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-642
Cow position: chrX:6581343-6581664 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-644
Cow position: chrX:502178-501848 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 14

Conread position: 323-652
Cow position: chrX:11073799-11073465 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 323-652
Cow position: chrX:20726169-20726500 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-653
Cow position: chrX:33815557-33815893 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 226, 249

Conread position: 323-653
Cow position: chrX:40475420-40475100 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 148

Conread position: 323-657
Cow position: chrX:17291339-17291675 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-660
Cow position: chrX:24366543-24366202 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 98

Conread position: 323-660
Cow position: chrX:44568397-44568741 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 319

Conread position: 323-662
Cow position: chrX:4482362-4482688 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 74

Conread position: 323-662
Cow position: chrX:25816845-25816505 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 323-662
Cow position: chrX:36975249-36975594 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-662
Cow position: chrX:37489134-37489468 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 197

Conread position: 323-662
Cow position: chrX:39939345-39939000 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 318

Conread position: 323-663
Cow position: chrX:1499000-1499345 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 68

Conread position: 323-663
Cow position: chrX:23987953-23988288 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 323-663
Cow position: chrX:26749470-26749122 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 167

Conread position: 323-663
Cow position: chrX:26752514-26752166 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-663
Cow position: chrX:37781668-37781334 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 78

Conread position: 323-664
Cow position: chrX:11115754-11115415 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 10

Conread position: 323-664
Cow position: chrX:33631563-33631912 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 271

Conread position: 323-664
Cow position: chrX:38961437-38961095 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-670
Cow position: chrX:16086714-16086367 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 119

Conread position: 323-670
Cow position: chrX:18488305-18487957 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-670
Cow position: chrX:34840362-34840009 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 61

Conread position: 323-675
Cow position: chrX:17122628-17122272 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 30

Conread position: 323-675
Cow position: chrX:19127839-19127465 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 94

Conread position: 323-677
Cow position: chrX:4768125-4768461 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 218

Conread position: 323-677
Cow position: chrX:30429949-30429563 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 264
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 25

Conread position: 323-680
Cow position: chrX:6202916-6203277 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 162

Conread position: 323-680
Cow position: chrX:14030427-14030786 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-680
Cow position: chrX:19228660-19228304 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 100

Conread position: 323-680
Cow position: chrX:30688474-30688833 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-680
Cow position: chrX:34543178-34543531 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 10

Conread position: 323-682
Cow position: chrX:2048521-2048873 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 82

Conread position: 323-682
Cow position: chrX:7288240-7288612 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 11, 185

Conread position: 323-682
Cow position: chrX:9635844-9635475 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 350

Conread position: 323-682
Cow position: chrX:25282084-25281712 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 258

Conread position: 323-682
Cow position: chrX:33538336-33538696 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 94

Conread position: 323-682
Cow position: chrX:35847633-35847985 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 323-688
Cow position: chrX:39294562-39294930 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 235
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 29

Conread position: 323-689
Cow position: chrX:1055979-1055611 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 10

Conread position: 323-689
Cow position: chrX:26230107-26229730 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 261

Conread position: 323-690
Cow position: chrX:41192098-41192468 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 343

Conread position: 323-692
Cow position: chrX:729455-729081 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 58

Conread position: 323-692
Cow position: chrX:4750963-4750599 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 174

Conread position: 323-692
Cow position: chrX:19400238-19400610 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 236
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 10

Conread position: 323-693
Cow position: chrX:508745-508373 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 50

Conread position: 323-693
Cow position: chrX:4326082-4325716 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 11, 111

Conread position: 323-693
Cow position: chrX:14162601-14162972 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 65

Conread position: 323-693
Cow position: chrX:18244391-18244770 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 348

Conread position: 323-693
Cow position: chrX:31728872-31729239 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 106

Conread position: 323-693
Cow position: chrX:32331040-32331412 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-693
Cow position: chrX:34554145-34554511 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 141

Conread position: 323-694
Cow position: chrX:2932311-2931938 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-694
Cow position: chrX:6493141-6493512 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 342

Conread position: 323-694
Cow position: chrX:12360297-12360671 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-694
Cow position: chrX:14408041-14407668 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-694
Cow position: chrX:27305338-27305708 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 105

Conread position: 323-694
Cow position: chrX:35388498-35388125 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 46

Conread position: 323-695
Cow position: chrX:3569851-3570234 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 351

Conread position: 323-695
Cow position: chrX:9169205-9168831 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-695
Cow position: chrX:22601006-22600633 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 145

Conread position: 323-695
Cow position: chrX:22888067-22888441 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-695
Cow position: chrX:29942559-29942934 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 168

Conread position: 323-695
Cow position: chrX:40224833-40224460 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 11

Conread position: 323-695
Cow position: chrX:42540008-42540386 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 61

Conread position: 323-695
Cow position: chrX:44193031-44192660 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 58

Conread position: 323-696
Cow position: chrX:151314-151685 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 323-696
Cow position: chrX:525088-525460 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 65

Conread position: 323-696
Cow position: chrX:671594-671225 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 78

Conread position: 323-696
Cow position: chrX:878955-878587 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 59

Conread position: 323-696
Cow position: chrX:2274326-2274701 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:2486221-2485847 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 206

Conread position: 323-696
Cow position: chrX:2559551-2559178 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:3464667-3464292 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-696
Cow position: chrX:3654017-3654388 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 130

Conread position: 323-696
Cow position: chrX:4630290-4629907 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 107

Conread position: 323-696
Cow position: chrX:4633447-4633067 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 100

Conread position: 323-696
Cow position: chrX:4665210-4664833 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 11, 61

Conread position: 323-696
Cow position: chrX:4868968-4869327 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 89

Conread position: 323-696
Cow position: chrX:4905581-4905205 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 345

Conread position: 323-696
Cow position: chrX:4996024-4996395 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 177

Conread position: 323-696
Cow position: chrX:5280444-5280069 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:5289277-5288903 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 323-696
Cow position: chrX:5306010-5306383 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 177

Conread position: 323-696
Cow position: chrX:5320310-5319933 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 185

Conread position: 323-696
Cow position: chrX:5334410-5334036 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 323

Conread position: 323-696
Cow position: chrX:5353894-5353519 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 344

Conread position: 323-696
Cow position: chrX:5375767-5376153 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 353

Conread position: 323-696
Cow position: chrX:5866555-5866930 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:6558259-6558634 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:6870154-6869779 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 340

Conread position: 323-696
Cow position: chrX:7096867-7097241 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:7486273-7486648 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:7571312-7571690 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 345

Conread position: 323-696
Cow position: chrX:7755310-7755685 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:8434794-8434423 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 230

Conread position: 323-696
Cow position: chrX:8529949-8530324 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:8641197-8641572 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:9085924-9085549 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:9128465-9128840 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:10412564-10412202 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 57

Conread position: 323-696
Cow position: chrX:10427945-10428323 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 333

Conread position: 323-696
Cow position: chrX:10445006-10444630 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:10528365-10527990 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 155

Conread position: 323-696
Cow position: chrX:10866458-10866083 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 95

Conread position: 323-696
Cow position: chrX:10915447-10915822 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:10932082-10932456 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 169

Conread position: 323-696
Cow position: chrX:11145928-11145554 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 169

Conread position: 323-696
Cow position: chrX:11461462-11461088 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 215

Conread position: 323-696
Cow position: chrX:11716053-11715678 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:11819773-11820142 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 151

Conread position: 323-696
Cow position: chrX:11950080-11949709 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 323-696
Cow position: chrX:12249210-12249589 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 134

Conread position: 323-696
Cow position: chrX:12347286-12347662 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 340

Conread position: 323-696
Cow position: chrX:13912505-13912863 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 11, 83

Conread position: 323-696
Cow position: chrX:13971830-13971443 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 349

Conread position: 323-696
Cow position: chrX:14458758-14458384 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:14462718-14463097 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 341

Conread position: 323-696
Cow position: chrX:14598255-14598629 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 224

Conread position: 323-696
Cow position: chrX:14781937-14781561 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 339

Conread position: 323-696
Cow position: chrX:15114080-15114455 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:15260210-15259835 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 339

Conread position: 323-696
Cow position: chrX:15346560-15346185 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:15621123-15620748 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 336

Conread position: 323-696
Cow position: chrX:15718282-15717895 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 323

Conread position: 323-696
Cow position: chrX:16046556-16046932 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-696
Cow position: chrX:16285620-16285993 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 263

Conread position: 323-696
Cow position: chrX:16465709-16466084 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:16711364-16711738 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 169

Conread position: 323-696
Cow position: chrX:16853981-16853605 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 345

Conread position: 323-696
Cow position: chrX:17054978-17055353 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:17891948-17892327 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 263

Conread position: 323-696
Cow position: chrX:18024449-18024823 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 261

Conread position: 323-696
Cow position: chrX:18078502-18078126 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-696
Cow position: chrX:18222822-18223197 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:18462566-18462191 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:18656396-18656021 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:18898240-18897867 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 47

Conread position: 323-696
Cow position: chrX:19399187-19399562 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:19473751-19473377 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 206

Conread position: 323-696
Cow position: chrX:20020986-20021347 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 293

Conread position: 323-696
Cow position: chrX:20032422-20032047 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:20742396-20742770 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 146

Conread position: 323-696
Cow position: chrX:21226886-21227256 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 11

Conread position: 323-696
Cow position: chrX:21415490-21415872 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 112

Conread position: 323-696
Cow position: chrX:21592696-21593067 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 169

Conread position: 323-696
Cow position: chrX:21686028-21686398 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-696
Cow position: chrX:21768213-21768588 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:22493416-22493791 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 342

Conread position: 323-696
Cow position: chrX:22521812-22521437 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:22612794-22613170 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-696
Cow position: chrX:22811298-22811670 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 68

Conread position: 323-696
Cow position: chrX:22812471-22812846 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 342

Conread position: 323-696
Cow position: chrX:23038588-23038213 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 344

Conread position: 323-696
Cow position: chrX:23121806-23122168 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 82

Conread position: 323-696
Cow position: chrX:23134987-23135356 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 323-696
Cow position: chrX:23317012-23316639 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 343

Conread position: 323-696
Cow position: chrX:23396016-23396390 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 100

Conread position: 323-696
Cow position: chrX:24413439-24413814 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:24735353-24735722 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 169

Conread position: 323-696
Cow position: chrX:24975353-24975721 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 217

Conread position: 323-696
Cow position: chrX:25289270-25288895 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:25575368-25575745 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 345

Conread position: 323-696
Cow position: chrX:26275547-26275923 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-696
Cow position: chrX:26506532-26506160 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 334

Conread position: 323-696
Cow position: chrX:26531368-26531742 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 202

Conread position: 323-696
Cow position: chrX:26617512-26617137 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:26755220-26754848 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 345

Conread position: 323-696
Cow position: chrX:26760159-26759785 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 253

Conread position: 323-696
Cow position: chrX:27095528-27095903 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 342

Conread position: 323-696
Cow position: chrX:27117373-27117748 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 33

Conread position: 323-696
Cow position: chrX:27318640-27319000 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 126

Conread position: 323-696
Cow position: chrX:27498177-27498552 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 61

Conread position: 323-696
Cow position: chrX:27594771-27594398 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:27759116-27759491 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:27977422-27977045 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-696
Cow position: chrX:28518311-28517940 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 45

Conread position: 323-696
Cow position: chrX:28559425-28559053 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 225

Conread position: 323-696
Cow position: chrX:28752931-28752556 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:28866572-28866208 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-696
Cow position: chrX:29169932-29169550 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 344

Conread position: 323-696
Cow position: chrX:29777451-29777825 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 350

Conread position: 323-696
Cow position: chrX:29841760-29841385 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-696
Cow position: chrX:29903151-29903526 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:29912748-29913123 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:30053059-30052685 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 39

Conread position: 323-696
Cow position: chrX:30143875-30143501 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 331

Conread position: 323-696
Cow position: chrX:30172298-30171926 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 52

Conread position: 323-696
Cow position: chrX:30180518-30180142 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-696
Cow position: chrX:30196706-30197081 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:30199583-30199208 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:30228705-30228327 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 300

Conread position: 323-696
Cow position: chrX:30455213-30454838 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-696
Cow position: chrX:30816860-30816485 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:30836782-30837157 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:31488923-31489296 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 82

Conread position: 323-696
Cow position: chrX:31978432-31978062 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 163

Conread position: 323-696
Cow position: chrX:34442033-34441666 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 104

Conread position: 323-696
Cow position: chrX:34761475-34761850 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:35025220-35025585 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 68

Conread position: 323-696
Cow position: chrX:35240275-35240648 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 323-696
Cow position: chrX:35288065-35288444 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 323-696
Cow position: chrX:35533260-35533635 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:35609397-35609770 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 323-696
Cow position: chrX:36250455-36250078 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 331

Conread position: 323-696
Cow position: chrX:36794403-36794778 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:37071816-37072190 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 61

Conread position: 323-696
Cow position: chrX:37080110-37079755 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 206

Conread position: 323-696
Cow position: chrX:37134124-37133750 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 97

Conread position: 323-696
Cow position: chrX:37764788-37764413 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:37773025-37772650 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:37852548-37852919 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 316

Conread position: 323-696
Cow position: chrX:38072358-38071987 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 334

Conread position: 323-696
Cow position: chrX:38151097-38151472 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 104

Conread position: 323-696
Cow position: chrX:38230858-38230483 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-696
Cow position: chrX:38330791-38331166 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:38852568-38852940 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 342

Conread position: 323-696
Cow position: chrX:39185582-39185957 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:39560243-39559868 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:39713960-39714333 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 206

Conread position: 323-696
Cow position: chrX:40452811-40452429 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 177

Conread position: 323-696
Cow position: chrX:40545213-40544824 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 323-696
Cow position: chrX:41156720-41157095 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 342

Conread position: 323-696
Cow position: chrX:41594873-41594486 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 84

Conread position: 323-696
Cow position: chrX:41847125-41846750 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 25

Conread position: 323-696
Cow position: chrX:41879521-41879147 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 311

Conread position: 323-696
Cow position: chrX:42120712-42121087 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:44054212-44054585 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 331

Conread position: 323-696
Cow position: chrX:45236875-45237250 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 337

Conread position: 323-696
Cow position: chrX:45658666-45658295 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 64

Conread position: 323-696
Cow position: chrX:45903586-45903962 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 338

Conread position: 323-696
Cow position: chrX:47211432-47211066 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 163

Conread position: 324-556
Cow position: chrX:12033513-12033289 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 76

Conread position: 324-681
Cow position: chrX:24309702-24309354 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 324-690
Cow position: chrX:7277344-7277705 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 38

Conread position: 324-690
Cow position: chrX:22604028-22603661 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 134

Conread position: 324-696
Cow position: chrX:10256732-10256360 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 297

Conread position: 324-696
Cow position: chrX:11083200-11082829 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 162

Conread position: 324-696
Cow position: chrX:12309976-12309605 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 217

Conread position: 324-696
Cow position: chrX:21833279-21833669 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 357

Conread position: 324-696
Cow position: chrX:28542483-28542098 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 93

Conread position: 324-696
Cow position: chrX:34094973-34095345 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 130
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 347, 334

Conread position: 324-696
Cow position: chrX:45967589-45967946 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 58

Conread position: 325-475
Cow position: chrX:42222374-42222225 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 325-696
Cow position: chrX:17994873-17995243 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 9

Conread position: 327-512
Cow position: chrX:22819678-22819865 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 327-554
Cow position: chrX:27982957-27982728 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 86

Conread position: 327-554
Cow position: chrX:34663560-34663330 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 52

Conread position: 327-591
Cow position: chrX:38007569-38007299 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 327-606
Cow position: chrX:2701424-2701137 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 327-682
Cow position: chrX:13785970-13785607 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 99

Conread position: 327-682
Cow position: chrX:15038399-15038031 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 327-684
Cow position: chrX:17663506-17663140 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 340

Conread position: 327-691
Cow position: chrX:24424985-24424614 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 64

Conread position: 327-693
Cow position: chrX:24317480-24317847 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 93

Conread position: 327-693
Cow position: chrX:28633063-28632699 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 79

Conread position: 327-694
Cow position: chrX:40827331-40826965 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 55

Conread position: 327-696
Cow position: chrX:20582445-20582814 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 49

Conread position: 327-696
Cow position: chrX:24441826-24441463 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 61

Conread position: 327-696
Cow position: chrX:29049393-29049754 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 64

Conread position: 327-696
Cow position: chrX:30163825-30163454 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 104

Conread position: 327-696
Cow position: chrX:30822930-30823299 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 49

Conread position: 327-696
Cow position: chrX:34990474-34990825 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 98

Conread position: 328-514
Cow position: chrX:34719930-34720115 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 328-516
Cow position: chrX:16744603-16744790 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 328-528
Cow position: chrX:34253646-34253844 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 328-540
Cow position: chrX:13030794-13030583 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 328-554
Cow position: chrX:10465202-10465427 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 328-562
Cow position: chrX:36479218-36478985 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 328-598
Cow position: chrX:2293183-2292914 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 328-661
Cow position: chrX:28706519-28706851 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 328-669
Cow position: chrX:35440966-35441309 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 221, 70

Conread position: 328-685
Cow position: chrX:30825065-30825421 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-690
Cow position: chrX:18990366-18990021 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 65, 5

Conread position: 328-696
Cow position: chrX:362036-361669 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:1576846-1576479 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:1976180-1975813 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:4343168-4343533 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:4622537-4622170 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:5123942-5123577 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:5408472-5408839 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:5423649-5423282 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:5646687-5646320 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:5892645-5893012 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:6454114-6454479 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:7119227-7118860 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:9018886-9018519 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:9153777-9154144 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:10923154-10922787 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:11358648-11358281 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:11566331-11566698 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:12001730-12001363 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:13071187-13070818 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 5

Conread position: 328-696
Cow position: chrX:13091747-13091378 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 5

Conread position: 328-696
Cow position: chrX:16478332-16478686 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:16734942-16735308 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:17782916-17783283 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:18451662-18451295 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:19109624-19109257 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:19775063-19774696 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:24509284-24509651 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:28313842-28314209 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:30752192-30752558 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 5

Conread position: 328-696
Cow position: chrX:30965518-30965885 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:32039425-32039059 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:33763761-33764128 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 5

Conread position: 328-696
Cow position: chrX:34519143-34519510 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:36195509-36195876 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:36729801-36730168 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:37061374-37061007 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:38014511-38014878 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 328-696
Cow position: chrX:41488748-41488381 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 5

Conread position: 328-696
Cow position: chrX:44168893-44168525 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 5

Conread position: 329-545
Cow position: chrX:15151259-15151051 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 329-680
Cow position: chrX:9953532-9953889 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 340

Conread position: 329-696
Cow position: chrX:3628192-3628555 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 239
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 219, 48

Conread position: 330-441
Cow position: chrX:39511750-39511861 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 330-475
Cow position: chrX:619401-619256 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 330-479
Cow position: chrX:39556377-39556227 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 16

Conread position: 330-482
Cow position: chrX:5018186-5018033 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 147, 0

Conread position: 330-495
Cow position: chrX:17490756-17490928 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 330-510
Cow position: chrX:28879188-28879008 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 330-512
Cow position: chrX:37069140-37069327 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 0

Conread position: 330-555
Cow position: chrX:17158410-17158185 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 330-580
Cow position: chrX:5392157-5391907 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 330-590
Cow position: chrX:7178081-7178330 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 201, 72

Conread position: 330-592
Cow position: chrX:45464864-45465124 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 330-609
Cow position: chrX:865814-866093 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 330-612
Cow position: chrX:21625561-21625267 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 71

Conread position: 330-631
Cow position: chrX:16808417-16808117 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 330-662
Cow position: chrX:16324826-16324497 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 38

Conread position: 330-664
Cow position: chrX:22409302-22408962 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 255

Conread position: 330-675
Cow position: chrX:6766327-6765975 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 339

Conread position: 330-682
Cow position: chrX:36557207-36557559 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 109, 59

Conread position: 330-689
Cow position: chrX:18247767-18248116 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 33

Conread position: 330-690
Cow position: chrX:165293-165669 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 248
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 42, 163

Conread position: 330-690
Cow position: chrX:47144494-47144865 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 226

Conread position: 330-694
Cow position: chrX:46297078-46297442 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 328

Conread position: 330-695
Cow position: chrX:21785187-21785550 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 160

Conread position: 330-695
Cow position: chrX:22538536-22538171 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 333

Conread position: 330-696
Cow position: chrX:1331360-1331718 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 32

Conread position: 330-696
Cow position: chrX:27446113-27446472 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 167

Conread position: 330-696
Cow position: chrX:29288995-29289360 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 154

Conread position: 330-696
Cow position: chrX:32871368-32871002 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 333

Conread position: 330-696
Cow position: chrX:37816009-37816372 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 15

Conread position: 330-696
Cow position: chrX:40591104-40591470 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 328

Conread position: 331-693
Cow position: chrX:32182615-32182246 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 144, 24

Conread position: 331-696
Cow position: chrX:15091350-15090983 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 224

Conread position: 331-696
Cow position: chrX:29225897-29226260 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 150

Conread position: 332-554
Cow position: chrX:40542091-40542308 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 333-474
Cow position: chrX:38935847-38935988 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 333-478
Cow position: chrX:7444356-7444501 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 333-493
Cow position: chrX:32584511-32584351 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 333-512
Cow position: chrX:18288039-18287865 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 333-512
Cow position: chrX:32057478-32057299 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 333-515
Cow position: chrX:11744689-11744869 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 333-521
Cow position: chrX:40384467-40384655 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 333-521
Cow position: chrX:40601540-40601728 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 333-523
Cow position: chrX:23022734-23022924 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 333-524
Cow position: chrX:15486239-15486048 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 333-531
Cow position: chrX:5292509-5292309 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 333-531
Cow position: chrX:31496157-31496355 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 157
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 333-540
Cow position: chrX:40365322-40365116 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 333-544
Cow position: chrX:22871535-22871750 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 45

Conread position: 333-554
Cow position: chrX:42010456-42010674 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 333-555
Cow position: chrX:2648940-2648719 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 114, 0

Conread position: 333-555
Cow position: chrX:29055340-29055556 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 52

Conread position: 333-580
Cow position: chrX:39702272-39702511 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 333-591
Cow position: chrX:6642113-6642384 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 157, 14

Conread position: 333-592
Cow position: chrX:28558308-28558565 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 100, 0

Conread position: 333-603
Cow position: chrX:12823421-12823697 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 238

Conread position: 333-612
Cow position: chrX:13851910-13852192 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 70

Conread position: 333-617
Cow position: chrX:37364143-37364425 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 51

Conread position: 333-624
Cow position: chrX:3096334-3096043 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 333-639
Cow position: chrX:18711957-18712265 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 214, 41

Conread position: 333-644
Cow position: chrX:46985172-46984845 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 48

Conread position: 333-646
Cow position: chrX:27323438-27323122 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 224, 41

Conread position: 333-651
Cow position: chrX:44874111-44873802 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 333-652
Cow position: chrX:388928-389248 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 206
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 215, 33

Conread position: 333-661
Cow position: chrX:12724188-12724518 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 188

Conread position: 333-662
Cow position: chrX:6279185-6278863 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 333-662
Cow position: chrX:11855590-11855919 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 333-662
Cow position: chrX:34866411-34866085 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 62

Conread position: 333-662
Cow position: chrX:42462329-42461998 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 55

Conread position: 333-662
Cow position: chrX:44901565-44901901 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 333-663
Cow position: chrX:11674477-11674809 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 110

Conread position: 333-663
Cow position: chrX:13359815-13360144 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 32

Conread position: 333-664
Cow position: chrX:9391426-9391092 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 212
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 215, 250

Conread position: 333-664
Cow position: chrX:24163035-24162709 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 144, 44

Conread position: 333-666
Cow position: chrX:11509488-11509826 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 213
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 216, 59

Conread position: 333-670
Cow position: chrX:3145424-3145761 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 13

Conread position: 333-670
Cow position: chrX:8517025-8517365 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 157

Conread position: 333-670
Cow position: chrX:37955322-37955659 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 45

Conread position: 333-670
Cow position: chrX:42499653-42499308 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 326

Conread position: 333-673
Cow position: chrX:37832052-37831708 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 112

Conread position: 333-675
Cow position: chrX:25404935-25404592 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 41

Conread position: 333-677
Cow position: chrX:2185660-2185991 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 212, 88

Conread position: 333-678
Cow position: chrX:20801194-20801543 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 117

Conread position: 333-679
Cow position: chrX:39558944-39558600 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 107

Conread position: 333-680
Cow position: chrX:9854694-9855048 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 337

Conread position: 333-680
Cow position: chrX:24031389-24031038 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 225
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 214, 246

Conread position: 333-681
Cow position: chrX:19929856-19930199 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 211, 48

Conread position: 333-682
Cow position: chrX:2382888-2383221 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 166, 86

Conread position: 333-682
Cow position: chrX:19437664-19437317 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 79

Conread position: 333-682
Cow position: chrX:27772662-27772340 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 136

Conread position: 333-682
Cow position: chrX:28624340-28623990 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 167

Conread position: 333-690
Cow position: chrX:2160186-2160543 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 322

Conread position: 333-690
Cow position: chrX:17200208-17200581 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 349

Conread position: 333-690
Cow position: chrX:27485824-27486186 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 338

Conread position: 333-690
Cow position: chrX:28503757-28504104 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 291

Conread position: 333-693
Cow position: chrX:15439216-15438868 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 157

Conread position: 333-693
Cow position: chrX:22330148-22329788 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 161, 45

Conread position: 333-693
Cow position: chrX:39383660-39383298 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 85

Conread position: 333-693
Cow position: chrX:43408421-43408783 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 221, 25

Conread position: 333-694
Cow position: chrX:12290159-12290517 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 44

Conread position: 333-694
Cow position: chrX:14908434-14908798 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 14

Conread position: 333-694
Cow position: chrX:16229552-16229193 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 234
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 216, 65

Conread position: 333-694
Cow position: chrX:27443137-27442773 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 65

Conread position: 333-695
Cow position: chrX:12458118-12458481 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 326

Conread position: 333-695
Cow position: chrX:13069323-13068955 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 66

Conread position: 333-695
Cow position: chrX:13089884-13089516 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 66

Conread position: 333-695
Cow position: chrX:28513494-28513855 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 167

Conread position: 333-695
Cow position: chrX:30139363-30139001 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 326

Conread position: 333-696
Cow position: chrX:1793747-1793376 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 117, 88

Conread position: 333-696
Cow position: chrX:2103826-2104189 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 325

Conread position: 333-696
Cow position: chrX:2524315-2523946 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 331

Conread position: 333-696
Cow position: chrX:3361242-3361603 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 212

Conread position: 333-696
Cow position: chrX:3372432-3372074 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 271

Conread position: 333-696
Cow position: chrX:7551382-7551011 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 340

Conread position: 333-696
Cow position: chrX:9011748-9012111 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 325

Conread position: 333-696
Cow position: chrX:14884541-14884178 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 267

Conread position: 333-696
Cow position: chrX:15329073-15329437 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 326

Conread position: 333-696
Cow position: chrX:16359588-16359231 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 0

Conread position: 333-696
Cow position: chrX:17743490-17743844 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 214

Conread position: 333-696
Cow position: chrX:19022888-19022525 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 326

Conread position: 333-696
Cow position: chrX:20652829-20653179 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 87

Conread position: 333-696
Cow position: chrX:21973361-21973723 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 47

Conread position: 333-696
Cow position: chrX:24173744-24173385 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 212

Conread position: 333-696
Cow position: chrX:24467704-24467341 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 326

Conread position: 333-696
Cow position: chrX:24482948-24482587 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 85

Conread position: 333-696
Cow position: chrX:24769436-24769076 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 37

Conread position: 333-696
Cow position: chrX:26974331-26974694 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 325

Conread position: 333-696
Cow position: chrX:27997072-27997434 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 333-696
Cow position: chrX:28588392-28588754 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 167

Conread position: 333-696
Cow position: chrX:30531607-30531248 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 97

Conread position: 333-696
Cow position: chrX:34009168-34009534 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 57

Conread position: 333-696
Cow position: chrX:34993592-34993963 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 106

Conread position: 333-696
Cow position: chrX:35268317-35268674 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 48

Conread position: 333-696
Cow position: chrX:39292322-39291959 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 326

Conread position: 333-696
Cow position: chrX:41103213-41103572 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 37

Conread position: 333-696
Cow position: chrX:41122491-41122856 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 235

Conread position: 334-467
Cow position: chrX:28133536-28133665 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 334-492
Cow position: chrX:3652435-3652593 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 9

Conread position: 334-592
Cow position: chrX:45975981-45976239 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 202, 83

Conread position: 334-621
Cow position: chrX:18468192-18468483 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 214, 45

Conread position: 334-657
Cow position: chrX:15993817-15994132 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 197, 51

Conread position: 334-660
Cow position: chrX:44052324-44052655 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 176, 212

Conread position: 334-662
Cow position: chrX:39352222-39351895 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 204, 74

Conread position: 334-663
Cow position: chrX:21191292-21191629 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 46, 155

Conread position: 334-673
Cow position: chrX:13928329-13927994 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 334-682
Cow position: chrX:13057980-13058332 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 187

Conread position: 334-690
Cow position: chrX:13404930-13404567 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 141

Conread position: 334-694
Cow position: chrX:45413227-45412873 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 334-696
Cow position: chrX:8782166-8782528 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 334-696
Cow position: chrX:10440412-10440054 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 28

Conread position: 334-696
Cow position: chrX:12145524-12145878 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 334-696
Cow position: chrX:16703093-16703454 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 156

Conread position: 334-696
Cow position: chrX:29760109-29760483 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 336

Conread position: 334-696
Cow position: chrX:30822006-30822368 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 324

Conread position: 334-696
Cow position: chrX:43217813-43218179 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 153

Conread position: 335-469
Cow position: chrX:1947536-1947402 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 335-475
Cow position: chrX:32071258-32071117 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 335-520
Cow position: chrX:33685020-33684836 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 177, 0

Conread position: 335-547
Cow position: chrX:42380419-42380206 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 335-660
Cow position: chrX:23382762-23382423 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 335-660
Cow position: chrX:31982205-31981874 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 213, 0

Conread position: 335-675
Cow position: chrX:17265624-17265283 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 98

Conread position: 335-680
Cow position: chrX:33827626-33827264 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 265

Conread position: 335-696
Cow position: chrX:1810737-1810377 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 222

Conread position: 335-696
Cow position: chrX:31814466-31814105 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 323

Conread position: 335-696
Cow position: chrX:36535312-36534951 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 323

Conread position: 337-696
Cow position: chrX:15173099-15172747 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 58

Conread position: 338-675
Cow position: chrX:10077966-10078308 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 90

Conread position: 338-694
Cow position: chrX:47380041-47379685 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 24

Conread position: 340-515
Cow position: chrX:31570474-31570650 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 340-696
Cow position: chrX:8590961-8591324 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 158

Conread position: 343-475
Cow position: chrX:1729431-1729299 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 343-492
Cow position: chrX:2324137-2324285 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 343-493
Cow position: chrX:631189-631039 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 12

Conread position: 343-496
Cow position: chrX:21390223-21390372 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 343-511
Cow position: chrX:14263347-14263179 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 343-512
Cow position: chrX:28608582-28608414 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 343-512
Cow position: chrX:39387000-39386831 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 343-521
Cow position: chrX:2300311-2300489 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 343-525
Cow position: chrX:15306301-15306119 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 145

Conread position: 343-546
Cow position: chrX:16290590-16290379 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 343-547
Cow position: chrX:34034757-34034961 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 60

Conread position: 343-580
Cow position: chrX:44802878-44803109 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 179

Conread position: 343-590
Cow position: chrX:5639506-5639258 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 343-591
Cow position: chrX:26508668-26508924 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 343-628
Cow position: chrX:1525216-1524929 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 157, 107

Conread position: 343-634
Cow position: chrX:30354817-30355117 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 108, 171

Conread position: 343-663
Cow position: chrX:4329651-4329329 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 205, 51

Conread position: 343-663
Cow position: chrX:9537973-9538294 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 38

Conread position: 343-663
Cow position: chrX:13405866-13405545 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 0

Conread position: 343-663
Cow position: chrX:23414957-23414631 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 343-663
Cow position: chrX:44961151-44961464 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 343-664
Cow position: chrX:38140609-38140281 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 295

Conread position: 343-676
Cow position: chrX:38999334-38999661 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 82

Conread position: 343-680
Cow position: chrX:1977924-1978262 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 121

Conread position: 343-680
Cow position: chrX:9299418-9299071 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 335

Conread position: 343-681
Cow position: chrX:2463265-2462929 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 75

Conread position: 343-681
Cow position: chrX:37066703-37067045 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 95

Conread position: 343-682
Cow position: chrX:7424857-7425200 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 343-682
Cow position: chrX:9837549-9837890 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 154

Conread position: 343-682
Cow position: chrX:29875570-29875225 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 36, 82

Conread position: 343-689
Cow position: chrX:32430770-32431112 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 78

Conread position: 343-689
Cow position: chrX:41733763-41733407 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 11

Conread position: 343-693
Cow position: chrX:20974485-20974816 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 58

Conread position: 343-693
Cow position: chrX:22115851-22115497 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 27

Conread position: 343-693
Cow position: chrX:33614828-33615186 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 141, 0

Conread position: 343-696
Cow position: chrX:6012674-6012323 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 68

Conread position: 343-696
Cow position: chrX:13138784-13138429 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 17

Conread position: 343-696
Cow position: chrX:15120454-15120105 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 38

Conread position: 343-696
Cow position: chrX:16078097-16078453 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 169

Conread position: 343-696
Cow position: chrX:18293370-18293716 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 122

Conread position: 343-696
Cow position: chrX:20878331-20877979 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 229

Conread position: 343-696
Cow position: chrX:23280438-23280790 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 227

Conread position: 343-696
Cow position: chrX:29915793-29915443 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 34

Conread position: 343-696
Cow position: chrX:30919960-30919608 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 214, 73

Conread position: 343-696
Cow position: chrX:34222182-34222533 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 182

Conread position: 343-696
Cow position: chrX:35409105-35409452 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 157

Conread position: 343-696
Cow position: chrX:47000221-46999880 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 74

Conread position: 344-473
Cow position: chrX:20707926-20708054 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 344-475
Cow position: chrX:36840135-36840266 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 344-546
Cow position: chrX:18455350-18455148 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 128, 66

Conread position: 344-644
Cow position: chrX:17610027-17609722 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 75

Conread position: 344-656
Cow position: chrX:23666615-23666927 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 183

Conread position: 344-662
Cow position: chrX:20654002-20654330 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 154, 116

Conread position: 344-663
Cow position: chrX:9911342-9911016 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 302

Conread position: 344-664
Cow position: chrX:5648953-5648643 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 130, 12

Conread position: 344-677
Cow position: chrX:20131459-20131115 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 330

Conread position: 344-678
Cow position: chrX:6835829-6835494 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 55

Conread position: 344-678
Cow position: chrX:29602608-29602281 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 344-680
Cow position: chrX:323347-323683 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 319

Conread position: 344-682
Cow position: chrX:13889268-13889605 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 200, 139

Conread position: 344-682
Cow position: chrX:17631401-17631062 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 177

Conread position: 344-682
Cow position: chrX:44019132-44019472 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 138, 46

Conread position: 344-691
Cow position: chrX:39757465-39757812 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 314

Conread position: 344-693
Cow position: chrX:29876629-29876276 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 45

Conread position: 344-694
Cow position: chrX:7695212-7695543 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 344-696
Cow position: chrX:3649376-3649025 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 344-696
Cow position: chrX:3807835-3808192 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 95

Conread position: 344-696
Cow position: chrX:7805808-7806161 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 304

Conread position: 344-696
Cow position: chrX:11655515-11655870 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 55

Conread position: 344-696
Cow position: chrX:24588022-24587670 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 344-696
Cow position: chrX:29849200-29848847 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 244

Conread position: 344-696
Cow position: chrX:31261204-31260846 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 146

Conread position: 344-696
Cow position: chrX:37957929-37958281 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 314

Conread position: 344-696
Cow position: chrX:38052000-38051648 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 315

Conread position: 344-696
Cow position: chrX:44367208-44367560 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 30

Conread position: 345-496
Cow position: chrX:617015-616864 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 127
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 345-532
Cow position: chrX:16020951-16020765 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 345-555
Cow position: chrX:8103870-8103665 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 22

Conread position: 345-555
Cow position: chrX:16514814-16514604 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 345-649
Cow position: chrX:41762377-41762083 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 42

Conread position: 345-660
Cow position: chrX:21662532-21662843 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 25

Conread position: 345-663
Cow position: chrX:8541898-8542222 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 5, 235

Conread position: 345-670
Cow position: chrX:35680777-35681092 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 145

Conread position: 345-673
Cow position: chrX:30980460-30980143 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 102, 203

Conread position: 345-694
Cow position: chrX:28024696-28025045 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 140

Conread position: 345-696
Cow position: chrX:2715055-2715406 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 313

Conread position: 345-696
Cow position: chrX:24447245-24447585 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 145

Conread position: 345-696
Cow position: chrX:29010153-29010517 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 37

Conread position: 345-696
Cow position: chrX:34564734-34565081 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 346-677
Cow position: chrX:21501052-21501390 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 199, 169

Conread position: 346-693
Cow position: chrX:2151498-2151151 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 312

Conread position: 346-696
Cow position: chrX:23109198-23109543 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 130

Conread position: 347-486
Cow position: chrX:1616801-1616664 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 347-543
Cow position: chrX:24231836-24231638 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 93

Conread position: 348-553
Cow position: chrX:10998398-10998603 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 35

Conread position: 348-651
Cow position: chrX:25176234-25176539 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 198
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 161, 150

Conread position: 348-688
Cow position: chrX:13430026-13429699 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 142

Conread position: 349-486
Cow position: chrX:30544545-30544409 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 349-508
Cow position: chrX:44737694-44737534 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 349-521
Cow position: chrX:31472816-31472989 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 168, 0

Conread position: 349-617
Cow position: chrX:35260413-35260682 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 0

Conread position: 349-634
Cow position: chrX:25198878-25199158 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 22

Conread position: 349-660
Cow position: chrX:23832004-23831698 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 199
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 112, 37

Conread position: 349-663
Cow position: chrX:26626260-26625934 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 349-674
Cow position: chrX:40496161-40495836 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 223, 91

Conread position: 349-680
Cow position: chrX:30085814-30085497 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 16

Conread position: 349-682
Cow position: chrX:25163217-25163563 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 36

Conread position: 349-692
Cow position: chrX:26878093-26878447 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 349-693
Cow position: chrX:12291797-12292129 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 316, 81

Conread position: 349-695
Cow position: chrX:6543695-6544039 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 25

Conread position: 349-696
Cow position: chrX:10351298-10351645 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 309

Conread position: 350-624
Cow position: chrX:2579857-2580130 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 0

Conread position: 350-687
Cow position: chrX:14267766-14267421 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 18

Conread position: 350-695
Cow position: chrX:22568579-22568236 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 259

Conread position: 350-696
Cow position: chrX:8483529-8483872 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 23

Conread position: 350-696
Cow position: chrX:23572361-23572016 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 31

Conread position: 351-670
Cow position: chrX:33589576-33589896 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 67

Conread position: 351-676
Cow position: chrX:4408998-4409336 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 197, 0

Conread position: 351-695
Cow position: chrX:17064747-17064400 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 210
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 191, 0

Conread position: 351-696
Cow position: chrX:15574447-15574102 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 131

Conread position: 351-696
Cow position: chrX:33803578-33803229 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 27

Conread position: 351-696
Cow position: chrX:41114637-41114988 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 158, 35

Conread position: 352-545
Cow position: chrX:20544679-20544472 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 352-545
Cow position: chrX:24202465-24202659 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 352-652
Cow position: chrX:20734085-20734389 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 199, 138

Conread position: 352-664
Cow position: chrX:5246687-5247006 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 134

Conread position: 352-696
Cow position: chrX:23341554-23341213 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 185

Conread position: 353-514
Cow position: chrX:34502387-34502551 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 91

Conread position: 353-576
Cow position: chrX:9227640-9227417 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 353-590
Cow position: chrX:6235199-6234979 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 353-624
Cow position: chrX:21595978-21596249 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 104

Conread position: 353-630
Cow position: chrX:37118338-37118623 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 125

Conread position: 353-690
Cow position: chrX:16040240-16039902 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 353-694
Cow position: chrX:38963554-38963891 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 187

Conread position: 353-696
Cow position: chrX:7677412-7677752 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 50

Conread position: 353-696
Cow position: chrX:23986690-23987028 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 84

Conread position: 353-696
Cow position: chrX:36513902-36514237 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 264

Conread position: 353-696
Cow position: chrX:38227652-38227306 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 313

Conread position: 354-696
Cow position: chrX:2479185-2478844 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 0

Conread position: 354-696
Cow position: chrX:14819156-14819496 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 46

Conread position: 355-662
Cow position: chrX:35937623-35937319 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 160

Conread position: 355-687
Cow position: chrX:41527069-41526746 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 141

Conread position: 356-524
Cow position: chrX:21060917-21061084 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 356-651
Cow position: chrX:18988905-18989205 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 207, 134

Conread position: 356-657
Cow position: chrX:48590246-48589932 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 204
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 22

Conread position: 356-670
Cow position: chrX:21815610-21815926 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 89

Conread position: 356-677
Cow position: chrX:6695904-6695580 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 26

Conread position: 356-696
Cow position: chrX:12465939-12466279 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 356-696
Cow position: chrX:30940625-30940965 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 302

Conread position: 357-695
Cow position: chrX:24280382-24280718 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 29

Conread position: 357-696
Cow position: chrX:27404500-27404162 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 275

Conread position: 358-474
Cow position: chrX:28105057-28105174 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 96

Conread position: 358-682
Cow position: chrX:28110941-28111266 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 116

Conread position: 358-693
Cow position: chrX:3396328-3395984 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 195, 230

Conread position: 358-696
Cow position: chrX:27098571-27098237 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 191, 19

Conread position: 358-696
Cow position: chrX:31605130-31605468 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 300

Conread position: 358-696
Cow position: chrX:40121557-40121231 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 168

Conread position: 358-696
Cow position: chrX:41790992-41790656 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 178

Conread position: 359-693
Cow position: chrX:5808694-5808366 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 261, 192

Conread position: 359-696
Cow position: chrX:23932784-23932455 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 172, 176

Conread position: 360-555
Cow position: chrX:11614142-11614338 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 69, 0

Conread position: 360-603
Cow position: chrX:11081299-11081065 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 360-651
Cow position: chrX:32329472-32329760 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 361-588
Cow position: chrX:27395550-27395317 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 109, 95

Conread position: 361-658
Cow position: chrX:8518521-8518821 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 170, 174

Conread position: 362-696
Cow position: chrX:43648306-43647960 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 54

Conread position: 364-475
Cow position: chrX:25569044-25568934 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 364-502
Cow position: chrX:30142154-30142014 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 13

Conread position: 364-696
Cow position: chrX:14122299-14121968 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 236

Conread position: 364-696
Cow position: chrX:19636364-19636694 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 218
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 193, 142

Conread position: 365-540
Cow position: chrX:22139791-22139615 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 365-664
Cow position: chrX:4415302-4415605 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 9

Conread position: 365-682
Cow position: chrX:2790689-2791008 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 20

Conread position: 365-693
Cow position: chrX:18799831-18799500 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 184, 24

Conread position: 365-696
Cow position: chrX:529251-529587 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 37, 21

Conread position: 366-508
Cow position: chrX:14901614-14901472 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 127, 113

Conread position: 367-655
Cow position: chrX:32623016-32623308 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 367-696
Cow position: chrX:44930095-44930418 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 139

Conread position: 368-664
Cow position: chrX:37105625-37105921 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 189, 291

Conread position: 368-694
Cow position: chrX:32114570-32114888 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 14

Conread position: 368-695
Cow position: chrX:27240192-27240521 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 180, 62

Conread position: 369-663
Cow position: chrX:46533063-46532769 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 369-664
Cow position: chrX:3223591-3223290 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 369-696
Cow position: chrX:1518991-1518655 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 298

Conread position: 369-696
Cow position: chrX:17978336-17978653 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 13

Conread position: 369-696
Cow position: chrX:39316648-39316328 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 16

Conread position: 369-696
Cow position: chrX:47368792-47368465 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 60, 240

Conread position: 370-503
Cow position: chrX:31373057-31373190 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 370-574
Cow position: chrX:22771676-22771470 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 0

Conread position: 370-615
Cow position: chrX:20766571-20766823 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 166
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 233

Conread position: 371-521
Cow position: chrX:46721538-46721386 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 371-555
Cow position: chrX:42954886-42955060 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 371-639
Cow position: chrX:13178005-13177730 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 371-660
Cow position: chrX:46698616-46698323 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 122, 11

Conread position: 371-663
Cow position: chrX:3582651-3582948 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 119

Conread position: 371-663
Cow position: chrX:45992706-45993001 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 41

Conread position: 371-672
Cow position: chrX:41067295-41067598 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 18

Conread position: 371-675
Cow position: chrX:23969816-23970121 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 371-682
Cow position: chrX:2146773-2147084 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 113

Conread position: 371-683
Cow position: chrX:16354897-16354574 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 89, 120

Conread position: 371-695
Cow position: chrX:45430563-45430234 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 69

Conread position: 371-696
Cow position: chrX:10583450-10583120 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 158, 26

Conread position: 371-696
Cow position: chrX:17522756-17522427 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 10

Conread position: 371-696
Cow position: chrX:24006364-24006039 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 178, 7

Conread position: 371-696
Cow position: chrX:24105087-24105410 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 101

Conread position: 371-696
Cow position: chrX:32144703-32144379 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 102

Conread position: 371-696
Cow position: chrX:45373824-45373508 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 300, 220

Conread position: 373-610
Cow position: chrX:21459144-21458907 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 373-612
Cow position: chrX:19333684-19333445 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 373-664
Cow position: chrX:37949242-37949544 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 57, 116

Conread position: 374-475
Cow position: chrX:125955-126056 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-617
Cow position: chrX:34797496-34797739 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 374-661
Cow position: chrX:39125772-39126063 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 102

Conread position: 374-664
Cow position: chrX:28993685-28993393 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 173, 66

Conread position: 374-670
Cow position: chrX:20675568-20675857 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 64

Conread position: 374-673
Cow position: chrX:22901203-22900899 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 290

Conread position: 374-679
Cow position: chrX:3596605-3596300 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 284

Conread position: 374-689
Cow position: chrX:22449376-22449691 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 374-693
Cow position: chrX:8806877-8806556 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 76

Conread position: 374-693
Cow position: chrX:31777973-31777659 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 184, 110

Conread position: 374-695
Cow position: chrX:39698789-39699109 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 199

Conread position: 374-696
Cow position: chrX:45113096-45113412 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 287

Conread position: 375-696
Cow position: chrX:22522368-22522047 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 283

Conread position: 377-572
Cow position: chrX:40559798-40559603 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 377-683
Cow position: chrX:20504228-20504535 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 9

Conread position: 377-695
Cow position: chrX:45200427-45200104 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 170, 120

Conread position: 377-696
Cow position: chrX:12853040-12852725 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 158, 21

Conread position: 378-663
Cow position: chrX:5277452-5277165 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 179, 117

Conread position: 378-693
Cow position: chrX:40717406-40717718 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 294, 162

Conread position: 378-696
Cow position: chrX:158367-158050 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 169, 67

Conread position: 379-503
Cow position: chrX:40581266-40581391 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 379-513
Cow position: chrX:17889155-17889021 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 379-612
Cow position: chrX:11448635-11448398 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 22

Conread position: 379-662
Cow position: chrX:29031847-29032135 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 168, 7

Conread position: 379-664
Cow position: chrX:19878500-19878789 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 178, 0

Conread position: 379-664
Cow position: chrX:37128319-37128611 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 140

Conread position: 379-690
Cow position: chrX:5070022-5069714 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 125, 132

Conread position: 379-693
Cow position: chrX:40322391-40322697 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 170, 23

Conread position: 379-696
Cow position: chrX:4123303-4123619 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 48

Conread position: 379-696
Cow position: chrX:41049574-41049899 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 182, 0

Conread position: 380-680
Cow position: chrX:48310917-48310612 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 176, 239

Conread position: 380-693
Cow position: chrX:20957483-20957799 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 167, 192

Conread position: 380-695
Cow position: chrX:15531684-15531372 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 199

Conread position: 381-586
Cow position: chrX:35272834-35273042 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 381-680
Cow position: chrX:42531027-42530717 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 116

Conread position: 381-696
Cow position: chrX:3208091-3207778 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 18

Conread position: 381-696
Cow position: chrX:6196283-6195970 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 28

Conread position: 382-535
Cow position: chrX:29023536-29023688 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 382-593
Cow position: chrX:23908705-23908490 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 175, 0

Conread position: 382-637
Cow position: chrX:38642490-38642750 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 194

Conread position: 382-662
Cow position: chrX:16733280-16732996 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 175, 108

Conread position: 382-664
Cow position: chrX:3471192-3471479 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 382-690
Cow position: chrX:33003722-33004034 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 167, 69

Conread position: 382-696
Cow position: chrX:20538749-20539054 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 35

Conread position: 383-657
Cow position: chrX:36530485-36530752 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 168, 45

Conread position: 383-659
Cow position: chrX:3813012-3813297 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 116

Conread position: 383-670
Cow position: chrX:8943298-8943009 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 164, 12

Conread position: 383-684
Cow position: chrX:18684250-18684554 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 166, 214

Conread position: 383-690
Cow position: chrX:15007680-15007373 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 280

Conread position: 383-693
Cow position: chrX:1394083-1394400 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 206
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 165, 107

Conread position: 383-696
Cow position: chrX:3653245-3653547 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 38

Conread position: 383-696
Cow position: chrX:21765070-21765387 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 68, 105

Conread position: 383-696
Cow position: chrX:37760324-37760648 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 205

Conread position: 384-554
Cow position: chrX:14924508-14924678 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 384-658
Cow position: chrX:40517058-40517336 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 164, 236

Conread position: 384-677
Cow position: chrX:25205176-25205473 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 66, 78

Conread position: 384-696
Cow position: chrX:18459990-18459674 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 94, 115

Conread position: 384-696
Cow position: chrX:35694511-35694829 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 161, 0

Conread position: 385-694
Cow position: chrX:35832883-35833191 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 201
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 163, 79

Conread position: 385-695
Cow position: chrX:16345392-16345705 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 163, 225

Conread position: 385-696
Cow position: chrX:12008207-12007898 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 385-696
Cow position: chrX:23218546-23218862 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 39, 78

Conread position: 386-653
Cow position: chrX:20383063-20382790 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 161, 0

Conread position: 386-667
Cow position: chrX:33707872-33708150 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 171, 104

Conread position: 386-682
Cow position: chrX:36294609-36294900 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 9

Conread position: 386-685
Cow position: chrX:5566349-5566045 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 145, 42

Conread position: 386-693
Cow position: chrX:24788237-24787935 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 115

Conread position: 386-696
Cow position: chrX:1550421-1550734 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 280

Conread position: 386-696
Cow position: chrX:6566548-6566858 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 272

Conread position: 386-696
Cow position: chrX:12111184-12110871 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 152, 243

Conread position: 386-696
Cow position: chrX:16074062-16074360 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 184

Conread position: 386-696
Cow position: chrX:25150662-25150979 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 159, 55

Conread position: 387-493
Cow position: chrX:1185620-1185727 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 387-555
Cow position: chrX:24174213-24174046 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 104

Conread position: 387-555
Cow position: chrX:38793971-38794138 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 387-685
Cow position: chrX:23514999-23514698 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 173, 40

Conread position: 387-690
Cow position: chrX:24205474-24205785 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 94, 205

Conread position: 387-693
Cow position: chrX:40481395-40481090 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 113

Conread position: 387-696
Cow position: chrX:17965041-17964738 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 161, 140

Conread position: 388-696
Cow position: chrX:25039058-25039368 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 158, 93

Conread position: 389-696
Cow position: chrX:2418006-2417700 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 101

Conread position: 389-696
Cow position: chrX:9651569-9651262 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 275

Conread position: 389-696
Cow position: chrX:11588186-11587869 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 134

Conread position: 389-696
Cow position: chrX:22772132-22772439 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 269

Conread position: 389-696
Cow position: chrX:42591202-42591509 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 269

Conread position: 389-696
Cow position: chrX:48423412-48423719 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 269

Conread position: 390-574
Cow position: chrX:31435805-31435988 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 166, 0

Conread position: 390-662
Cow position: chrX:40788625-40788910 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 113, 205

Conread position: 390-695
Cow position: chrX:20340412-20340108 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 172

Conread position: 392-600
Cow position: chrX:38584207-38584415 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 392-696
Cow position: chrX:31949449-31949147 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 81

Conread position: 392-696
Cow position: chrX:42470456-42470153 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 46

Conread position: 394-696
Cow position: chrX:27749527-27749225 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 271

Conread position: 395-552
Cow position: chrX:24293215-24293063 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 395-675
Cow position: chrX:4156080-4155803 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 175
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 185, 0

Conread position: 395-696
Cow position: chrX:3154776-3154462 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 395-696
Cow position: chrX:29780228-29780529 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 268

Conread position: 396-629
Cow position: chrX:30833944-30833705 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 29

Conread position: 396-670
Cow position: chrX:42459656-42459929 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 0

Conread position: 396-696
Cow position: chrX:25277015-25276715 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 262

Conread position: 397-682
Cow position: chrX:38548892-38549183 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 106

Conread position: 398-693
Cow position: chrX:19595752-19596054 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 147, 53

Conread position: 399-656
Cow position: chrX:21025553-21025298 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 84

Conread position: 399-696
Cow position: chrX:487452-487753 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 130

Conread position: 399-696
Cow position: chrX:3157105-3157402 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 259

Conread position: 404-546
Cow position: chrX:36900998-36900859 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 404-671
Cow position: chrX:46701596-46701335 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 81

Conread position: 404-689
Cow position: chrX:41689044-41689313 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 404-696
Cow position: chrX:30093872-30093583 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 0

Conread position: 404-696
Cow position: chrX:42994115-42994398 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 48

Conread position: 405-546
Cow position: chrX:46824248-46824107 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 405-696
Cow position: chrX:32743038-32743322 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 85

Conread position: 407-693
Cow position: chrX:17082914-17082626 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 150, 53

Conread position: 407-696
Cow position: chrX:14133972-14134259 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 19

Conread position: 408-696
Cow position: chrX:3161517-3161232 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 89

Conread position: 408-696
Cow position: chrX:5871813-5872097 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 110

Conread position: 408-696
Cow position: chrX:11373503-11373222 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 264, 45

Conread position: 408-696
Cow position: chrX:25925057-25924753 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 266

Conread position: 409-666
Cow position: chrX:38940873-38941130 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 250

Conread position: 409-680
Cow position: chrX:38934751-38935023 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 250

Conread position: 409-696
Cow position: chrX:2351559-2351846 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 157

Conread position: 409-696
Cow position: chrX:3387603-3387890 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 249

Conread position: 409-696
Cow position: chrX:8325773-8326043 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 409-696
Cow position: chrX:20976570-20976278 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 141, 262

Conread position: 409-696
Cow position: chrX:34238218-34238505 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 18

Conread position: 410-542
Cow position: chrX:7381758-7381891 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 410-695
Cow position: chrX:8869887-8869601 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 254

Conread position: 410-696
Cow position: chrX:45786628-45786914 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 253

Conread position: 411-545
Cow position: chrX:40790031-40789899 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 411-673
Cow position: chrX:13030142-13029881 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 411-680
Cow position: chrX:31745998-31745727 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 411-682
Cow position: chrX:12980848-12980577 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 411-696
Cow position: chrX:22077826-22078111 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 247

Conread position: 411-696
Cow position: chrX:27105757-27106042 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 31

Conread position: 411-696
Cow position: chrX:34754693-34754408 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 254

Conread position: 412-690
Cow position: chrX:13266330-13266046 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 89

Conread position: 412-696
Cow position: chrX:12691159-12690875 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 246

Conread position: 412-696
Cow position: chrX:15232132-15231844 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 412-696
Cow position: chrX:35223802-35224086 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 251

Conread position: 412-696
Cow position: chrX:47317906-47318190 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 245

Conread position: 413-607
Cow position: chrX:31251766-31251960 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 414-596
Cow position: chrX:18215433-18215616 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 414-682
Cow position: chrX:36133709-36133442 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 173

Conread position: 414-690
Cow position: chrX:37572666-37572942 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 249

Conread position: 414-693
Cow position: chrX:34532033-34532312 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 249

Conread position: 416-646
Cow position: chrX:32803362-32803143 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 73

Conread position: 416-696
Cow position: chrX:11904818-11904541 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 182
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 71

Conread position: 416-696
Cow position: chrX:12437728-12437455 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 417-663
Cow position: chrX:16790312-16790072 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 183, 139

Conread position: 417-690
Cow position: chrX:4566425-4566148 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 155

Conread position: 417-692
Cow position: chrX:43980250-43980531 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 229

Conread position: 417-696
Cow position: chrX:9252666-9252394 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 417-696
Cow position: chrX:12115546-12115822 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 417-696
Cow position: chrX:21862165-21861889 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 188

Conread position: 421-540
Cow position: chrX:11844855-11844737 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 421-547
Cow position: chrX:4794999-4794873 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 421-695
Cow position: chrX:13648275-13648001 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 237

Conread position: 421-696
Cow position: chrX:626532-626261 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 421-696
Cow position: chrX:5599469-5599194 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 238

Conread position: 421-696
Cow position: chrX:24969307-24969032 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 237

Conread position: 421-696
Cow position: chrX:29864922-29864647 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 244

Conread position: 422-693
Cow position: chrX:1654998-1655261 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 422-693
Cow position: chrX:15591112-15591386 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 86

Conread position: 424-662
Cow position: chrX:38840362-38840605 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 123, 9

Conread position: 427-661
Cow position: chrX:25425648-25425887 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 121, 222

Conread position: 427-663
Cow position: chrX:11455552-11455318 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 427-664
Cow position: chrX:28214849-28215091 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 87

Conread position: 427-680
Cow position: chrX:47243790-47243535 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 156

Conread position: 428-659
Cow position: chrX:29859431-29859199 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 222, 0

Conread position: 428-683
Cow position: chrX:42841542-42841284 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 131, 39

Conread position: 428-696
Cow position: chrX:27760857-27761124 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 243, 79

Conread position: 428-696
Cow position: chrX:32094935-32094666 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 238

Conread position: 428-696
Cow position: chrX:37403507-37403239 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 230

Conread position: 429-544
Cow position: chrX:26492677-26492562 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 430-690
Cow position: chrX:14974220-14973954 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 86, 232

Conread position: 433-577
Cow position: chrX:777035-777180 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 433-600
Cow position: chrX:18551427-18551594 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 433-670
Cow position: chrX:42381908-42381671 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 99

Conread position: 433-690
Cow position: chrX:31385238-31385493 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 64, 235

Conread position: 433-693
Cow position: chrX:21319213-21319477 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 115, 192

Conread position: 433-696
Cow position: chrX:15596573-15596822 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 238, 62

Conread position: 433-696
Cow position: chrX:43510937-43511203 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 167, 229

Conread position: 434-660
Cow position: chrX:15379896-15380133 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 434-664
Cow position: chrX:38705083-38705320 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 104, 206

Conread position: 434-686
Cow position: chrX:26845027-26845286 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 92, 239

Conread position: 434-690
Cow position: chrX:16713719-16713975 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 67

Conread position: 434-690
Cow position: chrX:42294623-42294885 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 434-696
Cow position: chrX:17969334-17969064 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 240

Conread position: 434-696
Cow position: chrX:18695403-18695137 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 60

Conread position: 434-696
Cow position: chrX:24193639-24193893 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 434-696
Cow position: chrX:28666453-28666186 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 116, 64

Conread position: 434-696
Cow position: chrX:44086826-44087088 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 435-693
Cow position: chrX:36219059-36219314 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 436-688
Cow position: chrX:28855020-28855274 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 45

Conread position: 436-696
Cow position: chrX:17794517-17794769 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 225

Conread position: 436-696
Cow position: chrX:48287907-48287656 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 236, 120

Conread position: 437-647
Cow position: chrX:33799423-33799629 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 437-690
Cow position: chrX:16706324-16706580 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 52, 64

Conread position: 437-695
Cow position: chrX:5127454-5127701 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 118, 53

Conread position: 437-695
Cow position: chrX:13868230-13868477 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 143, 53

Conread position: 437-695
Cow position: chrX:34169056-34168794 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 226

Conread position: 438-696
Cow position: chrX:35633225-35632970 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 11

Conread position: 438-696
Cow position: chrX:47607942-47608198 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 22

Conread position: 439-695
Cow position: chrX:6652541-6652289 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 232, 21

Conread position: 440-663
Cow position: chrX:28516308-28516083 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 36

Conread position: 440-693
Cow position: chrX:31342726-31342967 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 64

Conread position: 440-694
Cow position: chrX:41306106-41305847 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 108, 223

Conread position: 440-696
Cow position: chrX:27516065-27516316 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 440-696
Cow position: chrX:48243923-48243668 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 231, 54

Conread position: 441-607
Cow position: chrX:21794463-21794624 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 441-647
Cow position: chrX:30729969-30729761 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 5

Conread position: 441-663
Cow position: chrX:22623981-22624207 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 116, 0

Conread position: 441-696
Cow position: chrX:1781432-1781689 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 219

Conread position: 442-693
Cow position: chrX:39288645-39288387 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 231

Conread position: 442-696
Cow position: chrX:40180341-40180087 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 217

Conread position: 442-696
Cow position: chrX:47654834-47655088 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 221

Conread position: 443-696
Cow position: chrX:28058263-28058011 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 47

Conread position: 444-662
Cow position: chrX:24260081-24259857 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 444-696
Cow position: chrX:23299487-23299738 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 129

Conread position: 444-696
Cow position: chrX:38067181-38066929 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 221

Conread position: 445-690
Cow position: chrX:32128461-32128216 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 226, 213

Conread position: 446-696
Cow position: chrX:11672318-11672565 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 225, 15

Conread position: 447-681
Cow position: chrX:27679886-27680128 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 96, 222

Conread position: 448-682
Cow position: chrX:1134333-1134571 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 19

Conread position: 449-617
Cow position: chrX:42281934-42282109 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 124

Conread position: 449-663
Cow position: chrX:23696886-23696664 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 183

Conread position: 450-693
Cow position: chrX:24169782-24169534 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 95, 138

Conread position: 450-696
Cow position: chrX:917839-917585 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 220

Conread position: 452-689
Cow position: chrX:11377109-11377350 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 185

Conread position: 452-696
Cow position: chrX:7311533-7311777 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 219, 206

Conread position: 452-696
Cow position: chrX:11663718-11663962 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 206

Conread position: 452-696
Cow position: chrX:27019745-27019987 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 101, 123

Conread position: 452-696
Cow position: chrX:30981628-30981381 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 43, 90

Conread position: 452-696
Cow position: chrX:34285524-34285279 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 207

Conread position: 452-696
Cow position: chrX:34413316-34413560 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 206

Conread position: 453-696
Cow position: chrX:27626896-27627139 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 205

Conread position: 453-696
Cow position: chrX:28555894-28555651 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 218, 205

Conread position: 454-696
Cow position: chrX:24288371-24288132 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 209, 0

Conread position: 454-696
Cow position: chrX:42530364-42530127 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 455-696
Cow position: chrX:13922985-13923211 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 216, 42

Conread position: 455-696
Cow position: chrX:45501687-45501932 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 212

Conread position: 456-680
Cow position: chrX:24200739-24200965 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 85, 122

Conread position: 456-696
Cow position: chrX:6655722-6655483 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 8

Conread position: 458-696
Cow position: chrX:16222172-16222409 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 213, 156

Conread position: 458-696
Cow position: chrX:47219710-47219471 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 206

Conread position: 460-657
Cow position: chrX:10438104-10437905 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 0

Conread position: 460-663
Cow position: chrX:30764097-30763889 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 11

Conread position: 461-676
Cow position: chrX:27070318-27070105 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 37

Conread position: 461-678
Cow position: chrX:45566157-45566374 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 210, 202

Conread position: 461-696
Cow position: chrX:7444633-7444868 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 197

Conread position: 461-696
Cow position: chrX:8899574-8899808 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 99

Conread position: 461-696
Cow position: chrX:23564248-23564013 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 211, 204

Conread position: 461-696
Cow position: chrX:38094976-38094741 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 204

Conread position: 462-677
Cow position: chrX:3130116-3130329 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 209, 28

Conread position: 462-696
Cow position: chrX:1947171-1946937 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 463-627
Cow position: chrX:19210844-19210675 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 27

Conread position: 463-670
Cow position: chrX:39015607-39015406 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 463-680
Cow position: chrX:41884885-41884670 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 463-695
Cow position: chrX:18118920-18118689 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 208, 107

Conread position: 463-696
Cow position: chrX:13396698-13396468 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 208, 13

Conread position: 464-676
Cow position: chrX:19022979-19023189 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 153, 0

Conread position: 464-682
Cow position: chrX:43075521-43075752 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 24

Conread position: 464-696
Cow position: chrX:2945318-2945084 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 464-696
Cow position: chrX:13686270-13686499 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 207, 16

Conread position: 464-696
Cow position: chrX:42222016-42221784 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 199

Conread position: 465-626
Cow position: chrX:20709586-20709752 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 25

Conread position: 466-696
Cow position: chrX:21666037-21665809 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 183, 0

Conread position: 467-682
Cow position: chrX:1729020-1728799 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 17

Conread position: 467-695
Cow position: chrX:160484-160250 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 81, 28

Conread position: 467-695
Cow position: chrX:38936247-38936484 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 75, 23

Conread position: 467-696
Cow position: chrX:36692794-36693019 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 204, 91

Conread position: 467-696
Cow position: chrX:37575865-37576100 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 127

Conread position: 468-657
Cow position: chrX:4044302-4044113 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 468-696
Cow position: chrX:7742901-7742673 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 203, 190

Conread position: 468-696
Cow position: chrX:17980151-17980379 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 203, 190

Conread position: 469-664
Cow position: chrX:40035912-40035719 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 469-687
Cow position: chrX:24886929-24886717 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 202, 18

Conread position: 470-696
Cow position: chrX:28847324-28847095 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 78, 199

Conread position: 472-696
Cow position: chrX:13384967-13385191 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 199, 186

Conread position: 472-696
Cow position: chrX:23139873-23140094 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 199, 168

Conread position: 473-695
Cow position: chrX:20888085-20887861 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 187

Conread position: 474-696
Cow position: chrX:5017842-5017624 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 476-695
Cow position: chrX:37231976-37232192 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 10

Conread position: 476-696
Cow position: chrX:40515470-40515684 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 8

Conread position: 478-662
Cow position: chrX:42247609-42247426 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 44

Conread position: 479-696
Cow position: chrX:12096679-12096463 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 193, 105

Conread position: 479-696
Cow position: chrX:13447837-13448054 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 192, 179

Conread position: 479-696
Cow position: chrX:24809403-24809186 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 192, 179

Conread position: 479-696
Cow position: chrX:42171731-42171515 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 11

Conread position: 481-690
Cow position: chrX:6562-6780 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 101

Conread position: 483-653
Cow position: chrX:16689102-16689272 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 483-696
Cow position: chrX:34192253-34192461 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 43

Conread position: 484-677
Cow position: chrX:31338511-31338707 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 120

Conread position: 484-696
Cow position: chrX:20321195-20320983 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 188, 175

Conread position: 484-696
Cow position: chrX:26441208-26440996 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 181, 187

Conread position: 484-696
Cow position: chrX:46579283-46579071 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 187, 174

Conread position: 485-677
Cow position: chrX:16284407-16284211 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 184

Conread position: 485-695
Cow position: chrX:11975914-11975704 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 187, 174

Conread position: 485-696
Cow position: chrX:28133922-28134130 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 178, 0

Conread position: 485-696
Cow position: chrX:36840434-36840657 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 486-612
Cow position: chrX:11590048-11589923 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 486-696
Cow position: chrX:3079013-3078803 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 185, 172

Conread position: 487-677
Cow position: chrX:38641776-38641960 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 487-680
Cow position: chrX:20167728-20167922 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 169

Conread position: 488-696
Cow position: chrX:24102556-24102763 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 183, 20

Conread position: 488-696
Cow position: chrX:25966626-25966840 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 7

Conread position: 488-696
Cow position: chrX:34376534-34376741 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 112, 14

Conread position: 488-696
Cow position: chrX:39556239-39556033 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 183, 26

Conread position: 490-662
Cow position: chrX:41682933-41683111 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 490-663
Cow position: chrX:19019517-19019341 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 490-663
Cow position: chrX:45448234-45448407 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 490-680
Cow position: chrX:21626382-21626197 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 158

Conread position: 490-689
Cow position: chrX:37544520-37544724 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 87

Conread position: 490-690
Cow position: chrX:14599114-14599311 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 181, 115

Conread position: 490-691
Cow position: chrX:6654739-6654537 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 59, 152

Conread position: 490-694
Cow position: chrX:10916326-10916536 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 490-694
Cow position: chrX:19674226-19674430 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 181, 168

Conread position: 490-694
Cow position: chrX:30134910-30134704 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 174, 0

Conread position: 490-696
Cow position: chrX:15486047-15485844 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 81

Conread position: 490-696
Cow position: chrX:23047358-23047564 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 181, 168

Conread position: 490-696
Cow position: chrX:38967229-38967434 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 122, 160

Conread position: 490-696
Cow position: chrX:48370673-48370880 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 66, 169

Conread position: 491-696
Cow position: chrX:14134760-14134965 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 180, 167

Conread position: 491-696
Cow position: chrX:19495381-19495176 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 180, 167

Conread position: 492-682
Cow position: chrX:32419770-32419956 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 8

Conread position: 492-689
Cow position: chrX:1616477-1616274 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 59, 176

Conread position: 493-660
Cow position: chrX:19772038-19771869 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 493-662
Cow position: chrX:44839762-44839932 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 493-696
Cow position: chrX:23034471-23034680 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 179

Conread position: 493-696
Cow position: chrX:38442543-38442746 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 178, 165

Conread position: 495-693
Cow position: chrX:15341449-15341256 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 150, 42

Conread position: 496-695
Cow position: chrX:10992203-10992401 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 175, 5

Conread position: 498-689
Cow position: chrX:48248405-48248600 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 60, 92

Conread position: 498-695
Cow position: chrX:4473999-4474192 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 498-696
Cow position: chrX:19540769-19540564 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 175

Conread position: 499-682
Cow position: chrX:6277874-6277686 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 91

Conread position: 499-696
Cow position: chrX:36373130-36373328 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 15, 160

Conread position: 500-696
Cow position: chrX:5856929-5856728 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 20

Conread position: 500-696
Cow position: chrX:11581525-11581718 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 171, 88

Conread position: 500-696
Cow position: chrX:21495346-21495542 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 171, 158

Conread position: 500-696
Cow position: chrX:22284096-22284301 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 500-696
Cow position: chrX:32010619-32010815 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 171, 158

Conread position: 500-696
Cow position: chrX:34006901-34007097 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 158

Conread position: 500-696
Cow position: chrX:38577120-38577316 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 181

Conread position: 501-624
Cow position: chrX:48021002-48020878 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 501-637
Cow position: chrX:16416051-16416192 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 33

Conread position: 501-670
Cow position: chrX:14050395-14050563 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 157, 0

Conread position: 501-696
Cow position: chrX:40581576-40581776 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 15

Conread position: 502-622
Cow position: chrX:42242883-42242764 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 502-658
Cow position: chrX:28878665-28878508 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 54

Conread position: 502-682
Cow position: chrX:4943417-4943234 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 164

Conread position: 502-696
Cow position: chrX:8796841-8797032 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 502-696
Cow position: chrX:40106101-40105902 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 502-696
Cow position: chrX:48224598-48224402 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 162

Conread position: 504-654
Cow position: chrX:4177649-4177798 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 504-696
Cow position: chrX:23583150-23583342 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 167, 154

Conread position: 505-677
Cow position: chrX:7341397-7341573 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 24

Conread position: 505-696
Cow position: chrX:15504884-15505075 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 166, 153

Conread position: 506-691
Cow position: chrX:25568785-25568598 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 145, 0

Conread position: 506-696
Cow position: chrX:2362093-2362283 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 165, 152

Conread position: 506-696
Cow position: chrX:2499745-2499556 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 165, 23

Conread position: 506-696
Cow position: chrX:14409794-14409603 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 154

Conread position: 506-696
Cow position: chrX:16529599-16529789 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 166, 157

Conread position: 506-696
Cow position: chrX:25452144-25452333 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 165, 108

Conread position: 506-696
Cow position: chrX:39174619-39174429 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 166, 159

Conread position: 507-693
Cow position: chrX:19807310-19807504 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 507-696
Cow position: chrX:42142038-42141844 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 157

Conread position: 508-694
Cow position: chrX:15590276-15590090 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 164, 157

Conread position: 508-696
Cow position: chrX:12810710-12810904 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 164

Conread position: 509-681
Cow position: chrX:6413643-6413813 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 154, 0

Conread position: 509-696
Cow position: chrX:10495830-10496017 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 162, 149

Conread position: 509-696
Cow position: chrX:12776389-12776202 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 163, 150

Conread position: 509-696
Cow position: chrX:44557676-44557863 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 162, 149

Conread position: 509-696
Cow position: chrX:45467623-45467436 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 163, 150

Conread position: 510-680
Cow position: chrX:33519177-33519347 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 161, 153

Conread position: 510-681
Cow position: chrX:15344019-15344196 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 153

Conread position: 510-693
Cow position: chrX:30543689-30543501 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 19

Conread position: 510-696
Cow position: chrX:7054134-7053952 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 510-696
Cow position: chrX:10831914-10831728 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 510-696
Cow position: chrX:29723049-29723235 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 162, 155

Conread position: 510-696
Cow position: chrX:43730592-43730408 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 162, 41

Conread position: 510-696
Cow position: chrX:44737393-44737207 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 511-687
Cow position: chrX:31450021-31449847 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 511-690
Cow position: chrX:15147582-15147408 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 511-695
Cow position: chrX:19196919-19196735 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 160, 147

Conread position: 511-696
Cow position: chrX:9593536-9593351 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 160, 147

Conread position: 511-696
Cow position: chrX:22821013-22821198 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 512-662
Cow position: chrX:37205313-37205469 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 512-685
Cow position: chrX:17010702-17010529 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 159, 146

Conread position: 513-695
Cow position: chrX:126386-126575 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 513-696
Cow position: chrX:21749857-21749675 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 158, 102

Conread position: 513-696
Cow position: chrX:32584210-32584029 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 158, 50

Conread position: 514-696
Cow position: chrX:23024305-23024487 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 169

Conread position: 514-696
Cow position: chrX:32978655-32978472 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 155, 149

Conread position: 516-690
Cow position: chrX:12671883-12671709 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 156, 149

Conread position: 516-694
Cow position: chrX:43199036-43199217 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 24

Conread position: 516-696
Cow position: chrX:20617193-20617013 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 141

Conread position: 516-696
Cow position: chrX:40602568-40602748 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 155, 142

Conread position: 517-696
Cow position: chrX:5112951-5112772 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 154, 141

Conread position: 517-696
Cow position: chrX:15561210-15561031 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 154, 141

Conread position: 519-696
Cow position: chrX:25741507-25741330 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 152, 139

Conread position: 520-692
Cow position: chrX:22325680-22325857 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 77

Conread position: 521-680
Cow position: chrX:27288139-27287975 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 155

Conread position: 521-696
Cow position: chrX:34401607-34401781 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 150, 112

Conread position: 522-696
Cow position: chrX:25946232-25946053 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 154

Conread position: 522-696
Cow position: chrX:38218328-38218499 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 141, 0

Conread position: 523-692
Cow position: chrX:25419553-25419381 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 144

Conread position: 523-696
Cow position: chrX:5739602-5739429 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 149, 136

Conread position: 523-696
Cow position: chrX:21062828-21063000 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 149, 99

Conread position: 524-696
Cow position: chrX:2300537-2300717 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 524-696
Cow position: chrX:43979230-43979402 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 147, 133

Conread position: 525-695
Cow position: chrX:32188746-32188576 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 146, 138

Conread position: 526-696
Cow position: chrX:23235444-23235614 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 145, 132

Conread position: 527-696
Cow position: chrX:37497832-37497663 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 145, 132

Conread position: 528-696
Cow position: chrX:16722201-16722018 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 152

Conread position: 529-696
Cow position: chrX:19290389-19290556 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 142, 134

Conread position: 529-696
Cow position: chrX:31373195-31373358 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 142, 112

Conread position: 530-696
Cow position: chrX:21795115-21795280 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 532-696
Cow position: chrX:16289942-16289778 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 140, 130

Conread position: 533-670
Cow position: chrX:33855619-33855484 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 533-696
Cow position: chrX:17691882-17692044 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 52

Conread position: 533-696
Cow position: chrX:41743534-41743697 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 139, 122

Conread position: 534-696
Cow position: chrX:25035764-25035603 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 0

Conread position: 535-663
Cow position: chrX:41198709-41198837 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 535-696
Cow position: chrX:7509760-7509921 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 123

Conread position: 536-662
Cow position: chrX:6262806-6262681 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 536-696
Cow position: chrX:9096291-9096451 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 135, 127

Conread position: 537-680
Cow position: chrX:1514799-1514658 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 24

Conread position: 538-696
Cow position: chrX:11718152-11717996 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 133, 49

Conread position: 538-696
Cow position: chrX:11844612-11844457 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 125, 0

Conread position: 538-696
Cow position: chrX:12179594-12179752 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 133, 125

Conread position: 538-696
Cow position: chrX:40648292-40648447 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 125, 0

Conread position: 539-696
Cow position: chrX:20697977-20697824 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 121

Conread position: 542-696
Cow position: chrX:5118853-5118701 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 94, 122

Conread position: 542-696
Cow position: chrX:31250022-31250176 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 72

Conread position: 543-696
Cow position: chrX:35803443-35803598 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 117

Conread position: 546-695
Cow position: chrX:11806383-11806234 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 5, 84

Conread position: 551-696
Cow position: chrX:11614360-11614505 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 112

Conread position: 555-696
Cow position: chrX:23080940-23081077 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 117, 19

Conread position: 556-696
Cow position: chrX:22567177-22567316 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 13

Conread position: 560-696
Cow position: chrX:20029895-20030031 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 103

Conread position: 561-680
Cow position: chrX:10394292-10394411 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 110, 102

Conread position: 561-685
Cow position: chrX:9227335-9227211 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 105

Conread position: 561-690
Cow position: chrX:1823711-1823840 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 110, 97

Conread position: 561-691
Cow position: chrX:28787020-28787145 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 561-694
Cow position: chrX:40321276-40321411 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 561-696
Cow position: chrX:6828784-6828920 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 98

Conread position: 561-696
Cow position: chrX:10718159-10718294 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 98

Conread position: 561-696
Cow position: chrX:11583494-11583362 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 13

Conread position: 561-696
Cow position: chrX:14009004-14008869 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 97

Conread position: 561-696
Cow position: chrX:14846425-14846290 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 97

Conread position: 561-696
Cow position: chrX:15577992-15577857 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 98

Conread position: 561-696
Cow position: chrX:27982496-27982361 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 561-696
Cow position: chrX:30863550-30863415 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 97

Conread position: 561-696
Cow position: chrX:34333551-34333416 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 98

Conread position: 561-696
Cow position: chrX:36240044-36240179 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 97

Conread position: 561-696
Cow position: chrX:38667985-38667849 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 118

Conread position: 561-696
Cow position: chrX:39386616-39386482 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 561-696
Cow position: chrX:39548979-39549114 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 97

Conread position: 561-696
Cow position: chrX:39731162-39731297 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 97

Conread position: 561-696
Cow position: chrX:48205264-48205129 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 111, 104

Conread position: 561-696
Cow position: chrX:48328738-48328603 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 97

Conread position: 562-696
Cow position: chrX:5292241-5292103 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 562-696
Cow position: chrX:20038568-20038434 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 110, 97

Conread position: 562-696
Cow position: chrX:39954888-39954754 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 96

Conread position: 562-696
Cow position: chrX:43767887-43767753 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 108, 96

Conread position: 563-696
Cow position: chrX:11860591-11860458 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 95

Conread position: 563-696
Cow position: chrX:29877530-29877397 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 95

Conread position: 563-696
Cow position: chrX:30538501-30538368 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 95

Conread position: 563-696
Cow position: chrX:30899737-30899603 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 96

Conread position: 563-696
Cow position: chrX:30950179-30950312 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 95

Conread position: 563-696
Cow position: chrX:36479583-36479716 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 95

Conread position: 563-696
Cow position: chrX:36820581-36820448 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 95

Conread position: 563-696
Cow position: chrX:48165174-48165307 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 95

Conread position: 564-693
Cow position: chrX:29048685-29048810 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 564-696
Cow position: chrX:21844286-21844419 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 99

Conread position: 564-696
Cow position: chrX:31436132-31436264 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 564-696
Cow position: chrX:37299244-37299380 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 111

Conread position: 565-676
Cow position: chrX:21666426-21666313 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 102

Conread position: 565-694
Cow position: chrX:46771319-46771190 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 98

Conread position: 565-694
Cow position: chrX:47967253-47967381 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 565-695
Cow position: chrX:37843373-37843503 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 100

Conread position: 565-696
Cow position: chrX:7381977-7382107 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 58

Conread position: 565-696
Cow position: chrX:17271635-17271505 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 18

Conread position: 565-696
Cow position: chrX:20945221-20945352 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 93

Conread position: 565-696
Cow position: chrX:22873050-22873182 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 565-696
Cow position: chrX:25232239-25232374 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 565-696
Cow position: chrX:32012403-32012273 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 100

Conread position: 566-696
Cow position: chrX:32747312-32747442 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 97

Conread position: 567-696
Cow position: chrX:18999553-18999682 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 96

Conread position: 570-696
Cow position: chrX:40558018-40557892 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 102, 95

Conread position: 571-682
Cow position: chrX:6487659-6487770 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 87

Conread position: 572-696
Cow position: chrX:23215767-23215891 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 86

Conread position: 572-696
Cow position: chrX:24758037-24757913 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 99, 86

Conread position: 572-696
Cow position: chrX:24966929-24967053 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 86

Conread position: 572-696
Cow position: chrX:26754125-26754001 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 574-696
Cow position: chrX:15545559-15545681 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 89

Conread position: 580-696
Cow position: chrX:16783162-16783278 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 78

Conread position: 584-696
Cow position: chrX:23452926-23452814 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 74

Conread position: 585-696
Cow position: chrX:2425449-2425338 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 80

Conread position: 585-696
Cow position: chrX:7645931-7646042 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 77

Conread position: 585-696
Cow position: chrX:8103420-8103309 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 80

Conread position: 585-696
Cow position: chrX:29083798-29083906 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 586-696
Cow position: chrX:29844802-29844692 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 72

Conread position: 587-696
Cow position: chrX:27458930-27459039 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 84, 76

Show alignments to all cow chromosomes.