Cow genome map

Conread name: Ss1.1-Pig3-SRG8019O09.5

Conread position: 53-240
Cow position: chr17:1311610-1311424 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 34

Conread position: 53-271
Cow position: chr17:42313036-42313254 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 53-274
Cow position: chr17:2583544-2583760 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 92, 0

Conread position: 53-325
Cow position: chr17:37415736-37415469 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 206, 106

Conread position: 53-350
Cow position: chr17:4635623-4635342 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 53-355
Cow position: chr17:17221465-17221762 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 124

Conread position: 53-373
Cow position: chr17:6071692-6072011 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 200

Conread position: 53-379
Cow position: chr17:24026831-24026507 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 125

Conread position: 53-380
Cow position: chr17:184299-184627 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-380
Cow position: chr17:4211081-4211412 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 53-380
Cow position: chr17:8222857-8223186 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 53-380
Cow position: chr17:14242978-14243312 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 110

Conread position: 53-380
Cow position: chr17:15853887-15854213 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 231

Conread position: 53-381
Cow position: chr17:2201449-2201778 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-381
Cow position: chr17:4063490-4063809 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 159

Conread position: 53-381
Cow position: chr17:16903731-16904060 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-381
Cow position: chr17:18099922-18099596 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 0

Conread position: 53-386
Cow position: chr17:29471589-29471916 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 105

Conread position: 54-381
Cow position: chr17:731339-731017 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 59

Conread position: 57-380
Cow position: chr17:18777674-18777356 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 132

Conread position: 57-380
Cow position: chr17:20225758-20226081 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 209

Conread position: 57-381
Cow position: chr17:25739452-25739777 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 0

Conread position: 60-250
Cow position: chr17:28772452-28772262 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 154

Conread position: 63-380
Cow position: chr17:19215243-19214930 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 42

Conread position: 64-380
Cow position: chr17:40908724-40908420 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 43

Conread position: 65-350
Cow position: chr17:41243280-41243564 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 63

Conread position: 65-355
Cow position: chr17:18892828-18893113 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 75

Conread position: 65-380
Cow position: chr17:7802677-7802379 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 292, 30

Conread position: 65-380
Cow position: chr17:41898836-41898535 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 291, 11

Conread position: 65-381
Cow position: chr17:29083341-29083645 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 74

Conread position: 65-385
Cow position: chr17:8351660-8351987 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 7

Conread position: 66-320
Cow position: chr17:17128172-17128423 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 66-336
Cow position: chr17:44482014-44482286 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 28

Conread position: 66-346
Cow position: chr17:20083265-20082992 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 84

Conread position: 66-380
Cow position: chr17:8212224-8212534 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 16

Conread position: 66-380
Cow position: chr17:43471424-43471111 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 7

Conread position: 68-298
Cow position: chr17:16416913-16416676 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 178, 160

Conread position: 68-303
Cow position: chr17:23041747-23041976 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 68-365
Cow position: chr17:4608450-4608745 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 8

Conread position: 68-367
Cow position: chr17:9752952-9753251 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 81

Conread position: 68-368
Cow position: chr17:34567970-34568270 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 259

Conread position: 68-378
Cow position: chr17:20091445-20091147 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 7

Conread position: 68-379
Cow position: chr17:18785587-18785886 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 141, 77

Conread position: 68-379
Cow position: chr17:20703033-20702737 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 25

Conread position: 68-380
Cow position: chr17:158454-158757 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 29

Conread position: 68-380
Cow position: chr17:3315253-3315560 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 113

Conread position: 68-380
Cow position: chr17:3414545-3414850 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 36, 73

Conread position: 68-380
Cow position: chr17:7615512-7615211 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 36

Conread position: 68-380
Cow position: chr17:23321253-23320940 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 0

Conread position: 68-381
Cow position: chr17:20078511-20078198 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 149

Conread position: 68-383
Cow position: chr17:11587921-11587622 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 120

Conread position: 69-378
Cow position: chr17:241464-241764 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 6

Conread position: 69-379
Cow position: chr17:654649-654345 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 129, 6

Conread position: 69-379
Cow position: chr17:22134364-22134674 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 99

Conread position: 69-379
Cow position: chr17:35018515-35018813 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 47

Conread position: 69-379
Cow position: chr17:43227502-43227803 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 121, 6

Conread position: 69-381
Cow position: chr17:22774295-22773977 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 70-268
Cow position: chr17:4085236-4085430 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 70-327
Cow position: chr17:13180684-13180940 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 100

Conread position: 72-178
Cow position: chr17:18421556-18421662 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 72-184
Cow position: chr17:15140168-15140056 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 72-198
Cow position: chr17:1877852-1877726 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 72-198
Cow position: chr17:14871854-14871980 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 72-229
Cow position: chr17:12290316-12290158 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 72-231
Cow position: chr17:2521269-2521110 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 72-236
Cow position: chr17:29897811-29897970 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 37

Conread position: 72-240
Cow position: chr17:138779-138941 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 72-242
Cow position: chr17:39629815-39629642 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 134

Conread position: 72-243
Cow position: chr17:29950383-29950554 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 72-250
Cow position: chr17:2698726-2698902 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 64, 77

Conread position: 72-250
Cow position: chr17:15708822-15708644 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 72-262
Cow position: chr17:21304460-21304647 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 170, 0

Conread position: 72-286
Cow position: chr17:9001499-9001706 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 201, 45

Conread position: 72-295
Cow position: chr17:18324233-18324024 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 158, 33

Conread position: 72-297
Cow position: chr17:30182409-30182185 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 72-321
Cow position: chr17:21770851-21771100 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 72-323
Cow position: chr17:29041730-29041483 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 189, 72

Conread position: 72-324
Cow position: chr17:1672469-1672720 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 72-344
Cow position: chr17:3780827-3781093 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 33

Conread position: 72-344
Cow position: chr17:38829053-38829321 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 15

Conread position: 72-349
Cow position: chr17:1654593-1654316 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 143

Conread position: 72-354
Cow position: chr17:25551523-25551256 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 128, 0

Conread position: 72-355
Cow position: chr17:1457208-1456926 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 21

Conread position: 72-359
Cow position: chr17:14029176-14028888 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 121

Conread position: 72-359
Cow position: chr17:19369612-19369907 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 43

Conread position: 72-363
Cow position: chr17:19133646-19133369 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 87, 67

Conread position: 72-366
Cow position: chr17:43443318-43443024 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 279, 250

Conread position: 72-371
Cow position: chr17:23884625-23884339 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 25

Conread position: 72-372
Cow position: chr17:418469-418179 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 284, 114

Conread position: 72-376
Cow position: chr17:12132839-12132531 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 269, 0

Conread position: 72-376
Cow position: chr17:37528801-37528496 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-377
Cow position: chr17:36790236-36790543 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 72-378
Cow position: chr17:2088091-2088392 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 91, 41

Conread position: 72-378
Cow position: chr17:19234940-19235234 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 53, 9

Conread position: 72-378
Cow position: chr17:22233122-22232825 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 40

Conread position: 72-379
Cow position: chr17:50929-50634 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 176, 57

Conread position: 72-379
Cow position: chr17:980014-979709 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 252

Conread position: 72-379
Cow position: chr17:2151336-2151624 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 284, 56

Conread position: 72-379
Cow position: chr17:5380122-5380422 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 128

Conread position: 72-379
Cow position: chr17:8994169-8993862 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 245

Conread position: 72-379
Cow position: chr17:13990095-13989788 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 127

Conread position: 72-379
Cow position: chr17:15335268-15334976 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 106

Conread position: 72-379
Cow position: chr17:17957768-17958075 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 194

Conread position: 72-379
Cow position: chr17:20695352-20695657 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 33, 58

Conread position: 72-379
Cow position: chr17:23337877-23337581 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 73

Conread position: 72-379
Cow position: chr17:38991923-38992231 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:453017-453320 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 102

Conread position: 72-380
Cow position: chr17:1970322-1970631 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:2179018-2179308 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 284, 14

Conread position: 72-380
Cow position: chr17:2244895-2244593 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 33

Conread position: 72-380
Cow position: chr17:2265359-2265668 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:3652556-3652247 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:4480711-4480403 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 40

Conread position: 72-380
Cow position: chr17:5638717-5638412 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 149

Conread position: 72-380
Cow position: chr17:5672345-5672040 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 149

Conread position: 72-380
Cow position: chr17:5806318-5806009 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:6122954-6123263 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:6612193-6612502 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:6955810-6956119 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:10285716-10285413 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 73

Conread position: 72-380
Cow position: chr17:10843432-10843753 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 72-380
Cow position: chr17:14212847-14212540 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 76

Conread position: 72-380
Cow position: chr17:15094291-15093982 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:15117988-15118296 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 170

Conread position: 72-380
Cow position: chr17:15438962-15439271 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:15558743-15559052 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:16216606-16216910 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 33

Conread position: 72-380
Cow position: chr17:16505576-16505266 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:16854927-16854628 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 183

Conread position: 72-380
Cow position: chr17:18814326-18814627 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 78

Conread position: 72-380
Cow position: chr17:19406141-19405829 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 142, 55

Conread position: 72-380
Cow position: chr17:20215253-20215560 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 153

Conread position: 72-380
Cow position: chr17:20390945-20391254 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:20546308-20546617 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:21716633-21716942 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:21860641-21860337 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 284, 51

Conread position: 72-380
Cow position: chr17:22249081-22248772 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:23722784-23723087 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 26

Conread position: 72-380
Cow position: chr17:25834588-25834897 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:26829573-26829264 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:27791611-27791312 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 33

Conread position: 72-380
Cow position: chr17:29824791-29824480 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 72-380
Cow position: chr17:30413139-30413433 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 64, 77

Conread position: 72-380
Cow position: chr17:31781300-31781000 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 117

Conread position: 72-380
Cow position: chr17:31987029-31986721 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 133

Conread position: 72-380
Cow position: chr17:34236080-34235771 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:36284438-36284747 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:36817047-36817346 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 9

Conread position: 72-380
Cow position: chr17:39824023-39823714 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chr17:40282181-40282480 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 114

Conread position: 72-380
Cow position: chr17:41893219-41892900 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 40

Conread position: 72-381
Cow position: chr17:254268-254574 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 71

Conread position: 72-381
Cow position: chr17:1569049-1568741 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 147

Conread position: 72-381
Cow position: chr17:2177151-2177451 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 71

Conread position: 72-381
Cow position: chr17:2839193-2839493 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 105

Conread position: 72-381
Cow position: chr17:3305747-3306066 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 194

Conread position: 72-381
Cow position: chr17:8449882-8450191 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 134

Conread position: 72-381
Cow position: chr17:11083964-11083658 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 261

Conread position: 72-381
Cow position: chr17:11913578-11913270 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 174

Conread position: 72-381
Cow position: chr17:15328452-15328761 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 205

Conread position: 72-381
Cow position: chr17:15351216-15351531 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 115, 25

Conread position: 72-381
Cow position: chr17:16447311-16447001 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 302

Conread position: 72-381
Cow position: chr17:20084639-20084340 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 85

Conread position: 72-381
Cow position: chr17:20093988-20093683 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 76

Conread position: 72-381
Cow position: chr17:22563315-22563621 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 67

Conread position: 72-381
Cow position: chr17:24312297-24312604 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 149, 113

Conread position: 72-381
Cow position: chr17:24785361-24785671 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-381
Cow position: chr17:29156544-29156862 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 72-381
Cow position: chr17:29212803-29213104 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 102

Conread position: 72-381
Cow position: chr17:33792246-33792559 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 22

Conread position: 72-381
Cow position: chr17:38701045-38701337 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 283, 67

Conread position: 72-381
Cow position: chr17:40801923-40802246 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 34

Conread position: 72-383
Cow position: chr17:588873-588563 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 134, 13

Conread position: 72-383
Cow position: chr17:13674314-13674023 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 113, 66

Conread position: 72-383
Cow position: chr17:13725435-13725745 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 142

Conread position: 72-383
Cow position: chr17:15809158-15809471 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 72-383
Cow position: chr17:21767065-21767382 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 37

Conread position: 72-383
Cow position: chr17:21814191-21814493 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 284, 15

Conread position: 72-385
Cow position: chr17:21217115-21216813 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 283, 116

Conread position: 72-385
Cow position: chr17:35548152-35547845 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 74, 97

Conread position: 72-393
Cow position: chr17:16463976-16463668 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 284, 67

Conread position: 72-394
Cow position: chr17:18591592-18591895 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 67

Conread position: 73-235
Cow position: chr17:32407512-32407350 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 73-250
Cow position: chr17:18198526-18198703 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 73-351
Cow position: chr17:37701122-37701398 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 73-379
Cow position: chr17:21185131-21184847 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 43

Conread position: 73-380
Cow position: chr17:11775587-11775892 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 33

Conread position: 74-359
Cow position: chr17:36159862-36159582 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 164

Conread position: 74-378
Cow position: chr17:12743156-12743446 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 241, 74

Conread position: 74-378
Cow position: chr17:13935973-13935675 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 101, 87

Conread position: 74-378
Cow position: chr17:15701525-15701231 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 282, 65

Conread position: 74-379
Cow position: chr17:11767288-11767594 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 39, 30

Conread position: 74-379
Cow position: chr17:27978277-27978581 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 186, 74

Conread position: 75-326
Cow position: chr17:42258053-42258295 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 76

Conread position: 75-368
Cow position: chr17:13921410-13921708 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 138, 12

Conread position: 75-379
Cow position: chr17:13707879-13708177 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 266, 209

Conread position: 75-380
Cow position: chr17:3550096-3549789 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 182

Conread position: 75-380
Cow position: chr17:12477042-12477345 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 50

Conread position: 75-380
Cow position: chr17:25567373-25567677 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 118

Conread position: 76-240
Cow position: chr17:40810926-40811082 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 76-276
Cow position: chr17:33289801-33289612 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 132

Conread position: 76-313
Cow position: chr17:31232845-31233084 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 174, 216

Conread position: 76-350
Cow position: chr17:1709528-1709802 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 267, 148

Conread position: 76-359
Cow position: chr17:16118291-16118012 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 177

Conread position: 76-359
Cow position: chr17:18123501-18123218 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 73

Conread position: 76-367
Cow position: chr17:14249931-14249642 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 209

Conread position: 76-374
Cow position: chr17:145031-144743 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 90

Conread position: 76-374
Cow position: chr17:13910438-13910145 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 29

Conread position: 76-378
Cow position: chr17:35620327-35620034 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 181, 72

Conread position: 76-379
Cow position: chr17:692447-692148 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 171

Conread position: 76-379
Cow position: chr17:8205126-8205413 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 259, 148

Conread position: 76-379
Cow position: chr17:14006599-14006887 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 57

Conread position: 76-380
Cow position: chr17:148088-148388 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 79

Conread position: 76-380
Cow position: chr17:1708581-1708278 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 11

Conread position: 76-380
Cow position: chr17:16870120-16869819 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 69

Conread position: 76-380
Cow position: chr17:29355876-29355578 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 40

Conread position: 76-380
Cow position: chr17:43991672-43991964 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 39

Conread position: 76-381
Cow position: chr17:6081665-6081969 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 39

Conread position: 76-381
Cow position: chr17:10445339-10445638 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 280, 88

Conread position: 76-381
Cow position: chr17:18340301-18339996 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 46

Conread position: 76-381
Cow position: chr17:20807651-20807957 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 174, 36

Conread position: 76-381
Cow position: chr17:21666173-21666480 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 76-381
Cow position: chr17:36266096-36265801 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 72

Conread position: 76-383
Cow position: chr17:29079541-29079826 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 76-383
Cow position: chr17:36747352-36747039 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 30

Conread position: 77-379
Cow position: chr17:3197454-3197153 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 228

Conread position: 77-380
Cow position: chr17:18721450-18721165 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 122, 0

Conread position: 77-380
Cow position: chr17:20209705-20209395 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 78-256
Cow position: chr17:18471347-18471533 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 78-381
Cow position: chr17:6263032-6263335 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 62

Conread position: 79-381
Cow position: chr17:33934644-33934337 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 233

Conread position: 80-306
Cow position: chr17:15190989-15190770 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 82-354
Cow position: chr17:1883424-1883693 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 100

Conread position: 83-217
Cow position: chr17:16916600-16916466 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 83-381
Cow position: chr17:15228645-15228348 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 7

Conread position: 87-380
Cow position: chr17:29822735-29823028 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 110, 61

Conread position: 89-379
Cow position: chr17:15687371-15687651 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 267, 50

Conread position: 90-359
Cow position: chr17:20272374-20272107 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 215

Conread position: 91-379
Cow position: chr17:22500574-22500865 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 53

Conread position: 91-380
Cow position: chr17:41014358-41014640 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 21

Conread position: 92-377
Cow position: chr17:18265284-18264999 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 134

Conread position: 92-380
Cow position: chr17:12631672-12631397 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 253, 84

Conread position: 96-351
Cow position: chr17:876759-876492 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 98-378
Cow position: chr17:9902585-9902856 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 259, 102

Conread position: 98-378
Cow position: chr17:24293310-24293586 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 198, 148

Conread position: 99-380
Cow position: chr17:20508386-20508107 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 54

Conread position: 99-383
Cow position: chr17:11385654-11385936 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 93

Conread position: 100-379
Cow position: chr17:28862643-28862366 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 157, 132

Conread position: 100-380
Cow position: chr17:6873000-6872727 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 256, 48

Conread position: 101-316
Cow position: chr17:38629327-38629540 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 14

Conread position: 101-380
Cow position: chr17:4298338-4298621 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 36, 48

Conread position: 101-380
Cow position: chr17:40416438-40416161 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 256, 47

Conread position: 101-381
Cow position: chr17:24617984-24618258 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 128

Conread position: 105-381
Cow position: chr17:2534121-2534386 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 38

Conread position: 109-326
Cow position: chr17:20033624-20033832 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 214, 39

Conread position: 109-371
Cow position: chr17:41318962-41318717 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 248, 166

Conread position: 109-373
Cow position: chr17:29075166-29074909 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 109-379
Cow position: chr17:5748633-5748382 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 151, 0

Conread position: 109-380
Cow position: chr17:997968-997700 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 220

Conread position: 109-381
Cow position: chr17:18200930-18201203 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 55

Conread position: 112-380
Cow position: chr17:41121077-41120806 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 107

Conread position: 114-381
Cow position: chr17:8007802-8008062 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 240, 38

Conread position: 115-319
Cow position: chr17:4615097-4615294 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 115-381
Cow position: chr17:15374608-15374863 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 39

Conread position: 115-381
Cow position: chr17:24502721-24502988 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 31

Conread position: 116-373
Cow position: chr17:7699599-7699855 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 73

Conread position: 116-378
Cow position: chr17:922837-923099 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 77

Conread position: 118-380
Cow position: chr17:2033709-2033974 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 119-380
Cow position: chr17:27052626-27052892 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 223, 252

Conread position: 120-381
Cow position: chr17:16320271-16320527 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 121-381
Cow position: chr17:28024666-28024410 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 132

Conread position: 122-380
Cow position: chr17:30565186-30564933 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 38

Conread position: 124-349
Cow position: chr17:22151020-22151244 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 102

Conread position: 125-372
Cow position: chr17:32457234-32456975 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 121, 23

Conread position: 125-380
Cow position: chr17:21181711-21181967 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 0

Conread position: 126-380
Cow position: chr17:31671675-31671420 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 128-300
Cow position: chr17:3156598-3156426 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 128-381
Cow position: chr17:34317551-34317283 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 126, 174

Conread position: 129-365
Cow position: chr17:8617553-8617788 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 55

Conread position: 129-379
Cow position: chr17:24031029-24031279 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 185

Conread position: 129-381
Cow position: chr17:19998322-19998572 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 180

Conread position: 130-381
Cow position: chr17:12357858-12357595 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 116, 77

Conread position: 132-378
Cow position: chr17:3131243-3131485 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 31

Conread position: 133-355
Cow position: chr17:2656831-2657053 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 149
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 45

Conread position: 133-380
Cow position: chr17:34564580-34564826 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 15

Conread position: 134-380
Cow position: chr17:31092443-31092196 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 113, 36

Conread position: 134-381
Cow position: chr17:32162818-32162583 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 135-380
Cow position: chr17:27668466-27668213 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 24

Conread position: 136-381
Cow position: chr17:19342143-19341899 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 48

Conread position: 138-379
Cow position: chr17:20404928-20405156 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 219, 17

Conread position: 139-378
Cow position: chr17:15339505-15339271 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 146, 6

Conread position: 139-381
Cow position: chr17:22237787-22238026 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 58, 21

Conread position: 140-380
Cow position: chr17:3049542-3049780 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 111

Conread position: 140-389
Cow position: chr17:30282029-30281786 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 141-378
Cow position: chr17:22028706-22028947 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 7

Conread position: 141-379
Cow position: chr17:39611800-39612033 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 216, 121

Conread position: 141-379
Cow position: chr17:39747887-39748119 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 213, 100

Conread position: 141-381
Cow position: chr17:5899321-5899093 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 215, 112

Conread position: 142-355
Cow position: chr17:3766590-3766380 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 142-378
Cow position: chr17:44222477-44222711 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 214, 55

Conread position: 145-380
Cow position: chr17:18841137-18840905 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 209, 142

Conread position: 145-382
Cow position: chr17:30698-30926 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 120, 85

Conread position: 148-277
Cow position: chr17:30899194-30899323 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 107

Conread position: 148-378
Cow position: chr17:13916595-13916369 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 70

Conread position: 148-380
Cow position: chr17:16700230-16699997 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 148-380
Cow position: chr17:18315241-18315470 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 208, 110

Conread position: 148-381
Cow position: chr17:2081201-2081431 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 106

Conread position: 148-381
Cow position: chr17:38789054-38788818 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 106

Conread position: 148-381
Cow position: chr17:38800296-38800060 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 106

Conread position: 148-383
Cow position: chr17:29662888-29663118 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 208, 94

Conread position: 150-340
Cow position: chr17:40818482-40818663 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 150-380
Cow position: chr17:8935709-8935484 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 43

Conread position: 151-381
Cow position: chr17:39484760-39484988 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 205, 74

Conread position: 159-344
Cow position: chr17:23279157-23278973 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 93

Conread position: 159-394
Cow position: chr17:3892091-3891858 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 131

Conread position: 160-380
Cow position: chr17:42352631-42352421 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 196, 10

Conread position: 161-351
Cow position: chr17:34733604-34733787 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 161-379
Cow position: chr17:14304481-14304272 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 140, 9

Conread position: 162-381
Cow position: chr17:13717033-13716822 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 140, 33

Conread position: 164-352
Cow position: chr17:18384655-18384470 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 108, 24

Conread position: 164-378
Cow position: chr17:16025523-16025733 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 190, 90

Conread position: 167-380
Cow position: chr17:17478387-17478599 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 168-381
Cow position: chr17:13424522-13424737 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 41

Conread position: 169-383
Cow position: chr17:4920702-4920925 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 172-378
Cow position: chr17:7397018-7396811 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 184, 0

Conread position: 173-387
Cow position: chr17:13495366-13495578 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 71, 7

Conread position: 180-351
Cow position: chr17:38986465-38986295 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 180-381
Cow position: chr17:38616917-38617119 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 176, 0

Conread position: 189-380
Cow position: chr17:20361513-20361326 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 166, 13

Conread position: 192-381
Cow position: chr17:35440505-35440301 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 194-381
Cow position: chr17:15304325-15304140 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 51

Conread position: 195-381
Cow position: chr17:11382505-11382321 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 161, 110

Conread position: 196-381
Cow position: chr17:4107770-4107582 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 18

Conread position: 196-381
Cow position: chr17:4123503-4123318 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 160, 13

Conread position: 197-349
Cow position: chr17:11102791-11102641 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 197-379
Cow position: chr17:45881147-45881333 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 199-380
Cow position: chr17:400317-400135 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 199-380
Cow position: chr17:41919274-41919455 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 160

Conread position: 203-380
Cow position: chr17:39209455-39209273 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 11

Conread position: 204-378
Cow position: chr17:17453350-17453176 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 19

Conread position: 204-380
Cow position: chr17:41113745-41113568 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 153, 63

Conread position: 209-380
Cow position: chr17:25587687-25587513 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 111

Conread position: 211-381
Cow position: chr17:43527248-43527410 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 92, 49

Conread position: 213-381
Cow position: chr17:33272401-33272232 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 60, 32

Conread position: 214-379
Cow position: chr17:932696-932858 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 112, 43

Conread position: 214-380
Cow position: chr17:21066185-21066019 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 43

Conread position: 214-380
Cow position: chr17:45706033-45705869 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 58

Conread position: 216-381
Cow position: chr17:20911895-20912064 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 216-381
Cow position: chr17:34806867-34807028 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 16

Conread position: 219-381
Cow position: chr17:18885059-18884895 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 222-344
Cow position: chr17:7466509-7466388 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 224-349
Cow position: chr17:28084624-28084747 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 225-376
Cow position: chr17:30215184-30215027 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 226-378
Cow position: chr17:11786250-11786402 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 130, 79

Conread position: 229-390
Cow position: chr17:3096488-3096650 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 230-378
Cow position: chr17:6995572-6995721 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 14

Conread position: 230-388
Cow position: chr17:29950831-29950992 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 231-355
Cow position: chr17:29833554-29833430 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 231-380
Cow position: chr17:11795155-11795007 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 84

Conread position: 232-380
Cow position: chr17:41704629-41704481 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 20

Conread position: 232-381
Cow position: chr17:8996100-8995958 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 237-383
Cow position: chr17:1312168-1312315 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 238-380
Cow position: chr17:4304427-4304566 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 29

Conread position: 239-380
Cow position: chr17:23786108-23785969 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 96

Conread position: 245-355
Cow position: chr17:1219347-1219236 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 245-378
Cow position: chr17:40393322-40393456 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 245-381
Cow position: chr17:12290123-12289988 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 107

Conread position: 248-380
Cow position: chr17:28359123-28359256 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 249-381
Cow position: chr17:20233543-20233677 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 253-381
Cow position: chr17:138970-139096 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 254-380
Cow position: chr17:38500902-38500775 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 254-381
Cow position: chr17:2868502-2868375 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 103, 66

Conread position: 255-379
Cow position: chr17:12856603-12856728 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 110
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 258-380
Cow position: chr17:11677880-11677757 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 111
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 258-380
Cow position: chr17:28886318-28886441 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 258-381
Cow position: chr17:40811077-40811197 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 27

Conread position: 258-385
Cow position: chr17:25196974-25196850 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 29

Conread position: 259-380
Cow position: chr17:4152909-4152788 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 26

Conread position: 260-380
Cow position: chr17:36788579-36788458 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 260-383
Cow position: chr17:44233775-44233651 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 262-380
Cow position: chr17:36313348-36313467 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 262-380
Cow position: chr17:36317402-36317521 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 262-380
Cow position: chr17:43826894-43826777 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 42

Conread position: 262-381
Cow position: chr17:17240653-17240536 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 25

Conread position: 266-381
Cow position: chr17:18472544-18472659 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 101
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 70

Conread position: 266-383
Cow position: chr17:22774704-22774822 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 267-380
Cow position: chr17:3155622-3155508 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 267-380
Cow position: chr17:30144502-30144387 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 267-380
Cow position: chr17:33999784-33999670 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 267-381
Cow position: chr17:11033916-11034032 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 267-381
Cow position: chr17:20359949-20360062 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 25

Conread position: 267-381
Cow position: chr17:33289331-33289220 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 268-380
Cow position: chr17:31427098-31427211 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 270-380
Cow position: chr17:3238205-3238316 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 273-380
Cow position: chr17:2584024-2584131 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 56

Conread position: 276-378
Cow position: chr17:36281509-36281613 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 278-380
Cow position: chr17:41759290-41759390 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 287-380
Cow position: chr17:2588425-2588519 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 86
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 287-380
Cow position: chr17:35437429-35437523 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 288-385
Cow position: chr17:13967174-13967076 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 294-380
Cow position: chr17:31099246-31099333 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 81
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.