Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8019O09.5
        

               Conread position:
               50-380
               

               Cow position:
               chr21:30850313-30850644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 0
               

               Conread position:
               53-312
               

               Cow position:
               chr21:23585546-23585805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               53-348
               

               Cow position:
               chr21:25190105-25190404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               53-359
               

               Cow position:
               chr21:2928420-2928114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 205
               

               Conread position:
               53-380
               

               Cow position:
               chr21:2878386-2878060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 253
               

               Conread position:
               53-380
               

               Cow position:
               chr21:4191749-4192076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               106, 19
               

               Conread position:
               53-380
               

               Cow position:
               chr21:10570741-10571052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 204
               

               Conread position:
               53-380
               

               Cow position:
               chr21:10853719-10854038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 0
               

               Conread position:
               53-380
               

               Cow position:
               chr21:13300278-13300591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 42
               

               Conread position:
               53-380
               

               Cow position:
               chr21:27620048-27619738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 52
               

               Conread position:
               53-380
               

               Cow position:
               chr21:30595636-30595309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 224
               

               Conread position:
               53-381
               

               Cow position:
               chr21:1195992-1196320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 136
               

               Conread position:
               53-381
               

               Cow position:
               chr21:3766316-3765985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 96
               

               Conread position:
               53-381
               

               Cow position:
               chr21:4586225-4585894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 201
               

               Conread position:
               53-381
               

               Cow position:
               chr21:5010016-5009686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               53-381
               

               Cow position:
               chr21:5020600-5020921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 132
               

               Conread position:
               53-381
               

               Cow position:
               chr21:16277856-16278180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 129
               

               Conread position:
               53-381
               

               Cow position:
               chr21:21217020-21216684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 40
               

               Conread position:
               53-381
               

               Cow position:
               chr21:27287430-27287757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 150
               

               Conread position:
               53-381
               

               Cow position:
               chr21:27608248-27607910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 0
               

               Conread position:
               53-381
               

               Cow position:
               chr21:31252441-31252781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 56
               

               Conread position:
               53-381
               

               Cow position:
               chr21:31512816-31512489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 43
               

               Conread position:
               53-381
               

               Cow position:
               chr21:33316912-33316583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 0
               

               Conread position:
               53-381
               

               Cow position:
               chr21:49655729-49655402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 221
               

               Conread position:
               57-379
               

               Cow position:
               chr21:13707567-13707252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 96
               

               Conread position:
               57-380
               

               Cow position:
               chr21:19351403-19351079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 0
               

               Conread position:
               57-380
               

               Cow position:
               chr21:36376448-36376762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 76
               

               Conread position:
               57-380
               

               Cow position:
               chr21:36506380-36506057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 52
               

               Conread position:
               60-380
               

               Cow position:
               chr21:44262654-44262963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               264, 97
               

               Conread position:
               61-285
               

               Cow position:
               chr21:24826684-24826449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 206
               

               Conread position:
               61-326
               

               Cow position:
               chr21:29665526-29665266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               62-380
               

               Cow position:
               chr21:9863484-9863161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               76, 305
               

               Conread position:
               64-332
               

               Cow position:
               chr21:13275061-13275323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               58, 105
               

               Conread position:
               64-379
               

               Cow position:
               chr21:19127185-19127497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               64-380
               

               Cow position:
               chr21:9851464-9851781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 30
               

               Conread position:
               65-325
               

               Cow position:
               chr21:27032906-27033164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               65-339
               

               Cow position:
               chr21:42364402-42364674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               65-355
               

               Cow position:
               chr21:12571285-12571571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               165, 7
               

               Conread position:
               65-355
               

               Cow position:
               chr21:22861850-22862144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 201
               

               Conread position:
               65-371
               

               Cow position:
               chr21:4722114-4722419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               232, 42
               

               Conread position:
               65-376
               

               Cow position:
               chr21:17413142-17412841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               65-380
               

               Cow position:
               chr21:3497040-3496724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 0
               

               Conread position:
               65-380
               

               Cow position:
               chr21:9329588-9329277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               65-380
               

               Cow position:
               chr21:21020778-21021102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               126, 55
               

               Conread position:
               65-381
               

               Cow position:
               chr21:13199397-13199701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               291, 74
               

               Conread position:
               65-389
               

               Cow position:
               chr21:21026935-21027246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               66-222
               

               Cow position:
               chr21:18846868-18846713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               66-347
               

               Cow position:
               chr21:44219148-44219425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               66-355
               

               Cow position:
               chr21:45790575-45790865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               87, 8
               

               Conread position:
               66-373
               

               Cow position:
               chr21:5630553-5630254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               66-378
               

               Cow position:
               chr21:33307434-33307748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               71, 6
               

               Conread position:
               66-379
               

               Cow position:
               chr21:20231436-20231136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               66-379
               

               Cow position:
               chr21:24697630-24697935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               66-379
               

               Cow position:
               chr21:25291141-25291453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 104
               

               Conread position:
               66-380
               

               Cow position:
               chr21:5418027-5418336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 54
               

               Conread position:
               66-381
               

               Cow position:
               chr21:18787040-18786731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 6
               

               Conread position:
               66-381
               

               Cow position:
               chr21:28028097-28028415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 132
               

               Conread position:
               66-381
               

               Cow position:
               chr21:28811120-28810801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 146
               

               Conread position:
               66-381
               

               Cow position:
               chr21:29500005-29500317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 173
               

               Conread position:
               66-382
               

               Cow position:
               chr21:17207647-17207947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 6
               

               Conread position:
               66-382
               

               Cow position:
               chr21:26830096-26829775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               66-385
               

               Cow position:
               chr21:42460591-42460287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 20
               

               Conread position:
               67-380
               

               Cow position:
               chr21:44762214-44761902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               68-257
               

               Cow position:
               chr21:33901235-33901046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-345
               

               Cow position:
               chr21:47926859-47927133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               68-351
               

               Cow position:
               chr21:22315998-22316267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               68-353
               

               Cow position:
               chr21:31461851-31462145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               68-355
               

               Cow position:
               chr21:17721049-17721334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               68-379
               

               Cow position:
               chr21:25629198-25629496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               291, 54
               

               Conread position:
               68-380
               

               Cow position:
               chr21:2514320-2514629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 132
               

               Conread position:
               68-380
               

               Cow position:
               chr21:39470295-39469983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 273
               

               Conread position:
               68-381
               

               Cow position:
               chr21:22463664-22463972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 41
               

               Conread position:
               68-381
               

               Cow position:
               chr21:33728576-33728889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 237
               

               Conread position:
               68-389
               

               Cow position:
               chr21:6765553-6765227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 25
               

               Conread position:
               69-277
               

               Cow position:
               chr21:37323333-37323123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               69-294
               

               Cow position:
               chr21:18824210-18824000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               69-294
               

               Cow position:
               chr21:36977467-36977245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               170, 70
               

               Conread position:
               69-355
               

               Cow position:
               chr21:29976435-29976155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               69-379
               

               Cow position:
               chr21:13286632-13286943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               39, 47
               

               Conread position:
               69-379
               

               Cow position:
               chr21:30354327-30354629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               69-380
               

               Cow position:
               chr21:36621008-36620696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               153, 18
               

               Conread position:
               70-217
               

               Cow position:
               chr21:27522357-27522211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               70-377
               

               Cow position:
               chr21:21966645-21966935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               70-377
               

               Cow position:
               chr21:42909318-42909015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               14, 240
               

               Conread position:
               70-380
               

               Cow position:
               chr21:22196940-22196642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               70-380
               

               Cow position:
               chr21:29557252-29556952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               71-379
               

               Cow position:
               chr21:19973898-19974207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 0
               

               Conread position:
               72-188
               

               Cow position:
               chr21:14727158-14727273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               63, 81
               

               Conread position:
               72-192
               

               Cow position:
               chr21:11405407-11405287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-198
               

               Cow position:
               chr21:39428875-39429001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-204
               

               Cow position:
               chr21:1284474-1284342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-218
               

               Cow position:
               chr21:33245793-33245647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-225
               

               Cow position:
               chr21:32573452-32573607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               72-239
               

               Cow position:
               chr21:14534086-14534253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-240
               

               Cow position:
               chr21:25986888-25987055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               72-267
               

               Cow position:
               chr21:28881147-28881336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               72-270
               

               Cow position:
               chr21:34657464-34657661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               72-274
               

               Cow position:
               chr21:27263156-27263356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               72-277
               

               Cow position:
               chr21:8126806-8126605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               72-277
               

               Cow position:
               chr21:23783930-23783726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 13
               

               Conread position:
               72-282
               

               Cow position:
               chr21:4189009-4189225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               72-282
               

               Cow position:
               chr21:23448722-23448927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               72-293
               

               Cow position:
               chr21:34823649-34823870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-301
               

               Cow position:
               chr21:13437573-13437803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               179, 224
               

               Conread position:
               72-313
               

               Cow position:
               chr21:39400709-39400958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               180, 55
               

               Conread position:
               72-316
               

               Cow position:
               chr21:4098047-4098288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               72-317
               

               Cow position:
               chr21:19969706-19969945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               102, 194
               

               Conread position:
               72-320
               

               Cow position:
               chr21:32396553-32396310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               72-326
               

               Cow position:
               chr21:47360698-47360447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 29
               

               Conread position:
               72-326
               

               Cow position:
               chr21:49470106-49470349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               72-332
               

               Cow position:
               chr21:34255106-34254862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               72-333
               

               Cow position:
               chr21:17144161-17144422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-333
               

               Cow position:
               chr21:26400296-26400035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-338
               

               Cow position:
               chr21:37147311-37147039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               62, 207
               

               Conread position:
               72-342
               

               Cow position:
               chr21:26480049-26479786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               72-347
               

               Cow position:
               chr21:40267949-40267693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               72-352
               

               Cow position:
               chr21:21131204-21130916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               177, 238
               

               Conread position:
               72-354
               

               Cow position:
               chr21:21000906-21000637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               10, 77
               

               Conread position:
               72-355
               

               Cow position:
               chr21:31275816-31276093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               72-357
               

               Cow position:
               chr21:4282940-4282651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               72-358
               

               Cow position:
               chr21:20577932-20577644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 118
               

               Conread position:
               72-358
               

               Cow position:
               chr21:32534294-32534571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               72-359
               

               Cow position:
               chr21:4791589-4791874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 76
               

               Conread position:
               72-359
               

               Cow position:
               chr21:10043055-10043341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 131
               

               Conread position:
               72-359
               

               Cow position:
               chr21:13749631-13749920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 78
               

               Conread position:
               72-359
               

               Cow position:
               chr21:23501201-23500914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 28
               

               Conread position:
               72-359
               

               Cow position:
               chr21:23548791-23548503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               72-359
               

               Cow position:
               chr21:30565218-30565495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 247
               

               Conread position:
               72-362
               

               Cow position:
               chr21:6965999-6965709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 257
               

               Conread position:
               72-363
               

               Cow position:
               chr21:47532207-47532493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               72-369
               

               Cow position:
               chr21:17478545-17478836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               46, 41
               

               Conread position:
               72-372
               

               Cow position:
               chr21:38866139-38865838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-374
               

               Cow position:
               chr21:37192059-37191784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               283, 37
               

               Conread position:
               72-376
               

               Cow position:
               chr21:18931648-18931947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               72-378
               

               Cow position:
               chr21:1760981-1760691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               285, 60
               

               Conread position:
               72-378
               

               Cow position:
               chr21:4862002-4861704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               284, 43
               

               Conread position:
               72-378
               

               Cow position:
               chr21:17474191-17474496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               284, 73
               

               Conread position:
               72-378
               

               Cow position:
               chr21:19965080-19965384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 43
               

               Conread position:
               72-378
               

               Cow position:
               chr21:23329870-23329563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-378
               

               Cow position:
               chr21:30313165-30313467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               187, 37
               

               Conread position:
               72-378
               

               Cow position:
               chr21:30627606-30627306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 62
               

               Conread position:
               72-379
               

               Cow position:
               chr21:2293709-2293403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 234
               

               Conread position:
               72-379
               

               Cow position:
               chr21:3479890-3480187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               284, 43
               

               Conread position:
               72-379
               

               Cow position:
               chr21:17415364-17415067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               284, 72
               

               Conread position:
               72-379
               

               Cow position:
               chr21:17435527-17435221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 77
               

               Conread position:
               72-379
               

               Cow position:
               chr21:18837177-18836879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 158
               

               Conread position:
               72-379
               

               Cow position:
               chr21:19967324-19967630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               61, 79
               

               Conread position:
               72-379
               

               Cow position:
               chr21:21918965-21919267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               72-379
               

               Cow position:
               chr21:28915502-28915195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 43
               

               Conread position:
               72-379
               

               Cow position:
               chr21:33832508-33832196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 303
               

               Conread position:
               72-379
               

               Cow position:
               chr21:34592005-34591713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               284, 19
               

               Conread position:
               72-379
               

               Cow position:
               chr21:35576144-35575852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               72-379
               

               Cow position:
               chr21:37923649-37923957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-379
               

               Cow position:
               chr21:38020657-38020960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 67
               

               Conread position:
               72-379
               

               Cow position:
               chr21:38899927-38900226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 15
               

               Conread position:
               72-379
               

               Cow position:
               chr21:39074416-39074117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               65, 77
               

               Conread position:
               72-379
               

               Cow position:
               chr21:44332118-44331834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               284, 33
               

               Conread position:
               72-379
               

               Cow position:
               chr21:46831092-46830784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-379
               

               Cow position:
               chr21:48530637-48530952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:149620-149928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 233
               

               Conread position:
               72-380
               

               Cow position:
               chr21:649206-648895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 81
               

               Conread position:
               72-380
               

               Cow position:
               chr21:1057935-1058253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:4541705-4541405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 29
               

               Conread position:
               72-380
               

               Cow position:
               chr21:4719347-4719038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:4898491-4898191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 158
               

               Conread position:
               72-380
               

               Cow position:
               chr21:5593848-5593540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 199
               

               Conread position:
               72-380
               

               Cow position:
               chr21:5642366-5642055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:6365351-6365653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               176, 37
               

               Conread position:
               72-380
               

               Cow position:
               chr21:7047709-7047403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 233
               

               Conread position:
               72-380
               

               Cow position:
               chr21:9208786-9209089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 15
               

               Conread position:
               72-380
               

               Cow position:
               chr21:10093281-10093586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               72-380
               

               Cow position:
               chr21:13735688-13735380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 76
               

               Conread position:
               72-380
               

               Cow position:
               chr21:16890367-16890062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 180
               

               Conread position:
               72-380
               

               Cow position:
               chr21:18573996-18574296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 158
               

               Conread position:
               72-380
               

               Cow position:
               chr21:19627235-19626928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 127
               

               Conread position:
               72-380
               

               Cow position:
               chr21:20263203-20262884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:20910954-20910649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               72-380
               

               Cow position:
               chr21:21412116-21411822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 76
               

               Conread position:
               72-380
               

               Cow position:
               chr21:23341124-23341433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:24887117-24887423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 163
               

               Conread position:
               72-380
               

               Cow position:
               chr21:25598146-25598446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 107
               

               Conread position:
               72-380
               

               Cow position:
               chr21:25813933-25813645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               72-380
               

               Cow position:
               chr21:26628241-26628549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 194
               

               Conread position:
               72-380
               

               Cow position:
               chr21:26633757-26633448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:26757250-26756941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:26875065-26875373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 15
               

               Conread position:
               72-380
               

               Cow position:
               chr21:27148079-27147770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:29423534-29423840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 153
               

               Conread position:
               72-380
               

               Cow position:
               chr21:30297952-30298261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:30858415-30858735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 283
               

               Conread position:
               72-380
               

               Cow position:
               chr21:30966470-30966161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:31949889-31950195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:32237812-32238121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:32773408-32773717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:33710027-33709718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:33965246-33964950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 51
               

               Conread position:
               72-380
               

               Cow position:
               chr21:34142258-34141961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               99, 90
               

               Conread position:
               72-380
               

               Cow position:
               chr21:34900201-34899892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:36534735-36534432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:36892759-36892450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:39077735-39077437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               72-380
               

               Cow position:
               chr21:39508496-39508188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 67
               

               Conread position:
               72-380
               

               Cow position:
               chr21:41796248-41795943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 14
               

               Conread position:
               72-380
               

               Cow position:
               chr21:42526640-42526969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               11, 263
               

               Conread position:
               72-380
               

               Cow position:
               chr21:42917266-42917575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:44805095-44804800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               188, 37
               

               Conread position:
               72-380
               

               Cow position:
               chr21:44862122-44861810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 81
               

               Conread position:
               72-380
               

               Cow position:
               chr21:45782259-45781954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:46337533-46337832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               284, 45
               

               Conread position:
               72-380
               

               Cow position:
               chr21:47168433-47168743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:47428815-47429124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 207
               

               Conread position:
               72-380
               

               Cow position:
               chr21:47977740-47978049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-380
               

               Cow position:
               chr21:48195924-48196222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 65
               

               Conread position:
               72-380
               

               Cow position:
               chr21:48262289-48262591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 131
               

               Conread position:
               72-380
               

               Cow position:
               chr21:48273724-48273416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 194
               

               Conread position:
               72-380
               

               Cow position:
               chr21:48291882-48291575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 77
               

               Conread position:
               72-381
               

               Cow position:
               chr21:43175-43484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 206
               

               Conread position:
               72-381
               

               Cow position:
               chr21:81219-81527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 34
               

               Conread position:
               72-381
               

               Cow position:
               chr21:470767-471072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 21
               

               Conread position:
               72-381
               

               Cow position:
               chr21:2419670-2419976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 37
               

               Conread position:
               72-381
               

               Cow position:
               chr21:2503215-2503521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 132
               

               Conread position:
               72-381
               

               Cow position:
               chr21:2905319-2905010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 9
               

               Conread position:
               72-381
               

               Cow position:
               chr21:3173115-3173419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               284, 32
               

               Conread position:
               72-381
               

               Cow position:
               chr21:3782246-3782555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 84
               

               Conread position:
               72-381
               

               Cow position:
               chr21:5596263-5596560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               72-381
               

               Cow position:
               chr21:9010634-9010322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               72-381
               

               Cow position:
               chr21:12153297-12153594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 87
               

               Conread position:
               72-381
               

               Cow position:
               chr21:13302676-13302978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 26
               

               Conread position:
               72-381
               

               Cow position:
               chr21:15546215-15545908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 26
               

               Conread position:
               72-381
               

               Cow position:
               chr21:16768650-16768340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-381
               

               Cow position:
               chr21:18851239-18850945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               283, 75
               

               Conread position:
               72-381
               

               Cow position:
               chr21:20244127-20243820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 233
               

               Conread position:
               72-381
               

               Cow position:
               chr21:27342928-27342629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 87
               

               Conread position:
               72-381
               

               Cow position:
               chr21:27375578-27375904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               72-381
               

               Cow position:
               chr21:28476775-28477078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 72
               

               Conread position:
               72-381
               

               Cow position:
               chr21:28908666-28908358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 89
               

               Conread position:
               72-381
               

               Cow position:
               chr21:33257029-33257339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-381
               

               Cow position:
               chr21:36163812-36163506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 98
               

               Conread position:
               72-381
               

               Cow position:
               chr21:37298613-37298924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 128
               

               Conread position:
               72-381
               

               Cow position:
               chr21:39700960-39700652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 194
               

               Conread position:
               72-381
               

               Cow position:
               chr21:42558247-42558557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-381
               

               Cow position:
               chr21:43403965-43403655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-381
               

               Cow position:
               chr21:47648816-47649124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 66
               

               Conread position:
               72-383
               

               Cow position:
               chr21:11144377-11144065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               72-383
               

               Cow position:
               chr21:11509414-11509724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 229
               

               Conread position:
               72-383
               

               Cow position:
               chr21:23801965-23801657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 38
               

               Conread position:
               72-383
               

               Cow position:
               chr21:33948780-33949078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 158
               

               Conread position:
               72-383
               

               Cow position:
               chr21:42858768-42858463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               286, 49
               

               Conread position:
               72-383
               

               Cow position:
               chr21:48234843-48234535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 67
               

               Conread position:
               72-385
               

               Cow position:
               chr21:2768370-2768049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               72-386
               

               Cow position:
               chr21:12802639-12802322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 76
               

               Conread position:
               72-387
               

               Cow position:
               chr21:18979692-18979372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 72
               

               Conread position:
               72-387
               

               Cow position:
               chr21:22855379-22855682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-389
               

               Cow position:
               chr21:37344177-37343874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               65, 81
               

               Conread position:
               72-391
               

               Cow position:
               chr21:28210341-28210652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               73-351
               

               Cow position:
               chr21:40647312-40647589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 180
               

               Conread position:
               73-378
               

               Cow position:
               chr21:29253721-29253437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 168
               

               Conread position:
               73-379
               

               Cow position:
               chr21:45456883-45457176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               284, 42
               

               Conread position:
               73-380
               

               Cow position:
               chr21:32829950-32829654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               125, 80
               

               Conread position:
               73-381
               

               Cow position:
               chr21:4567426-4567725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 114
               

               Conread position:
               74-290
               

               Cow position:
               chr21:49647493-49647284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               74-380
               

               Cow position:
               chr21:7597796-7597489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 0
               

               Conread position:
               74-380
               

               Cow position:
               chr21:31974612-31974924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               74-381
               

               Cow position:
               chr21:20588182-20588484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               74-381
               

               Cow position:
               chr21:33983800-33983490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               75-295
               

               Cow position:
               chr21:9895833-9896054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               75-351
               

               Cow position:
               chr21:45181-45460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 34
               

               Conread position:
               75-357
               

               Cow position:
               chr21:2537681-2537411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               261, 40
               

               Conread position:
               75-381
               

               Cow position:
               chr21:6623287-6623603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 261
               

               Conread position:
               75-387
               

               Cow position:
               chr21:18285282-18285594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 120
               

               Conread position:
               75-388
               

               Cow position:
               chr21:27125242-27124926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 123
               

               Conread position:
               76-283
               

               Cow position:
               chr21:24297596-24297392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               76-306
               

               Cow position:
               chr21:39059852-39059617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               197, 114
               

               Conread position:
               76-309
               

               Cow position:
               chr21:4739111-4739347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               95, 158
               

               Conread position:
               76-379
               

               Cow position:
               chr21:13189582-13189887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               76-379
               

               Cow position:
               chr21:13704534-13704230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               280, 0
               

               Conread position:
               76-379
               

               Cow position:
               chr21:38907670-38907990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               124, 52
               

               Conread position:
               76-379
               

               Cow position:
               chr21:39796960-39797260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               177, 39
               

               Conread position:
               76-380
               

               Cow position:
               chr21:16575970-16575665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 0
               

               Conread position:
               76-380
               

               Cow position:
               chr21:21478556-21478266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               76-380
               

               Cow position:
               chr21:21941087-21940786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               280, 176
               

               Conread position:
               76-380
               

               Cow position:
               chr21:25992179-25991865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               76-380
               

               Cow position:
               chr21:36981483-36981794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               76-380
               

               Cow position:
               chr21:39081883-39081584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               55, 29
               

               Conread position:
               76-380
               

               Cow position:
               chr21:42391040-42390745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               76-381
               

               Cow position:
               chr21:4733061-4732761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               76-381
               

               Cow position:
               chr21:4812867-4812559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 0
               

               Conread position:
               76-381
               

               Cow position:
               chr21:13090313-13090019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 176
               

               Conread position:
               76-381
               

               Cow position:
               chr21:13111645-13111344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 176
               

               Conread position:
               76-381
               

               Cow position:
               chr21:23294008-23293708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               280, 130
               

               Conread position:
               76-381
               

               Cow position:
               chr21:27066122-27065816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 0
               

               Conread position:
               76-381
               

               Cow position:
               chr21:28259140-28259443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 11
               

               Conread position:
               76-381
               

               Cow position:
               chr21:28598063-28598348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               42, 174
               

               Conread position:
               76-382
               

               Cow position:
               chr21:25156761-25157069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 181
               

               Conread position:
               76-388
               

               Cow position:
               chr21:29908599-29908307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               76-388
               

               Cow position:
               chr21:37613144-37613444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 39
               

               Conread position:
               77-226
               

               Cow position:
               chr21:28616731-28616882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               77-377
               

               Cow position:
               chr21:42842811-42842507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               77-378
               

               Cow position:
               chr21:26852399-26852700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               151, 116
               

               Conread position:
               77-380
               

               Cow position:
               chr21:4035802-4035510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 108
               

               Conread position:
               77-380
               

               Cow position:
               chr21:8071622-8071317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 282
               

               Conread position:
               77-380
               

               Cow position:
               chr21:32814659-32814358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 16
               

               Conread position:
               77-380
               

               Cow position:
               chr21:34684522-34684812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               77-381
               

               Cow position:
               chr21:1766048-1765754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 15
               

               Conread position:
               77-381
               

               Cow position:
               chr21:4079500-4079797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 87
               

               Conread position:
               77-381
               

               Cow position:
               chr21:38450516-38450229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 38
               

               Conread position:
               77-381
               

               Cow position:
               chr21:39417554-39417854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               78-207
               

               Cow position:
               chr21:38027098-38027227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               78-377
               

               Cow position:
               chr21:46974254-46973966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 120
               

               Conread position:
               78-378
               

               Cow position:
               chr21:16532601-16532904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               173, 31
               

               Conread position:
               78-380
               

               Cow position:
               chr21:4939648-4939948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               78-381
               

               Cow position:
               chr21:4559595-4559290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               78-387
               

               Cow position:
               chr21:29213342-29213637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 57
               

               Conread position:
               79-279
               

               Cow position:
               chr21:13162898-13163091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               176, 27
               

               Conread position:
               82-376
               

               Cow position:
               chr21:35742983-35742699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               254, 150
               

               Conread position:
               84-326
               

               Cow position:
               chr21:11651093-11650844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               161, 225
               

               Conread position:
               84-380
               

               Cow position:
               chr21:25479756-25480053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 0
               

               Conread position:
               87-352
               

               Cow position:
               chr21:24055359-24055094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               33, 42
               

               Conread position:
               87-378
               

               Cow position:
               chr21:13762718-13763008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               87-378
               

               Cow position:
               chr21:18338096-18337808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               87-380
               

               Cow position:
               chr21:1631446-1631728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               87-380
               

               Cow position:
               chr21:40083028-40083310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               87-381
               

               Cow position:
               chr21:26240754-26241022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               91-382
               

               Cow position:
               chr21:744202-743922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 13
               

               Conread position:
               92-380
               

               Cow position:
               chr21:15444554-15444267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               93-379
               

               Cow position:
               chr21:15585224-15584946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 46
               

               Conread position:
               96-336
               

               Cow position:
               chr21:40618446-40618207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               237, 0
               

               Conread position:
               96-352
               

               Cow position:
               chr21:48034832-48034586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               239, 92
               

               Conread position:
               96-378
               

               Cow position:
               chr21:44092994-44092724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               98-379
               

               Cow position:
               chr21:3253133-3253414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 113
               

               Conread position:
               98-380
               

               Cow position:
               chr21:39486774-39486492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 94
               

               Conread position:
               99-319
               

               Cow position:
               chr21:28441943-28442171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               160, 49
               

               Conread position:
               101-381
               

               Cow position:
               chr21:4278810-4279090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 47
               

               Conread position:
               102-380
               

               Cow position:
               chr21:451380-451662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 150
               

               Conread position:
               102-381
               

               Cow position:
               chr21:22719592-22719319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 7
               

               Conread position:
               105-379
               

               Cow position:
               chr21:31499509-31499780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               191, 201
               

               Conread position:
               106-380
               

               Cow position:
               chr21:34181172-34181447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 0
               

               Conread position:
               107-383
               

               Cow position:
               chr21:33934407-33934129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               109-264
               

               Cow position:
               chr21:40478906-40478751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               109-305
               

               Cow position:
               chr21:10239878-10239690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               109-374
               

               Cow position:
               chr21:31642697-31642957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               251, 35
               

               Conread position:
               109-379
               

               Cow position:
               chr21:35389658-35389365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               109-379
               

               Cow position:
               chr21:39764034-39764302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               109-380
               

               Cow position:
               chr21:8419626-8419902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               131, 100
               

               Conread position:
               109-381
               

               Cow position:
               chr21:8890391-8890679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               113-379
               

               Cow position:
               chr21:28872325-28872580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               115-380
               

               Cow position:
               chr21:28988799-28989065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 0
               

               Conread position:
               115-381
               

               Cow position:
               chr21:33619973-33620231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               109, 24
               

               Conread position:
               115-381
               

               Cow position:
               chr21:48108667-48108391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               115-383
               

               Cow position:
               chr21:78524-78256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               80, 142
               

               Conread position:
               116-380
               

               Cow position:
               chr21:7038676-7038411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 0
               

               Conread position:
               116-380
               

               Cow position:
               chr21:9201371-9201639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 110
               

               Conread position:
               117-380
               

               Cow position:
               chr21:12076212-12075950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 121
               

               Conread position:
               117-380
               

               Cow position:
               chr21:26855175-26854911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 0
               

               Conread position:
               119-381
               

               Cow position:
               chr21:5594856-5595119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 0
               

               Conread position:
               120-381
               

               Cow position:
               chr21:21032770-21033046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               102, 12
               

               Conread position:
               122-346
               

               Cow position:
               chr21:29652300-29652521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               122-380
               

               Cow position:
               chr21:1685710-1685453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               168, 65
               

               Conread position:
               123-380
               

               Cow position:
               chr21:2289573-2289827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               234, 142
               

               Conread position:
               124-381
               

               Cow position:
               chr21:13314992-13315244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               232, 83
               

               Conread position:
               125-338
               

               Cow position:
               chr21:451162-451378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               191, 127
               

               Conread position:
               125-359
               

               Cow position:
               chr21:48486244-48486012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               139, 69
               

               Conread position:
               125-376
               

               Cow position:
               chr21:33349900-33350151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 36
               

               Conread position:
               126-381
               

               Cow position:
               chr21:3586379-3586117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               129-277
               

               Cow position:
               chr21:33414302-33414156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 137
               

               Conread position:
               131-388
               

               Cow position:
               chr21:22123272-22123023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               135-381
               

               Cow position:
               chr21:27864319-27864073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               128, 13
               

               Conread position:
               137-363
               

               Cow position:
               chr21:940483-940250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               139-342
               

               Cow position:
               chr21:10668786-10668584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               131, 113
               

               Conread position:
               139-377
               

               Cow position:
               chr21:18934151-18934384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               140-379
               

               Cow position:
               chr21:24606624-24606858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 93
               

               Conread position:
               140-380
               

               Cow position:
               chr21:6619821-6619590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               216, 85
               

               Conread position:
               140-380
               

               Cow position:
               chr21:25603969-25603732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               217, 20
               

               Conread position:
               141-380
               

               Cow position:
               chr21:21267697-21267459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               119, 61
               

               Conread position:
               143-380
               

               Cow position:
               chr21:8274960-8274726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               145-379
               

               Cow position:
               chr21:12100228-12100451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               211, 7
               

               Conread position:
               148-303
               

               Cow position:
               chr21:13678172-13678024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               100, 112
               

               Conread position:
               148-355
               

               Cow position:
               chr21:2460385-2460590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               148-374
               

               Cow position:
               chr21:46241972-46241750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               206, 97
               

               Conread position:
               148-378
               

               Cow position:
               chr21:28625269-28625489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               148-378
               

               Cow position:
               chr21:40454628-40454394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               45, 190
               

               Conread position:
               148-378
               

               Cow position:
               chr21:46599300-46599080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               173, 94
               

               Conread position:
               148-379
               

               Cow position:
               chr21:29015917-29015689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 104
               

               Conread position:
               148-380
               

               Cow position:
               chr21:17371009-17370778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 73
               

               Conread position:
               148-381
               

               Cow position:
               chr21:1463455-1463695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               148-381
               

               Cow position:
               chr21:4137613-4137384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 195
               

               Conread position:
               152-376
               

               Cow position:
               chr21:4595412-4595192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               204, 101
               

               Conread position:
               152-379
               

               Cow position:
               chr21:22456426-22456654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               156-381
               

               Cow position:
               chr21:37874110-37873890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               200, 96
               

               Conread position:
               157-380
               

               Cow position:
               chr21:11663686-11663462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               158-359
               

               Cow position:
               chr21:9567024-9567216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               198, 147
               

               Conread position:
               158-381
               

               Cow position:
               chr21:42443375-42443154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 99
               

               Conread position:
               159-381
               

               Cow position:
               chr21:37518135-37517912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               160-354
               

               Cow position:
               chr21:7198656-7198453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               47, 164
               

               Conread position:
               160-380
               

               Cow position:
               chr21:12810332-12810118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               198, 84
               

               Conread position:
               161-380
               

               Cow position:
               chr21:13276314-13276538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               85, 141
               

               Conread position:
               161-380
               

               Cow position:
               chr21:28839532-28839753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               163-380
               

               Cow position:
               chr21:18053092-18052869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               39, 148
               

               Conread position:
               164-381
               

               Cow position:
               chr21:21103283-21103501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               164-387
               

               Cow position:
               chr21:5088475-5088692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 45
               

               Conread position:
               164-394
               

               Cow position:
               chr21:29214919-29214688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 87
               

               Conread position:
               165-380
               

               Cow position:
               chr21:30655207-30655421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 12
               

               Conread position:
               165-380
               

               Cow position:
               chr21:33947835-33947623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               136, 9
               

               Conread position:
               165-390
               

               Cow position:
               chr21:1629102-1629329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               189, 102
               

               Conread position:
               166-380
               

               Cow position:
               chr21:34734406-34734621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               166-381
               

               Cow position:
               chr21:30159500-30159286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               190, 78
               

               Conread position:
               167-374
               

               Cow position:
               chr21:20533891-20533690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               167, 35
               

               Conread position:
               168-380
               

               Cow position:
               chr21:28056846-28057064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               74, 53
               

               Conread position:
               168-380
               

               Cow position:
               chr21:28730178-28730395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               74, 53
               

               Conread position:
               168-380
               

               Cow position:
               chr21:30894254-30894467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               79, 141
               

               Conread position:
               168-381
               

               Cow position:
               chr21:42543147-42542929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               169-380
               

               Cow position:
               chr21:31040265-31040053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               170-375
               

               Cow position:
               chr21:33139009-33139215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               170-380
               

               Cow position:
               chr21:33997984-33997770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               172, 27
               

               Conread position:
               170-382
               

               Cow position:
               chr21:1059835-1060045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               186, 135
               

               Conread position:
               172-376
               

               Cow position:
               chr21:28616861-28617057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               164, 5
               

               Conread position:
               178-378
               

               Cow position:
               chr21:14984169-14983971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               177, 54
               

               Conread position:
               180-355
               

               Cow position:
               chr21:3629215-3629041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               180-376
               

               Cow position:
               chr21:17482020-17482214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               177, 72
               

               Conread position:
               180-380
               

               Cow position:
               chr21:47029589-47029388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               180-391
               

               Cow position:
               chr21:26744704-26744494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               176, 64
               

               Conread position:
               182-379
               

               Cow position:
               chr21:16270424-16270233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               174, 63
               

               Conread position:
               183-381
               

               Cow position:
               chr21:9511893-9511698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 110
               

               Conread position:
               188-380
               

               Cow position:
               chr21:3923500-3923693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               188-380
               

               Cow position:
               chr21:11292295-11292488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               189-381
               

               Cow position:
               chr21:28428638-28428831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               190-380
               

               Cow position:
               chr21:39429211-39429402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               191-380
               

               Cow position:
               chr21:12076871-12077061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               72, 61
               

               Conread position:
               191-381
               

               Cow position:
               chr21:30250940-30250750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 89
               

               Conread position:
               192-381
               

               Cow position:
               chr21:36701689-36701500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               193-380
               

               Cow position:
               chr21:7524711-7524899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               194-380
               

               Cow position:
               chr21:9711444-9711266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               162, 60
               

               Conread position:
               196-380
               

               Cow position:
               chr21:45446267-45446445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               118, 49
               

               Conread position:
               196-381
               

               Cow position:
               chr21:47342487-47342688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 30
               

               Conread position:
               197-378
               

               Cow position:
               chr21:2366623-2366798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               159, 53
               

               Conread position:
               198-378
               

               Cow position:
               chr21:25472773-25472952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               158, 69
               

               Conread position:
               201-381
               

               Cow position:
               chr21:14727335-14727526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               203-371
               

               Cow position:
               chr21:10436458-10436623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               153, 53
               

               Conread position:
               203-378
               

               Cow position:
               chr21:23290986-23290810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               205-380
               

               Cow position:
               chr21:20490860-20490679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 123
               

               Conread position:
               206-380
               

               Cow position:
               chr21:7666786-7666604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               209-380
               

               Cow position:
               chr21:29942283-29942450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               147, 45
               

               Conread position:
               209-381
               

               Cow position:
               chr21:28734919-28734746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               214-359
               

               Cow position:
               chr21:4999413-4999270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               142, 46
               

               Conread position:
               214-378
               

               Cow position:
               chr21:45904337-45904175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               127, 52
               

               Conread position:
               214-380
               

               Cow position:
               chr21:5634305-5634470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               142, 58
               

               Conread position:
               214-380
               

               Cow position:
               chr21:19051201-19051033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               214-380
               

               Cow position:
               chr21:19613858-19614026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               214-381
               

               Cow position:
               chr21:27146919-27146752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               143, 127
               

               Conread position:
               217-379
               

               Cow position:
               chr21:22092926-22093089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               218-346
               

               Cow position:
               chr21:22052955-22053084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               218-374
               

               Cow position:
               chr21:35643827-35643676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               138, 35
               

               Conread position:
               218-380
               

               Cow position:
               chr21:13388442-13388603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               138, 23
               

               Conread position:
               219-378
               

               Cow position:
               chr21:20107459-20107298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               220-359
               

               Cow position:
               chr21:2525868-2525728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               221-383
               

               Cow position:
               chr21:29633803-29633963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               223-380
               

               Cow position:
               chr21:25738576-25738418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               136
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               225-381
               

               Cow position:
               chr21:5899111-5898956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               131, 57
               

               Conread position:
               226-378
               

               Cow position:
               chr21:9968694-9968541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               226-380
               

               Cow position:
               chr21:4863184-4863032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               128, 26
               

               Conread position:
               227-347
               

               Cow position:
               chr21:41889417-41889297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               227-380
               

               Cow position:
               chr21:6698068-6697914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               227-380
               

               Cow position:
               chr21:11760337-11760189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               129, 84
               

               Conread position:
               227-381
               

               Cow position:
               chr21:9011864-9011712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               129, 78
               

               Conread position:
               228-383
               

               Cow position:
               chr21:18288958-18289119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               229-380
               

               Cow position:
               chr21:24947800-24947653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               230-379
               

               Cow position:
               chr21:29854979-29855125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               230-381
               

               Cow position:
               chr21:22856482-22856632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 128
               

               Conread position:
               230-383
               

               Cow position:
               chr21:7793885-7793736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               232-380
               

               Cow position:
               chr21:47776-47925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               232-380
               

               Cow position:
               chr21:36854546-36854695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               234-380
               

               Cow position:
               chr21:36956263-36956413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               239-378
               

               Cow position:
               chr21:13716621-13716482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               239-380
               

               Cow position:
               chr21:28026448-28026587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 15
               

               Conread position:
               239-380
               

               Cow position:
               chr21:30296262-30296400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               241-381
               

               Cow position:
               chr21:25344193-25344335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               244-380
               

               Cow position:
               chr21:30571435-30571298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               244-381
               

               Cow position:
               chr21:34301225-34301363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               245-381
               

               Cow position:
               chr21:23605989-23606125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               111, 14
               

               Conread position:
               246-378
               

               Cow position:
               chr21:34395199-34395065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               246-381
               

               Cow position:
               chr21:5237727-5237861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               110, 11
               

               Conread position:
               246-381
               

               Cow position:
               chr21:14759775-14759912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               247-380
               

               Cow position:
               chr21:33770325-33770459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               247-380
               

               Cow position:
               chr21:40478909-40479043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               249-380
               

               Cow position:
               chr21:170505-170638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 71
               

               Conread position:
               251-381
               

               Cow position:
               chr21:28881438-28881566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               253-380
               

               Cow position:
               chr21:12325352-12325477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               103, 53
               

               Conread position:
               254-379
               

               Cow position:
               chr21:11467193-11467319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               258-380
               

               Cow position:
               chr21:15274966-15275086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               258-380
               

               Cow position:
               chr21:45842344-45842221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               258-381
               

               Cow position:
               chr21:29484296-29484418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               260-379
               

               Cow position:
               chr21:34074298-34074418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               267-377
               

               Cow position:
               chr21:12440294-12440403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               267-379
               

               Cow position:
               chr21:16167502-16167388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-379
               

               Cow position:
               chr21:31575856-31575969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               267-380
               

               Cow position:
               chr21:1752057-1752171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               267-380
               

               Cow position:
               chr21:11083285-11083172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               95, 77
               

               Conread position:
               267-380
               

               Cow position:
               chr21:34894495-34894609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 99
               

               Conread position:
               267-381
               

               Cow position:
               chr21:31640-31755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               267-391
               

               Cow position:
               chr21:33243074-33243198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               272-380
               

               Cow position:
               chr21:22724686-22724578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 38
               

               Conread position:
               273-380
               

               Cow position:
               chr21:10075590-10075482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               275-381
               

               Cow position:
               chr21:27522020-27521913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               278-381
               

               Cow position:
               chr21:36780804-36780908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               288-380
               

               Cow position:
               chr21:33107805-33107712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               68, 0
               
Show alignments to all cow chromosomes.
Conread position:	50-380
Cow position:	chr21:30850313-30850644 (view UCSC Genome Browser custom track)
Alignm length:	332
Alignm identity:	266
Alignm E-value:	0
Alignm gaps (pig, cow):	306, 0
Conread position:	53-312
Cow position:	chr21:23585546-23585805 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	197
Alignm E-value:	0
Alignm gaps (pig, cow):	0, 0
Conread position:	53-348
Cow position:	chr21:25190105-25190404 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	223
Alignm E-value:	0
Alignm gaps (pig, cow):	119, 0
Conread position:	53-359
Cow position:	chr21:2928420-2928114 (view UCSC Genome Browser custom track)
Alignm length:	309
Alignm identity:	225
Alignm E-value:	0
Alignm gaps (pig, cow):	83, 205
Conread position:	53-380
Cow position:	chr21:2878386-2878060 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	260
Alignm E-value:	0
Alignm gaps (pig, cow):	179, 253
Conread position:	53-381
Cow position:	chr21:1195992-1196320 (view UCSC Genome Browser custom track)
Alignm length:	331
Alignm identity:	260
Alignm E-value:	0
Alignm gaps (pig, cow):	148, 136
Conread position:	57-379
Cow position:	chr21:13707567-13707252 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	216
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	79, 96
Conread position:	57-380
Cow position:	chr21:19351403-19351079 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	255
Alignm E-value:	0
Alignm gaps (pig, cow):	299, 0
Conread position:	60-380
Cow position:	chr21:44262654-44262963 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	219
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	264, 97
Conread position:	61-285
Cow position:	chr21:24826684-24826449 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	178
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	12, 206
Conread position:	61-326
Cow position:	chr21:29665526-29665266 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	192
Alignm E-value:	7e-29
Alignm gaps (pig, cow):	10, 68
Conread position:	62-380
Cow position:	chr21:9863484-9863161 (view UCSC Genome Browser custom track)
Alignm length:	327
Alignm identity:	229
Alignm E-value:	4.2039e-45
Alignm gaps (pig, cow):	76, 305
Conread position:	64-332
Cow position:	chr21:13275061-13275323 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	181
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	58, 105
Conread position:	64-379
Cow position:	chr21:19127185-19127497 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	209
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	57, 22
Conread position:	64-380
Cow position:	chr21:9851464-9851781 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	230
Alignm E-value:	0
Alignm gaps (pig, cow):	123, 30
Conread position:	65-325
Cow position:	chr21:27032906-27033164 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	177
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	10, 0
Conread position:	65-339
Cow position:	chr21:42364402-42364674 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	212
Alignm E-value:	0
Alignm gaps (pig, cow):	70, 62
Conread position:	65-355
Cow position:	chr21:12571285-12571571 (view UCSC Genome Browser custom track)
Alignm length:	296
Alignm identity:	203
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	165, 7
Conread position:	65-371
Cow position:	chr21:4722114-4722419 (view UCSC Genome Browser custom track)
Alignm length:	317
Alignm identity:	219
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	232, 42
Conread position:	65-376
Cow position:	chr21:17413142-17412841 (view UCSC Genome Browser custom track)
Alignm length:	317
Alignm identity:	217
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	75, 10