Cow genome map

Conread name: Ss1.1-Pig3-SRG8019O09.5

Conread position: 53-175
Cow position: chrX:5375190-5375068 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 53-197
Cow position: chrX:27497916-27498060 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 53-221
Cow position: chrX:9095730-9095897 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 53-225
Cow position: chrX:15122074-15121902 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 53-239
Cow position: chrX:23221955-23221772 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 53-335
Cow position: chrX:29099504-29099785 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 53-352
Cow position: chrX:29892174-29892472 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 53-355
Cow position: chrX:29880193-29879891 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 53-378
Cow position: chrX:36691920-36692247 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 76

Conread position: 53-379
Cow position: chrX:12178761-12179093 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 53-379
Cow position: chrX:16711043-16711369 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 314

Conread position: 53-379
Cow position: chrX:23280111-23280423 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 161

Conread position: 53-379
Cow position: chrX:23572730-23572402 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 53-380
Cow position: chrX:18193777-18194105 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-380
Cow position: chrX:21582530-21582857 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 248

Conread position: 53-380
Cow position: chrX:22493118-22493422 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 303, 155

Conread position: 53-380
Cow position: chrX:37363798-37364137 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 199

Conread position: 53-381
Cow position: chrX:323001-323331 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 53-381
Cow position: chrX:865483-865812 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-381
Cow position: chrX:1550052-1550381 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-381
Cow position: chrX:3406256-3405937 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 194

Conread position: 53-381
Cow position: chrX:4905900-4905574 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 103

Conread position: 53-381
Cow position: chrX:5354215-5353887 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 62

Conread position: 53-381
Cow position: chrX:7572478-7572797 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 120

Conread position: 53-381
Cow position: chrX:12310302-12309970 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 321

Conread position: 53-381
Cow position: chrX:16782367-16782696 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-381
Cow position: chrX:17663829-17663503 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 143

Conread position: 53-381
Cow position: chrX:18950649-18950320 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 0

Conread position: 53-381
Cow position: chrX:21254866-21255191 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 199

Conread position: 53-381
Cow position: chrX:22869906-22870235 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 305

Conread position: 53-381
Cow position: chrX:23038897-23038581 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 56

Conread position: 53-381
Cow position: chrX:23387451-23387122 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-381
Cow position: chrX:23395694-23396023 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-381
Cow position: chrX:26531060-26531375 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 0

Conread position: 53-381
Cow position: chrX:26755554-26755213 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 56

Conread position: 53-381
Cow position: chrX:27615899-27616219 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 132

Conread position: 53-381
Cow position: chrX:30059974-30060304 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 207

Conread position: 53-381
Cow position: chrX:31728555-31728879 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 86

Conread position: 53-381
Cow position: chrX:32145168-32144852 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 87

Conread position: 53-381
Cow position: chrX:35239959-35240282 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 147

Conread position: 53-381
Cow position: chrX:41156398-41156727 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-383
Cow position: chrX:7551714-7551385 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 276

Conread position: 53-383
Cow position: chrX:16702758-16703089 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 53-385
Cow position: chrX:23341904-23341572 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 199

Conread position: 53-388
Cow position: chrX:24588647-24588313 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 87

Conread position: 54-380
Cow position: chrX:39701941-39702266 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 56-378
Cow position: chrX:18247448-18247762 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 6

Conread position: 56-379
Cow position: chrX:14268111-14267791 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 181

Conread position: 57-380
Cow position: chrX:22077251-22076927 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 0

Conread position: 57-380
Cow position: chrX:29849532-29849214 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 52

Conread position: 58-355
Cow position: chrX:8107860-8108151 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 154

Conread position: 58-380
Cow position: chrX:6659623-6659944 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 39

Conread position: 60-355
Cow position: chrX:18288759-18288472 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 11, 78

Conread position: 61-373
Cow position: chrX:21729060-21728767 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 61-381
Cow position: chrX:34442347-34442026 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 63-381
Cow position: chrX:39556699-39556379 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 64-342
Cow position: chrX:44491333-44491058 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 0

Conread position: 64-349
Cow position: chrX:3246060-3245784 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 64-380
Cow position: chrX:4498735-4499046 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 166, 12

Conread position: 64-381
Cow position: chrX:17098184-17097867 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 203
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 8

Conread position: 65-313
Cow position: chrX:39903395-39903158 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 156, 74

Conread position: 65-315
Cow position: chrX:37453308-37453557 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 178, 17

Conread position: 65-374
Cow position: chrX:38569580-38569888 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 181

Conread position: 65-378
Cow position: chrX:24889031-24888726 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 45

Conread position: 65-379
Cow position: chrX:23314708-23314399 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 41

Conread position: 65-380
Cow position: chrX:13912192-13912511 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 135

Conread position: 65-380
Cow position: chrX:30455523-30455207 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 170

Conread position: 65-380
Cow position: chrX:44018802-44019115 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 65-381
Cow position: chrX:21832983-21833285 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 106

Conread position: 65-381
Cow position: chrX:27977735-27977415 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 0

Conread position: 65-387
Cow position: chrX:35028350-35028666 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 7

Conread position: 66-272
Cow position: chrX:33537682-33537882 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 185, 6

Conread position: 66-309
Cow position: chrX:38218078-38218327 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 10

Conread position: 66-313
Cow position: chrX:5361110-5361357 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 66-354
Cow position: chrX:8482546-8482827 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 165

Conread position: 66-355
Cow position: chrX:41305126-41304842 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 10

Conread position: 66-359
Cow position: chrX:29916244-29915952 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 9

Conread position: 66-359
Cow position: chrX:35024167-35024449 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 8

Conread position: 66-376
Cow position: chrX:27423180-27422873 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 7

Conread position: 66-380
Cow position: chrX:2813380-2813067 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 9

Conread position: 66-380
Cow position: chrX:11976345-11976031 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 9

Conread position: 66-380
Cow position: chrX:17985508-17985200 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 53

Conread position: 66-380
Cow position: chrX:22564581-22564272 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 6

Conread position: 66-380
Cow position: chrX:25405273-25404951 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 97

Conread position: 66-380
Cow position: chrX:29875893-29875586 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 6

Conread position: 66-380
Cow position: chrX:30159889-30159580 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 6

Conread position: 66-381
Cow position: chrX:4751266-4750956 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 74

Conread position: 66-381
Cow position: chrX:5248487-5248801 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 119

Conread position: 66-381
Cow position: chrX:6279501-6279190 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 6

Conread position: 66-381
Cow position: chrX:11950384-11950073 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 6

Conread position: 66-381
Cow position: chrX:21063575-21063887 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 6

Conread position: 66-381
Cow position: chrX:23452343-23452029 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 6

Conread position: 66-381
Cow position: chrX:30136766-30136450 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 179, 58

Conread position: 66-381
Cow position: chrX:41791614-41791296 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 6

Conread position: 66-381
Cow position: chrX:44193340-44193024 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 0

Conread position: 67-246
Cow position: chrX:3155482-3155305 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 76

Conread position: 67-352
Cow position: chrX:1789342-1789620 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 229, 19

Conread position: 67-380
Cow position: chrX:15091663-15091354 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 133

Conread position: 67-381
Cow position: chrX:6766634-6766329 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 185

Conread position: 68-275
Cow position: chrX:22308469-22308268 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 68-312
Cow position: chrX:15039967-15039732 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 7

Conread position: 68-334
Cow position: chrX:31379061-31379323 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 103, 14

Conread position: 68-355
Cow position: chrX:13266559-13266861 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 130, 25

Conread position: 68-357
Cow position: chrX:11991046-11990760 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 68-359
Cow position: chrX:21494516-21494809 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 174, 7

Conread position: 68-374
Cow position: chrX:17902389-17902087 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 158, 41

Conread position: 68-377
Cow position: chrX:37118011-37118309 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 177

Conread position: 68-378
Cow position: chrX:4408659-4408974 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 55, 81

Conread position: 68-379
Cow position: chrX:19595030-19595339 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 199

Conread position: 68-379
Cow position: chrX:24170217-24169891 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 96

Conread position: 68-379
Cow position: chrX:30354496-30354806 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 177, 72

Conread position: 68-380
Cow position: chrX:13430688-13430380 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 208

Conread position: 68-380
Cow position: chrX:14050092-14049779 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 0

Conread position: 68-380
Cow position: chrX:16021275-16020967 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 68-380
Cow position: chrX:24413133-24413445 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 41

Conread position: 68-380
Cow position: chrX:37832363-37832058 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 32

Conread position: 68-380
Cow position: chrX:40693627-40693306 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 77

Conread position: 68-381
Cow position: chrX:23317309-23317005 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 54

Conread position: 68-381
Cow position: chrX:34221869-34222166 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 7

Conread position: 68-385
Cow position: chrX:24205133-24205441 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 201
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 289, 56

Conread position: 69-380
Cow position: chrX:12102858-12102550 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 7

Conread position: 69-380
Cow position: chrX:23928073-23927770 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 16, 119

Conread position: 69-380
Cow position: chrX:34034441-34034741 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 204, 58

Conread position: 69-381
Cow position: chrX:26508331-26508638 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 35

Conread position: 69-381
Cow position: chrX:30165558-30165257 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 7

Conread position: 70-379
Cow position: chrX:2248241-2247943 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 199, 17

Conread position: 70-380
Cow position: chrX:303610-303906 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 205
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 286, 52

Conread position: 70-380
Cow position: chrX:31495841-31496151 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 28

Conread position: 70-380
Cow position: chrX:39548503-39548814 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 0

Conread position: 70-380
Cow position: chrX:39560555-39560237 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 70-381
Cow position: chrX:26442147-26441844 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 63

Conread position: 70-386
Cow position: chrX:388629-388927 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 286, 50

Conread position: 72-183
Cow position: chrX:3827773-3827884 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 72-183
Cow position: chrX:20580399-20580509 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 72-185
Cow position: chrX:11819566-11819453 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 72-185
Cow position: chrX:42466888-42466775 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 77

Conread position: 72-190
Cow position: chrX:9763965-9763847 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 72-196
Cow position: chrX:7120713-7120837 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 72-198
Cow position: chrX:5427366-5427492 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 72-216
Cow position: chrX:40184179-40184323 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 72-223
Cow position: chrX:27750354-27750504 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 72-227
Cow position: chrX:6201636-6201788 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 63

Conread position: 72-228
Cow position: chrX:26618230-26618386 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 72-233
Cow position: chrX:34094812-34094973 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 72-234
Cow position: chrX:15175445-15175284 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 72-240
Cow position: chrX:20792248-20792410 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 72-240
Cow position: chrX:24346155-24346323 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 72-240
Cow position: chrX:33763251-33763419 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 72-242
Cow position: chrX:20733681-20733850 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 37

Conread position: 72-249
Cow position: chrX:17889754-17889578 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 162, 0

Conread position: 72-250
Cow position: chrX:4767802-4767974 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 37

Conread position: 72-250
Cow position: chrX:20790434-20790256 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 172, 165

Conread position: 72-250
Cow position: chrX:24316928-24317106 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 11, 83

Conread position: 72-253
Cow position: chrX:27070952-27071131 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 72-256
Cow position: chrX:20674974-20675157 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 172, 0

Conread position: 72-256
Cow position: chrX:22118388-22118206 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 142, 0

Conread position: 72-257
Cow position: chrX:28058428-28058611 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 164, 0

Conread position: 72-257
Cow position: chrX:45374002-45373817 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 72-264
Cow position: chrX:7484913-7485105 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 72-271
Cow position: chrX:22838378-22838577 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 72-274
Cow position: chrX:30964880-30964678 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 72-276
Cow position: chrX:17290286-17290490 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 72-278
Cow position: chrX:8400445-8400252 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 72-280
Cow position: chrX:21626593-21626380 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 133, 13

Conread position: 72-281
Cow position: chrX:41885072-41884875 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 178, 105

Conread position: 72-282
Cow position: chrX:3144735-3144945 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 142

Conread position: 72-282
Cow position: chrX:16085552-16085342 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 72-288
Cow position: chrX:8144772-8144563 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 72-289
Cow position: chrX:18023886-18023668 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 72-290
Cow position: chrX:1617128-1616908 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 174, 0

Conread position: 72-295
Cow position: chrX:35287532-35287758 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 182, 90

Conread position: 72-297
Cow position: chrX:150578-150801 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 172, 57

Conread position: 72-300
Cow position: chrX:28647163-28646945 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 72-309
Cow position: chrX:34564201-34564420 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 72-317
Cow position: chrX:25573458-25573695 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 113, 0

Conread position: 72-321
Cow position: chrX:26230652-26230403 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 72-324
Cow position: chrX:620158-619901 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 84

Conread position: 72-327
Cow position: chrX:20356889-20356634 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 72-338
Cow position: chrX:42954546-42954810 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 89

Conread position: 72-341
Cow position: chrX:33685237-33685506 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 72-344
Cow position: chrX:32064062-32063793 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 169
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 95, 131

Conread position: 72-345
Cow position: chrX:28557472-28557731 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 41

Conread position: 72-353
Cow position: chrX:11499670-11499396 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 0

Conread position: 72-355
Cow position: chrX:16325420-16325140 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 72-355
Cow position: chrX:33583800-33584077 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 81

Conread position: 72-359
Cow position: chrX:21389684-21389972 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-359
Cow position: chrX:21793696-21793985 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 72-362
Cow position: chrX:12346002-12346293 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-363
Cow position: chrX:2524626-2524325 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 35

Conread position: 72-363
Cow position: chrX:8590687-8590979 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 181

Conread position: 72-363
Cow position: chrX:28866906-28866620 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 30

Conread position: 72-364
Cow position: chrX:21414973-21415266 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-367
Cow position: chrX:22538927-22538631 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-376
Cow position: chrX:29700837-29700543 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 105

Conread position: 72-377
Cow position: chrX:30681398-30681092 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 215

Conread position: 72-377
Cow position: chrX:31933793-31933489 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 263, 150

Conread position: 72-377
Cow position: chrX:32584825-32584519 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-378
Cow position: chrX:677993-677683 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 151, 81

Conread position: 72-378
Cow position: chrX:11461889-11461585 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 15

Conread position: 72-378
Cow position: chrX:16359901-16359596 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 194

Conread position: 72-378
Cow position: chrX:24468017-24467712 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 40

Conread position: 72-378
Cow position: chrX:25847907-25848214 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 143

Conread position: 72-378
Cow position: chrX:28523555-28523253 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 168, 13

Conread position: 72-378
Cow position: chrX:30086196-30085895 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 68

Conread position: 72-378
Cow position: chrX:35937969-35937672 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 15

Conread position: 72-378
Cow position: chrX:42222667-42222374 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 168

Conread position: 72-379
Cow position: chrX:1947837-1947545 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 26

Conread position: 72-379
Cow position: chrX:2323813-2324121 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-379
Cow position: chrX:4995716-4996029 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 72-379
Cow position: chrX:10412869-10412559 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 152

Conread position: 72-379
Cow position: chrX:12145205-12145516 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 72-379
Cow position: chrX:16035402-16035099 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 33

Conread position: 72-379
Cow position: chrX:17994565-17994873 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-379
Cow position: chrX:22810996-22811303 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 263

Conread position: 72-379
Cow position: chrX:24109498-24109193 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 152

Conread position: 72-379
Cow position: chrX:28503442-28503750 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-379
Cow position: chrX:28624654-28624347 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 43

Conread position: 72-379
Cow position: chrX:29759794-29760101 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 180

Conread position: 72-379
Cow position: chrX:29876952-29876643 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 85

Conread position: 72-379
Cow position: chrX:40365639-40365329 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 72-379
Cow position: chrX:41734079-41733777 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 33

Conread position: 72-379
Cow position: chrX:42380735-42380428 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 41

Conread position: 72-380
Cow position: chrX:671887-671588 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 179

Conread position: 72-380
Cow position: chrX:2048218-2048527 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:2103511-2103820 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:2159871-2160180 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:2293494-2293185 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:2382573-2382882 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 81

Conread position: 72-380
Cow position: chrX:2486526-2486215 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 72-380
Cow position: chrX:2500524-2500216 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 102

Conread position: 72-380
Cow position: chrX:2559854-2559545 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:2579525-2579834 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:2649243-2648946 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 99

Conread position: 72-380
Cow position: chrX:3082024-3081716 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 37

Conread position: 72-380
Cow position: chrX:3121791-3121481 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 153

Conread position: 72-380
Cow position: chrX:3360927-3361236 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:3372746-3372438 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 76

Conread position: 72-380
Cow position: chrX:3418030-3417722 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 142

Conread position: 72-380
Cow position: chrX:4299849-4299561 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 183, 76

Conread position: 72-380
Cow position: chrX:4342857-4343166 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:4622847-4622539 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 194

Conread position: 72-380
Cow position: chrX:5124253-5123944 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:5280746-5280438 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 67

Conread position: 72-380
Cow position: chrX:5289578-5289271 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 61

Conread position: 72-380
Cow position: chrX:5320610-5320304 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 45

Conread position: 72-380
Cow position: chrX:5332327-5332022 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 210

Conread position: 72-380
Cow position: chrX:5334709-5334404 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 210

Conread position: 72-380
Cow position: chrX:5646998-5646689 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:5866252-5866561 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:6026591-6026286 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 197, 40

Conread position: 72-380
Cow position: chrX:6372286-6372596 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 72-380
Cow position: chrX:6453803-6454112 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:6581041-6581349 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 131

Conread position: 72-380
Cow position: chrX:7096565-7096873 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 9

Conread position: 72-380
Cow position: chrX:7755012-7755316 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 87

Conread position: 72-380
Cow position: chrX:8516704-8517019 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 157, 262

Conread position: 72-380
Cow position: chrX:8529646-8529955 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:8640894-8641203 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:9011437-9011742 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 129

Conread position: 72-380
Cow position: chrX:9128161-9128471 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 72-380
Cow position: chrX:9642326-9642017 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:10059571-10059880 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:10301234-10301537 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 80

Conread position: 72-380
Cow position: chrX:10440720-10440419 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 180

Conread position: 72-380
Cow position: chrX:10445309-10445000 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:10528680-10528359 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 44

Conread position: 72-380
Cow position: chrX:11146227-11145922 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 254

Conread position: 72-380
Cow position: chrX:11409228-11408919 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:11566020-11566329 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:12307656-12307342 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 0

Conread position: 72-380
Cow position: chrX:12359994-12360303 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:13031105-13030796 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:13031544-13031248 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 43

Conread position: 72-380
Cow position: chrX:13069636-13069329 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 248, 9

Conread position: 72-380
Cow position: chrX:13090197-13089890 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 248, 9

Conread position: 72-380
Cow position: chrX:13206061-13206367 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 79

Conread position: 72-380
Cow position: chrX:14125138-14124831 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 127

Conread position: 72-380
Cow position: chrX:14459062-14458752 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 72-380
Cow position: chrX:14462421-14462724 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 98

Conread position: 72-380
Cow position: chrX:14597952-14598261 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:14782239-14781931 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 233

Conread position: 72-380
Cow position: chrX:14801713-14801403 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 140

Conread position: 72-380
Cow position: chrX:15113778-15114086 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 194

Conread position: 72-380
Cow position: chrX:15260513-15260204 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:15621425-15621117 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 87

Conread position: 72-380
Cow position: chrX:15977847-15977538 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:16040573-16040266 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 194

Conread position: 72-380
Cow position: chrX:16046253-16046562 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:16278762-16279067 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 14

Conread position: 72-380
Cow position: chrX:17054674-17054984 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 72-380
Cow position: chrX:17610349-17610044 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 137, 141

Conread position: 72-380
Cow position: chrX:17782606-17782914 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 263

Conread position: 72-380
Cow position: chrX:18222520-18222828 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 52

Conread position: 72-380
Cow position: chrX:18462866-18462560 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 87

Conread position: 72-380
Cow position: chrX:18488608-18488299 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:18656699-18656390 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:19109935-19109626 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:19398884-19399193 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 0

Conread position: 72-380
Cow position: chrX:19474042-19473745 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 74

Conread position: 72-380
Cow position: chrX:19608781-19609091 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 72-380
Cow position: chrX:19877923-19878231 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 44

Conread position: 72-380
Cow position: chrX:20020685-20020992 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 210

Conread position: 72-380
Cow position: chrX:20503747-20504061 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 37

Conread position: 72-380
Cow position: chrX:20652519-20652823 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 222

Conread position: 72-380
Cow position: chrX:20800895-20801188 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 63

Conread position: 72-380
Cow position: chrX:20999163-20998861 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 35

Conread position: 72-380
Cow position: chrX:21343501-21343809 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 258

Conread position: 72-380
Cow position: chrX:21685725-21686034 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:21767906-21768219 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 72-380
Cow position: chrX:22102654-22102359 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 41

Conread position: 72-380
Cow position: chrX:22125749-22125452 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 103, 76

Conread position: 72-380
Cow position: chrX:22887768-22888073 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 21

Conread position: 72-380
Cow position: chrX:23134695-23134993 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 86

Conread position: 72-380
Cow position: chrX:23218180-23218478 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 231, 37

Conread position: 72-380
Cow position: chrX:23269096-23268797 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 122

Conread position: 72-380
Cow position: chrX:23415589-23415280 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 180

Conread position: 72-380
Cow position: chrX:23986356-23986665 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:24174846-24174537 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 17

Conread position: 72-380
Cow position: chrX:24309994-24309697 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 115, 0

Conread position: 72-380
Cow position: chrX:24769750-24769442 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 87

Conread position: 72-380
Cow position: chrX:25282388-25282078 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 72-380
Cow position: chrX:25289573-25289264 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:26275245-26275553 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 55

Conread position: 72-380
Cow position: chrX:26760462-26760153 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:27305035-27305344 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:27318337-27318646 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:27628959-27629265 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 175

Conread position: 72-380
Cow position: chrX:27754534-27754844 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 150

Conread position: 72-380
Cow position: chrX:27758815-27759122 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 96

Conread position: 72-380
Cow position: chrX:28313531-28313840 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:28518614-28518305 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:28588076-28588386 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 72-380
Cow position: chrX:29029595-29029272 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 47

Conread position: 72-380
Cow position: chrX:29083173-29083493 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 72-380
Cow position: chrX:29225584-29225893 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:29908096-29907787 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:29912445-29912754 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:30053362-30053053 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:30089940-30089638 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 180

Conread position: 72-380
Cow position: chrX:30172600-30172292 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 142

Conread position: 72-380
Cow position: chrX:30196404-30196712 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 146

Conread position: 72-380
Cow position: chrX:30199886-30199577 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:30688191-30688480 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 35

Conread position: 72-380
Cow position: chrX:30836493-30836788 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 233

Conread position: 72-380
Cow position: chrX:31978735-31978426 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:32643592-32643901 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:33803889-33803590 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 180

Conread position: 72-380
Cow position: chrX:33822196-33822514 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 116

Conread position: 72-380
Cow position: chrX:34518832-34519141 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:35532961-35533266 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 72-380
Cow position: chrX:36195202-36195507 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 50

Conread position: 72-380
Cow position: chrX:36479529-36479220 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:36535625-36535320 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 128

Conread position: 72-380
Cow position: chrX:36729490-36729799 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:37080412-37080104 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 135

Conread position: 72-380
Cow position: chrX:37852242-37852554 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 72-380
Cow position: chrX:38231161-38230852 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:38330490-38330797 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 76

Conread position: 72-380
Cow position: chrX:38793469-38793764 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 285, 62

Conread position: 72-380
Cow position: chrX:38961744-38961431 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 72-380
Cow position: chrX:39293112-39292803 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:39352512-39352229 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 274, 37

Conread position: 72-380
Cow position: chrX:39463941-39463625 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 71, 98

Conread position: 72-380
Cow position: chrX:39713657-39713966 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:39731031-39730724 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 65

Conread position: 72-380
Cow position: chrX:40496475-40496163 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 57

Conread position: 72-380
Cow position: chrX:44053923-44054218 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 62

Conread position: 72-380
Cow position: chrX:45236572-45236881 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-380
Cow position: chrX:45903284-45903592 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 9

Conread position: 72-380
Cow position: chrX:46296768-46297075 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 21

Conread position: 72-381
Cow position: chrX:509037-508738 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 33

Conread position: 72-381
Cow position: chrX:2008592-2008294 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 64

Conread position: 72-381
Cow position: chrX:2479522-2479211 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 187

Conread position: 72-381
Cow position: chrX:3211430-3211129 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 56

Conread position: 72-381
Cow position: chrX:5392469-5392159 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-381
Cow position: chrX:7277055-7277350 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 123, 10

Conread position: 72-381
Cow position: chrX:7809887-7809593 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 284, 72

Conread position: 72-381
Cow position: chrX:8435096-8434787 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 124

Conread position: 72-381
Cow position: chrX:9899232-9898925 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 62

Conread position: 72-381
Cow position: chrX:11074077-11073792 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 243, 14

Conread position: 72-381
Cow position: chrX:13406180-13405874 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 112

Conread position: 72-381
Cow position: chrX:14162298-14162608 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-381
Cow position: chrX:15140430-15140132 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 188

Conread position: 72-381
Cow position: chrX:16525896-16526205 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 270

Conread position: 72-381
Cow position: chrX:18898543-18898233 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-381
Cow position: chrX:20953639-20953949 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-381
Cow position: chrX:21592397-21592703 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 0

Conread position: 72-381
Cow position: chrX:22612509-22612801 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 130

Conread position: 72-381
Cow position: chrX:23969460-23969767 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 72

Conread position: 72-381
Cow position: chrX:24280026-24280319 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 158

Conread position: 72-381
Cow position: chrX:24292557-24292263 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 100

Conread position: 72-381
Cow position: chrX:24442133-24441823 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-381
Cow position: chrX:25204442-25204751 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 265

Conread position: 72-381
Cow position: chrX:25451444-25451738 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 26

Conread position: 72-381
Cow position: chrX:27095235-27095535 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 205

Conread position: 72-381
Cow position: chrX:27704705-27705014 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 180

Conread position: 72-381
Cow position: chrX:27983247-27982954 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 284, 105

Conread position: 72-381
Cow position: chrX:28156638-28156951 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 131

Conread position: 72-381
Cow position: chrX:29790711-29790405 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 76

Conread position: 72-381
Cow position: chrX:30180818-30180511 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 106

Conread position: 72-381
Cow position: chrX:30229007-30228698 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 152

Conread position: 72-381
Cow position: chrX:31372568-31372878 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 149

Conread position: 72-381
Cow position: chrX:34553853-34554152 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 72-381
Cow position: chrX:34761172-34761482 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-381
Cow position: chrX:38150794-38151104 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-381
Cow position: chrX:39185279-39185589 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-381
Cow position: chrX:39939647-39939338 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 77

Conread position: 72-381
Cow position: chrX:40268587-40268892 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 110

Conread position: 72-381
Cow position: chrX:40560434-40560129 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 76

Conread position: 72-381
Cow position: chrX:41527408-41527092 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 181

Conread position: 72-381
Cow position: chrX:42732978-42733282 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 214

Conread position: 72-381
Cow position: chrX:43789715-43789423 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 284, 37

Conread position: 72-381
Cow position: chrX:44901247-44901560 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 34

Conread position: 72-382
Cow position: chrX:11855271-11855586 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 72-383
Cow position: chrX:3649713-3649405 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 14

Conread position: 72-383
Cow position: chrX:17891652-17891957 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 256

Conread position: 72-383
Cow position: chrX:22579281-22578971 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 233

Conread position: 72-385
Cow position: chrX:13178501-13178174 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 15

Conread position: 72-385
Cow position: chrX:16087017-16086703 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 72-386
Cow position: chrX:27450943-27450639 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 179

Conread position: 72-388
Cow position: chrX:1056281-1055965 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 181

Conread position: 72-388
Cow position: chrX:31261527-31261210 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 81

Conread position: 72-389
Cow position: chrX:18455664-18455358 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 180

Conread position: 72-392
Cow position: chrX:4406989-4407329 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 210
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 179, 0

Conread position: 72-394
Cow position: chrX:3464970-3464646 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 66

Conread position: 72-394
Cow position: chrX:6870458-6870133 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 72-394
Cow position: chrX:38852267-38852589 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 77

Conread position: 72-405
Cow position: chrX:33721212-33720872 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 177
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 0

Conread position: 73-265
Cow position: chrX:45400912-45400717 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 45

Conread position: 73-315
Cow position: chrX:21662149-21662385 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 61

Conread position: 73-349
Cow position: chrX:37134526-37134254 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 73-378
Cow position: chrX:11744375-11744681 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 14

Conread position: 73-380
Cow position: chrX:16465408-16465715 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 170

Conread position: 73-380
Cow position: chrX:35935665-35935368 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 279, 42

Conread position: 73-381
Cow position: chrX:25459532-25459223 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 206

Conread position: 73-386
Cow position: chrX:35829657-35829346 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 147, 14

Conread position: 73-391
Cow position: chrX:47000547-47000227 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 77

Conread position: 74-190
Cow position: chrX:16803759-16803643 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 74-281
Cow position: chrX:43074991-43075190 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 147, 0

Conread position: 74-286
Cow position: chrX:12651712-12651500 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 203, 138

Conread position: 74-354
Cow position: chrX:16808706-16808426 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 74-380
Cow position: chrX:13928634-13928336 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 156

Conread position: 74-380
Cow position: chrX:28753228-28752925 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 126

Conread position: 75-228
Cow position: chrX:47380394-47380238 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 75-247
Cow position: chrX:2466202-2466034 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 75-355
Cow position: chrX:47988696-47988972 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 102, 69

Conread position: 75-379
Cow position: chrX:24483254-24482955 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 64

Conread position: 75-380
Cow position: chrX:26974019-26974325 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 0

Conread position: 75-381
Cow position: chrX:6406462-6406762 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 111

Conread position: 75-381
Cow position: chrX:22819187-22819471 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 167, 139

Conread position: 76-250
Cow position: chrX:22809359-22809537 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 76-283
Cow position: chrX:21818354-21818164 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 76-292
Cow position: chrX:15993554-15993769 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 197, 0

Conread position: 76-335
Cow position: chrX:25015353-25015098 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 41

Conread position: 76-336
Cow position: chrX:26447196-26447449 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 76-341
Cow position: chrX:30135232-30134964 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 213, 95

Conread position: 76-352
Cow position: chrX:17158700-17158432 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 73

Conread position: 76-355
Cow position: chrX:25146675-25146942 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 76-355
Cow position: chrX:44428632-44428366 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 76-365
Cow position: chrX:24826120-24826404 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 64

Conread position: 76-378
Cow position: chrX:19929544-19929848 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 179

Conread position: 76-378
Cow position: chrX:37404124-37403823 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 176

Conread position: 76-379
Cow position: chrX:38935532-38935840 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 73

Conread position: 76-380
Cow position: chrX:4482072-4482368 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 22

Conread position: 76-380
Cow position: chrX:7805491-7805792 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 73

Conread position: 76-380
Cow position: chrX:11522090-11522385 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 281, 52

Conread position: 76-380
Cow position: chrX:12640481-12640775 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 283, 33

Conread position: 76-380
Cow position: chrX:20363034-20362735 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 156

Conread position: 76-380
Cow position: chrX:23974328-23974028 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 21, 47

Conread position: 76-380
Cow position: chrX:25280714-25280406 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 83

Conread position: 76-380
Cow position: chrX:38228207-38227896 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 76-380
Cow position: chrX:40225130-40224827 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 126

Conread position: 76-380
Cow position: chrX:45658967-45658660 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 259

Conread position: 76-381
Cow position: chrX:9438618-9438922 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 246, 92

Conread position: 76-381
Cow position: chrX:12465142-12465448 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 0

Conread position: 76-381
Cow position: chrX:18244095-18244398 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 176

Conread position: 76-381
Cow position: chrX:27590920-27590618 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 198

Conread position: 76-381
Cow position: chrX:28133208-28133530 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 33

Conread position: 76-381
Cow position: chrX:28633353-28633060 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 29

Conread position: 76-381
Cow position: chrX:30164128-30163822 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 0

Conread position: 76-381
Cow position: chrX:31201952-31202257 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 83

Conread position: 76-381
Cow position: chrX:35609087-35609404 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 76-381
Cow position: chrX:39559249-39558949 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 65

Conread position: 76-381
Cow position: chrX:41847420-41847118 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 202

Conread position: 76-385
Cow position: chrX:24202140-24202447 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 76, 29

Conread position: 76-388
Cow position: chrX:21226587-21226900 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 0

Conread position: 76-394
Cow position: chrX:24006719-24006399 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 0

Conread position: 76-394
Cow position: chrX:41879819-41879501 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 179

Conread position: 77-215
Cow position: chrX:45042539-45042679 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 77-240
Cow position: chrX:26622709-26622548 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 77-261
Cow position: chrX:25817718-25817527 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 41, 124

Conread position: 77-262
Cow position: chrX:4130476-4130291 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 77-271
Cow position: chrX:6235740-6235551 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 77-302
Cow position: chrX:29288109-29288333 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 163, 57

Conread position: 77-380
Cow position: chrX:5406171-5406475 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 0

Conread position: 77-380
Cow position: chrX:40581052-40580748 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 0

Conread position: 77-381
Cow position: chrX:10866752-10866451 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 21

Conread position: 77-381
Cow position: chrX:12996752-12996439 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 19

Conread position: 77-381
Cow position: chrX:17793963-17794245 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 71

Conread position: 77-381
Cow position: chrX:22601299-22600999 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 123

Conread position: 77-381
Cow position: chrX:23022423-23022729 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 77-382
Cow position: chrX:28879482-28879189 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 63

Conread position: 78-250
Cow position: chrX:13414693-13414522 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 78-365
Cow position: chrX:40070499-40070210 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 70

Conread position: 78-380
Cow position: chrX:18769032-18769324 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 278, 73

Conread position: 78-380
Cow position: chrX:29942269-29942565 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 74

Conread position: 78-381
Cow position: chrX:6543377-6543681 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 20

Conread position: 78-381
Cow position: chrX:15151563-15151260 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 78-381
Cow position: chrX:29722344-29722632 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 66

Conread position: 78-381
Cow position: chrX:35388807-35388491 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 78-406
Cow position: chrX:47986605-47986936 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 74

Conread position: 79-338
Cow position: chrX:5365481-5365227 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 187, 0

Conread position: 79-378
Cow position: chrX:17265923-17265631 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 6, 136

Conread position: 79-379
Cow position: chrX:12289835-12290152 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 48

Conread position: 79-380
Cow position: chrX:20131765-20131469 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 106

Conread position: 81-379
Cow position: chrX:1729742-1729448 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 20

Conread position: 82-277
Cow position: chrX:28605974-28605785 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 82-380
Cow position: chrX:37753529-37753809 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 82-381
Cow position: chrX:24425399-24425099 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 83-378
Cow position: chrX:40601245-40601532 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 35, 55

Conread position: 83-385
Cow position: chrX:40384172-40384466 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 55

Conread position: 84-380
Cow position: chrX:20032713-20032416 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 0

Conread position: 86-384
Cow position: chrX:8104161-8103879 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 176, 106

Conread position: 87-379
Cow position: chrX:2300003-2300294 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 112

Conread position: 87-380
Cow position: chrX:29170221-29169926 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 87-382
Cow position: chrX:7177784-7178080 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 37, 174

Conread position: 89-379
Cow position: chrX:19657620-19657911 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 0

Conread position: 89-380
Cow position: chrX:30422012-30421733 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 39

Conread position: 89-381
Cow position: chrX:35847348-35847640 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 275

Conread position: 90-355
Cow position: chrX:9535890-9536148 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 48

Conread position: 90-379
Cow position: chrX:9837255-9837532 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 58

Conread position: 92-380
Cow position: chrX:37886208-37885925 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 38

Conread position: 92-383
Cow position: chrX:42042260-42041968 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 190

Conread position: 93-357
Cow position: chrX:13135291-13135033 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 167, 60

Conread position: 93-378
Cow position: chrX:3096626-3096341 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 95-380
Cow position: chrX:13800689-13800408 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 10, 18

Conread position: 95-380
Cow position: chrX:24174032-24173750 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 189

Conread position: 96-342
Cow position: chrX:13536923-13537168 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 204, 0

Conread position: 96-380
Cow position: chrX:16552937-16553207 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 261, 104

Conread position: 97-380
Cow position: chrX:6089243-6088980 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 260, 30

Conread position: 98-379
Cow position: chrX:16688400-16688682 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 98-379
Cow position: chrX:25198581-25198855 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 218, 19

Conread position: 98-380
Cow position: chrX:2932586-2932305 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 56

Conread position: 98-380
Cow position: chrX:21973071-21973358 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 47

Conread position: 98-380
Cow position: chrX:36839838-36840117 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 154

Conread position: 98-380
Cow position: chrX:37815723-37816006 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 98-381
Cow position: chrX:22604305-22604022 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 70

Conread position: 98-381
Cow position: chrX:37488861-37489141 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 160

Conread position: 99-378
Cow position: chrX:11405827-11406095 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 17

Conread position: 100-378
Cow position: chrX:22871254-22871527 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 154

Conread position: 101-379
Cow position: chrX:21031048-21031331 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 11

Conread position: 101-380
Cow position: chrX:2274055-2274332 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 204

Conread position: 101-380
Cow position: chrX:30113198-30113473 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 11

Conread position: 101-381
Cow position: chrX:12095451-12095169 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 147, 38

Conread position: 103-326
Cow position: chrX:13071443-13071221 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 197, 0

Conread position: 103-326
Cow position: chrX:13092003-13091781 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 197, 0

Conread position: 103-341
Cow position: chrX:17487461-17487224 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 15

Conread position: 103-380
Cow position: chrX:2790374-2790652 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 163, 141

Conread position: 103-380
Cow position: chrX:34008888-34009162 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 159, 137

Conread position: 103-381
Cow position: chrX:34237915-34238190 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 127, 119

Conread position: 104-341
Cow position: chrX:33827901-33827657 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 69, 159

Conread position: 104-380
Cow position: chrX:9169476-9169199 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 109-280
Cow position: chrX:25360194-25360364 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 12

Conread position: 109-355
Cow position: chrX:23697262-23697012 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 168

Conread position: 109-379
Cow position: chrX:21667160-21666896 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 27, 70

Conread position: 109-379
Cow position: chrX:37544131-37544393 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 248, 25

Conread position: 109-380
Cow position: chrX:3596606-3596878 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 109-380
Cow position: chrX:5892371-5892643 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 109-380
Cow position: chrX:29842024-29841754 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 90

Conread position: 109-380
Cow position: chrX:34253372-34253644 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 109-380
Cow position: chrX:38140893-38140626 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 246, 8

Conread position: 109-381
Cow position: chrX:5639783-5639521 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 58

Conread position: 110-380
Cow position: chrX:30139640-30139369 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 111-380
Cow position: chrX:5649258-5648979 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 137, 258

Conread position: 111-380
Cow position: chrX:7444051-7444322 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 111-380
Cow position: chrX:24509012-24509282 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 0

Conread position: 111-380
Cow position: chrX:30824793-30825063 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 0

Conread position: 111-394
Cow position: chrX:30751921-30752205 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 155

Conread position: 114-380
Cow position: chrX:20974211-20974470 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 243, 20

Conread position: 114-381
Cow position: chrX:160578-160844 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 132

Conread position: 115-359
Cow position: chrX:5293692-5293454 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 39

Conread position: 115-379
Cow position: chrX:11588544-11588272 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 46

Conread position: 116-380
Cow position: chrX:27408309-27408047 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 238, 53

Conread position: 118-380
Cow position: chrX:40788287-40788549 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 30

Conread position: 118-380
Cow position: chrX:41114360-41114616 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 43

Conread position: 118-381
Cow position: chrX:32419335-32419587 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 71

Conread position: 119-380
Cow position: chrX:33763497-33763759 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 0

Conread position: 122-380
Cow position: chrX:336855-337111 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 249, 85

Conread position: 122-380
Cow position: chrX:37795319-37795063 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 235, 200

Conread position: 123-378
Cow position: chrX:41106845-41106596 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 156, 121

Conread position: 123-379
Cow position: chrX:33836660-33836908 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 76

Conread position: 123-379
Cow position: chrX:40516668-40516914 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 123-380
Cow position: chrX:15306715-15306458 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 196, 114

Conread position: 123-380
Cow position: chrX:24923014-24923265 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 234, 135

Conread position: 123-381
Cow position: chrX:30144127-30143868 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 0

Conread position: 124-379
Cow position: chrX:23586964-23587213 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 32, 24

Conread position: 124-380
Cow position: chrX:24735110-24735359 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 212, 76

Conread position: 124-380
Cow position: chrX:30817111-30816854 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 125-380
Cow position: chrX:11890016-11889767 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 177, 13

Conread position: 125-380
Cow position: chrX:20742151-20742402 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 162

Conread position: 126-380
Cow position: chrX:34719673-34719928 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 127-335
Cow position: chrX:45364622-45364407 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 0

Conread position: 128-380
Cow position: chrX:6673541-6673791 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 229, 128

Conread position: 128-381
Cow position: chrX:34990226-34990477 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 20

Conread position: 129-379
Cow position: chrX:27996814-27997065 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 0

Conread position: 129-380
Cow position: chrX:32182862-32182619 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 36

Conread position: 129-380
Cow position: chrX:40707637-40707883 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 227, 19

Conread position: 130-381
Cow position: chrX:11083442-11083194 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 177

Conread position: 130-381
Cow position: chrX:20878603-20878349 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 136-350
Cow position: chrX:33965507-33965301 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 136-380
Cow position: chrX:21318855-21319093 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 165, 14

Conread position: 136-380
Cow position: chrX:28079964-28080205 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 15

Conread position: 136-380
Cow position: chrX:28327298-28327053 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 0

Conread position: 137-380
Cow position: chrX:362282-362038 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 139-380
Cow position: chrX:46093646-46093410 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 43

Conread position: 140-381
Cow position: chrX:11613678-11613925 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 158

Conread position: 140-381
Cow position: chrX:36794180-36794410 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 171

Conread position: 142-381
Cow position: chrX:16854210-16853974 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 184

Conread position: 144-372
Cow position: chrX:36513355-36513581 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 182

Conread position: 144-380
Cow position: chrX:2763750-2763979 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 216, 48

Conread position: 145-324
Cow position: chrX:42010228-42010408 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 39

Conread position: 145-380
Cow position: chrX:40278995-40279224 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 211, 108

Conread position: 145-387
Cow position: chrX:26633899-26633658 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 220, 191

Conread position: 148-340
Cow position: chrX:19163641-19163449 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 67

Conread position: 148-346
Cow position: chrX:3569233-3569432 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 187, 0

Conread position: 148-355
Cow position: chrX:5667855-5667649 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 40, 29

Conread position: 148-377
Cow position: chrX:19650319-19650097 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 209, 172

Conread position: 148-378
Cow position: chrX:1343083-1342855 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 84

Conread position: 148-378
Cow position: chrX:37682128-37681898 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 85

Conread position: 148-379
Cow position: chrX:19556206-19556429 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 209, 57

Conread position: 148-379
Cow position: chrX:19880182-19880411 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 146, 59

Conread position: 148-380
Cow position: chrX:3952036-3952267 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 206, 119

Conread position: 148-380
Cow position: chrX:11509018-11509253 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 110

Conread position: 148-380
Cow position: chrX:16517950-16517717 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 148-380
Cow position: chrX:18451897-18451664 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 148-380
Cow position: chrX:18987633-18987853 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 208, 76

Conread position: 148-380
Cow position: chrX:37959797-37960019 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 209, 96

Conread position: 148-381
Cow position: chrX:10438744-10438522 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 101

Conread position: 148-381
Cow position: chrX:29779905-29780143 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 117, 214

Conread position: 148-381
Cow position: chrX:36250677-36250448 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 148-381
Cow position: chrX:37781886-37781661 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 114, 120

Conread position: 148-381
Cow position: chrX:39387248-39387016 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 210

Conread position: 148-381
Cow position: chrX:40545440-40545206 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 96

Conread position: 148-385
Cow position: chrX:12033737-12033503 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 120, 62

Conread position: 149-379
Cow position: chrX:45661768-45661998 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 138

Conread position: 149-380
Cow position: chrX:34866662-34866417 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 81, 42

Conread position: 150-374
Cow position: chrX:35408820-35409044 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 27

Conread position: 150-380
Cow position: chrX:42539788-42540014 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 88

Conread position: 151-381
Cow position: chrX:13786193-13785967 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 152-352
Cow position: chrX:23121585-23121794 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 120, 35

Conread position: 152-381
Cow position: chrX:38007799-38007566 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 155-380
Cow position: chrX:2185437-2185655 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 201, 96

Conread position: 156-381
Cow position: chrX:27445867-27446091 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 144

Conread position: 157-379
Cow position: chrX:4177013-4177233 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 199, 97

Conread position: 158-380
Cow position: chrX:20580355-20580135 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 44

Conread position: 159-379
Cow position: chrX:23522300-23522084 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 198, 146

Conread position: 159-380
Cow position: chrX:6492928-6493147 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 92

Conread position: 159-380
Cow position: chrX:10931865-10932088 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 159-380
Cow position: chrX:13524402-13524186 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 197, 18

Conread position: 159-380
Cow position: chrX:28706295-28706517 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 159-381
Cow position: chrX:45112880-45113091 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 197, 83

Conread position: 159-385
Cow position: chrX:5303567-5303340 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 169, 0

Conread position: 159-402
Cow position: chrX:13719199-13719442 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 198, 124

Conread position: 160-347
Cow position: chrX:28110416-28110604 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 55

Conread position: 160-352
Cow position: chrX:24129500-24129691 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 160-355
Cow position: chrX:40571728-40571539 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 160-381
Cow position: chrX:40827545-40827328 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 196, 92

Conread position: 161-380
Cow position: chrX:11112438-11112218 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 26

Conread position: 161-380
Cow position: chrX:15346774-15346554 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 161-380
Cow position: chrX:21500824-21501033 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 196, 82

Conread position: 162-355
Cow position: chrX:40478602-40478797 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 151

Conread position: 163-295
Cow position: chrX:19128019-19127887 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 164-372
Cow position: chrX:10976227-10976428 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 43

Conread position: 164-380
Cow position: chrX:67147-67367 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 167-380
Cow position: chrX:5841495-5841712 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 82, 118

Conread position: 168-376
Cow position: chrX:5426515-5426306 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 188, 0

Conread position: 168-380
Cow position: chrX:2146302-2146507 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 188, 59

Conread position: 168-380
Cow position: chrX:28559632-28559419 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 169-382
Cow position: chrX:5375567-5375780 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 187, 202

Conread position: 172-380
Cow position: chrX:38999111-38999318 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 84

Conread position: 174-359
Cow position: chrX:7571083-7571264 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 182, 78

Conread position: 175-380
Cow position: chrX:38839840-38840048 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 87, 134

Conread position: 181-380
Cow position: chrX:24321051-24320857 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 175, 50

Conread position: 185-381
Cow position: chrX:45464668-45464862 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 77, 0

Conread position: 186-379
Cow position: chrX:2365884-2366079 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 60

Conread position: 188-344
Cow position: chrX:28058591-28058746 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 188-380
Cow position: chrX:31605126-31604933 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 188-381
Cow position: chrX:44929824-44930018 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 125, 58

Conread position: 189-380
Cow position: chrX:7695007-7695195 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 34

Conread position: 190-378
Cow position: chrX:12092802-12092614 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 164, 129

Conread position: 192-376
Cow position: chrX:28214286-28214470 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 192-378
Cow position: chrX:6836027-6835847 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 164, 62

Conread position: 192-380
Cow position: chrX:22409506-22409305 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 36

Conread position: 192-381
Cow position: chrX:11819590-11819780 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 156
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 81, 116

Conread position: 193-380
Cow position: chrX:7748116-7747933 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 45

Conread position: 197-338
Cow position: chrX:833573-833428 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 197-359
Cow position: chrX:5246450-5246612 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 159, 93

Conread position: 200-380
Cow position: chrX:12097530-12097710 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 19

Conread position: 201-381
Cow position: chrX:4767959-4768132 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 32

Conread position: 202-380
Cow position: chrX:38052196-38052017 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 154, 0

Conread position: 203-380
Cow position: chrX:1793928-1793753 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 153, 47

Conread position: 203-380
Cow position: chrX:26844744-26844920 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 67, 155

Conread position: 204-379
Cow position: chrX:37948998-37949170 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 14

Conread position: 204-380
Cow position: chrX:26617683-26617506 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 147
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 152, 0

Conread position: 205-380
Cow position: chrX:32330870-32331046 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 6

Conread position: 205-381
Cow position: chrX:44206201-44206379 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 206-380
Cow position: chrX:7119404-7119229 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 206-380
Cow position: chrX:29752123-29752293 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 25

Conread position: 206-386
Cow position: chrX:20976812-20976626 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 209-378
Cow position: chrX:12457941-12458111 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 141
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 147, 0

Conread position: 211-381
Cow position: chrX:39698249-39698419 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 144, 16

Conread position: 212-377
Cow position: chrX:3249490-3249331 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 145, 39

Conread position: 212-380
Cow position: chrX:516752-516926 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 212-381
Cow position: chrX:22963566-22963395 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 55

Conread position: 213-380
Cow position: chrX:486213-486376 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 144, 38

Conread position: 214-379
Cow position: chrX:19211291-19211120 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 38, 59

Conread position: 214-379
Cow position: chrX:47380210-47380046 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 69

Conread position: 214-380
Cow position: chrX:27385682-27385519 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 142, 45

Conread position: 214-385
Cow position: chrX:32194846-32194675 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 107

Conread position: 215-379
Cow position: chrX:42466774-42466611 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 215-380
Cow position: chrX:22521972-22521806 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 141, 0

Conread position: 215-380
Cow position: chrX:38014343-38014509 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 137
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 141, 0

Conread position: 215-385
Cow position: chrX:10146420-10146247 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 216-380
Cow position: chrX:16285461-16285626 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 140, 0

Conread position: 216-394
Cow position: chrX:5305851-5306031 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 139, 0

Conread position: 217-373
Cow position: chrX:32057660-32057504 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 139, 11

Conread position: 217-380
Cow position: chrX:22140434-22140277 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 75, 35

Conread position: 217-381
Cow position: chrX:40187237-40187392 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 70

Conread position: 218-380
Cow position: chrX:12001895-12001732 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 139
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 138, 0

Conread position: 219-381
Cow position: chrX:2701582-2701421 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 24

Conread position: 221-380
Cow position: chrX:26506686-26506526 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 135
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 135, 0

Conread position: 221-381
Cow position: chrX:28542624-28542477 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 224-379
Cow position: chrX:33668991-33669147 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 132, 0

Conread position: 225-380
Cow position: chrX:16355106-16354945 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 225-381
Cow position: chrX:4414288-4414437 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 96

Conread position: 225-381
Cow position: chrX:6645821-6645977 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 33

Conread position: 226-381
Cow position: chrX:10915294-10915454 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 228-380
Cow position: chrX:10465047-10465200 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 129
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 128, 0

Conread position: 230-354
Cow position: chrX:730089-729969 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 231-380
Cow position: chrX:15173259-15173109 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 10

Conread position: 231-380
Cow position: chrX:41886093-41886243 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 130
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 125, 0

Conread position: 232-379
Cow position: chrX:11674321-11674470 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 79

Conread position: 232-380
Cow position: chrX:10923305-10923156 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 128
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 124, 0

Conread position: 232-380
Cow position: chrX:37955168-37955316 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 53

Conread position: 232-381
Cow position: chrX:10256877-10256726 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 130

Conread position: 234-380
Cow position: chrX:37943464-37943320 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 132, 0

Conread position: 235-380
Cow position: chrX:6202773-6202922 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 235-380
Cow position: chrX:30430091-30429943 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 237-381
Cow position: chrX:45042823-45042971 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 239-380
Cow position: chrX:17283036-17282892 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 239-380
Cow position: chrX:26622369-26622225 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 244-379
Cow position: chrX:21196300-21196436 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 29

Conread position: 244-380
Cow position: chrX:37065976-37066111 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 50

Conread position: 244-381
Cow position: chrX:31488794-31488930 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 66

Conread position: 245-380
Cow position: chrX:1002279-1002411 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 61

Conread position: 245-380
Cow position: chrX:6655001-6654865 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 245-381
Cow position: chrX:4633580-4633440 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 245-381
Cow position: chrX:9854557-9854689 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 60

Conread position: 245-381
Cow position: chrX:9953399-9953531 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 14

Conread position: 245-381
Cow position: chrX:20888326-20888193 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 42

Conread position: 245-381
Cow position: chrX:22812341-22812478 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 0

Conread position: 247-476
Cow position: chrX:36376853-36377083 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 101
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 248-381
Cow position: chrX:22116124-22115989 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 249-380
Cow position: chrX:32039555-32039427 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 112
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 107, 38

Conread position: 251-381
Cow position: chrX:1331227-1331358 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 254-380
Cow position: chrX:11358777-11358650 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 112
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 255-391
Cow position: chrX:15439345-15439211 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 258-379
Cow position: chrX:28097463-28097587 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 258-380
Cow position: chrX:25360857-25360977 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 24

Conread position: 258-380
Cow position: chrX:30821876-30821999 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 108
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 258-388
Cow position: chrX:3154987-3154858 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 9

Conread position: 260-378
Cow position: chrX:28608717-28608599 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 16

Conread position: 260-380
Cow position: chrX:7486158-7486279 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 107
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 260-380
Cow position: chrX:13971945-13971824 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 106
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 262-379
Cow position: chrX:3582480-3582598 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 262-380
Cow position: chrX:1810861-1810745 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 46

Conread position: 266-380
Cow position: chrX:44052202-44052317 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 267-378
Cow position: chrX:11798773-11798886 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 101

Conread position: 267-378
Cow position: chrX:17631529-17631420 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 12

Conread position: 267-379
Cow position: chrX:3145304-3145417 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 267-379
Cow position: chrX:17889582-17889468 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 267-380
Cow position: chrX:1576962-1576848 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 102
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 267-380
Cow position: chrX:4630398-4630284 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 267-380
Cow position: chrX:16478216-16478330 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 102
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 267-380
Cow position: chrX:17291235-17291345 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 59

Conread position: 267-380
Cow position: chrX:21625678-21625564 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 267-380
Cow position: chrX:23987845-23987959 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 267-380
Cow position: chrX:26230212-26230101 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 101
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 89, 38

Conread position: 267-380
Cow position: chrX:29064720-29064828 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 267-381
Cow position: chrX:29049284-29049396 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 18

Conread position: 267-381
Cow position: chrX:33538232-33538343 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 101
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 89, 51

Conread position: 267-395
Cow position: chrX:1960517-1960646 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 268-368
Cow position: chrX:5566537-5566435 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 268-380
Cow position: chrX:487839-487952 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 268-380
Cow position: chrX:13057856-13057971 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 268-380
Cow position: chrX:19228766-19228654 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 89, 67

Conread position: 268-380
Cow position: chrX:42120605-42120718 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 100
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 268-381
Cow position: chrX:10329113-10329227 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 268-381
Cow position: chrX:24125641-24125755 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 268-383
Cow position: chrX:45421698-45421581 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 268-388
Cow position: chrX:6235315-6235202 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 40

Conread position: 269-379
Cow position: chrX:32071378-32071267 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 269-380
Cow position: chrX:1976294-1976182 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 101
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 0

Conread position: 270-379
Cow position: chrX:28766384-28766274 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 270-380
Cow position: chrX:30965405-30965516 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 100
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 271-380
Cow position: chrX:5408360-5408470 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 99
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 272-382
Cow position: chrX:41434098-41433988 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 52

Conread position: 274-380
Cow position: chrX:19636201-19636308 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 275-385
Cow position: chrX:43450395-43450505 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 90

Conread position: 278-380
Cow position: chrX:27594868-27594765 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 278-381
Cow position: chrX:26764780-26764676 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 279-380
Cow position: chrX:10427849-10427951 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 279-381
Cow position: chrX:14924363-14924468 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 280-379
Cow position: chrX:27117284-27117378 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 280-381
Cow position: chrX:24317382-24317483 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 56

Conread position: 284-380
Cow position: chrX:18024358-18024455 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 287-381
Cow position: chrX:22869584-22869489 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 288-380
Cow position: chrX:9018981-9018888 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 289-380
Cow position: chrX:936402-936494 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 290-380
Cow position: chrX:18078587-18078496 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 290-380
Cow position: chrX:20792424-20792514 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 9

Conread position: 291-381
Cow position: chrX:38072442-38072351 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 292-380
Cow position: chrX:14030344-14030433 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 293-381
Cow position: chrX:41103119-41103208 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 294-394
Cow position: chrX:9086005-9085903 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 296-379
Cow position: chrX:19775150-19775066 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Show alignments to all cow chromosomes.