Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C06.5 |
| Conread position: | 438-748 |
| Cow position: | chr12:6247984-6248287 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 491-751 |
| Cow position: | chr12:46643482-46643734 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 493-748 |
| Cow position: | chr12:7929675-7929930 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 495-717 |
| Cow position: | chr12:4718397-4718185 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 101, 44 |
| Conread position: | 498-663 |
| Cow position: | chr12:29476662-29476827 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 498-749 |
| Cow position: | chr12:22968951-22968708 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 499-746 |
| Cow position: | chr12:25166220-25165969 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 515-743 |
| Cow position: | chr12:18496095-18496322 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 515-753 |
| Cow position: | chr12:35251214-35250973 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 520-748 |
| Cow position: | chr12:37525062-37525277 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 540-744 |
| Cow position: | chr12:9581176-9581380 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 172 |
| Conread position: | 550-748 |
| Cow position: | chr12:5895582-5895781 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 551-738 |
| Cow position: | chr12:13135379-13135564 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 552-748 |
| Cow position: | chr12:22707908-22708100 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 552-748 |
| Cow position: | chr12:38415277-38415077 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 553-736 |
| Cow position: | chr12:31586743-31586929 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 558-747 |
| Cow position: | chr12:19003709-19003897 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 147 |
| Conread position: | 634-748 |
| Cow position: | chr12:24431606-24431493 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.