Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C06.5 |
| Conread position: | 484-748 |
| Cow position: | chr16:28604386-28604649 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 491-750 |
| Cow position: | chr16:5624787-5625042 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 103, 10 |
| Conread position: | 491-762 |
| Cow position: | chr16:12278100-12277831 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 105, 10 |
| Conread position: | 492-702 |
| Cow position: | chr16:16300154-16300357 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 492-717 |
| Cow position: | chr16:35293169-35293397 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 110, 8 |
| Conread position: | 498-748 |
| Cow position: | chr16:12363303-12363044 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 499-694 |
| Cow position: | chr16:14711981-14711788 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 58 |
| Conread position: | 503-748 |
| Cow position: | chr16:37134061-37134312 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 126 |
| Conread position: | 511-747 |
| Cow position: | chr16:3020361-3020120 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 29, 118 |
| Conread position: | 517-742 |
| Cow position: | chr16:20111322-20111100 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 524-746 |
| Cow position: | chr16:40503510-40503733 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 57, 62 |
| Conread position: | 525-746 |
| Cow position: | chr16:36161304-36161082 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 526-751 |
| Cow position: | chr16:21705295-21705070 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 70, 100 |
| Conread position: | 540-748 |
| Cow position: | chr16:10262519-10262316 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 547-717 |
| Cow position: | chr16:54619510-54619338 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 78 |
| Conread position: | 549-749 |
| Cow position: | chr16:25325696-25325492 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 550-732 |
| Cow position: | chr16:42009006-42009185 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 6, 77 |
| Conread position: | 551-708 |
| Cow position: | chr16:32338679-32338525 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 51 |
| Conread position: | 552-738 |
| Cow position: | chr16:50953388-50953575 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 552-748 |
| Cow position: | chr16:21905810-21906003 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 154, 79 |
| Conread position: | 554-747 |
| Cow position: | chr16:18346584-18346775 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 555-748 |
| Cow position: | chr16:13168576-13168770 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 557-749 |
| Cow position: | chr16:18057380-18057192 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 564-748 |
| Cow position: | chr16:14234076-14233890 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 565-750 |
| Cow position: | chr16:36735053-36734875 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 570-748 |
| Cow position: | chr16:7314075-7314255 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 34 |
Show alignments to all cow chromosomes.