Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C06.5 |
| Conread position: | 480-750 |
| Cow position: | chr18:19375728-19375462 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 483-748 |
| Cow position: | chr18:4699827-4700093 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 484-763 |
| Cow position: | chr18:12029549-12029825 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 487-731 |
| Cow position: | chr18:35024032-35024268 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 487-741 |
| Cow position: | chr18:45634932-45634679 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 488-730 |
| Cow position: | chr18:48646326-48646092 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 491-683 |
| Cow position: | chr18:55425748-55425558 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 497-666 |
| Cow position: | chr18:31536347-31536515 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 505-685 |
| Cow position: | chr18:35035677-35035496 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 505-743 |
| Cow position: | chr18:24322753-24322515 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 12, 116 |
| Conread position: | 505-751 |
| Cow position: | chr18:18712972-18713217 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 89, 128 |
| Conread position: | 506-745 |
| Cow position: | chr18:738823-739059 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 148, 41 |
| Conread position: | 518-749 |
| Cow position: | chr18:30728940-30728710 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 523-738 |
| Cow position: | chr18:5499076-5499288 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 523-746 |
| Cow position: | chr18:39703964-39703736 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 71, 212 |
| Conread position: | 525-746 |
| Cow position: | chr18:36751596-36751361 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 525-755 |
| Cow position: | chr18:25904511-25904283 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 541-747 |
| Cow position: | chr18:23858298-23858506 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 87 |
| Conread position: | 546-749 |
| Cow position: | chr18:45712962-45713166 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 550-744 |
| Cow position: | chr18:1551466-1551661 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 552-748 |
| Cow position: | chr18:13907811-13907616 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 568-752 |
| Cow position: | chr18:2475826-2475641 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 139 |
| Conread position: | 593-709 |
| Cow position: | chr18:21710135-21710249 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 598-748 |
| Cow position: | chr18:21103156-21103301 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.