Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C06.5 |
| Conread position: | 479-663 |
| Cow position: | chr2:50917761-50917943 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 119, 8 |
| Conread position: | 483-746 |
| Cow position: | chr2:19606989-19606732 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 111, 17 |
| Conread position: | 484-748 |
| Cow position: | chr2:41698076-41698347 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 111, 16 |
| Conread position: | 484-769 |
| Cow position: | chr2:62873301-62873023 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 485-748 |
| Cow position: | chr2:55007247-55007513 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 177, 16 |
| Conread position: | 487-696 |
| Cow position: | chr2:874844-875051 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 487-734 |
| Cow position: | chr2:52022247-52022001 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 491-738 |
| Cow position: | chr2:8551531-8551285 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 493-749 |
| Cow position: | chr2:73160630-73160369 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 103, 7 |
| Conread position: | 496-663 |
| Cow position: | chr2:14872763-14872596 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 496-748 |
| Cow position: | chr2:41100113-41099868 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 500-744 |
| Cow position: | chr2:29687183-29687431 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 7 |
| Conread position: | 504-667 |
| Cow position: | chr2:75875243-75875080 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 505-709 |
| Cow position: | chr2:39822935-39823139 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 505-751 |
| Cow position: | chr2:20250036-20249791 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 505-751 |
| Cow position: | chr2:28306294-28306540 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 511-744 |
| Cow position: | chr2:36320077-36319843 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 515-692 |
| Cow position: | chr2:41308906-41309081 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 517-748 |
| Cow position: | chr2:21330607-21330376 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 518-744 |
| Cow position: | chr2:4820560-4820787 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 544-750 |
| Cow position: | chr2:47571157-47571361 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 546-747 |
| Cow position: | chr2:82970886-82971088 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 549-754 |
| Cow position: | chr2:11278098-11277892 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 552-757 |
| Cow position: | chr2:85032726-85032529 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 553-741 |
| Cow position: | chr2:52689790-52689973 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 153, 43 |
| Conread position: | 553-746 |
| Cow position: | chr2:17484517-17484318 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 554-750 |
| Cow position: | chr2:8792617-8792821 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 557-757 |
| Cow position: | chr2:58345469-58345671 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 78 |
Show alignments to all cow chromosomes.