Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C06.5 |
| Conread position: | 464-734 |
| Cow position: | chr25:15444773-15444502 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 480-748 |
| Cow position: | chr25:10433386-10433654 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 480-748 |
| Cow position: | chr25:19932349-19932080 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 483-745 |
| Cow position: | chr25:24320275-24320535 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 499-747 |
| Cow position: | chr25:25846717-25846470 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 499-748 |
| Cow position: | chr25:13983255-13983003 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 129 |
| Conread position: | 500-748 |
| Cow position: | chr25:30624244-30624487 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 57 |
| Conread position: | 504-743 |
| Cow position: | chr25:12166025-12165788 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 505-704 |
| Cow position: | chr25:1842536-1842335 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 505-748 |
| Cow position: | chr25:14306662-14306418 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 546-703 |
| Cow position: | chr25:13105626-13105782 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 546-744 |
| Cow position: | chr25:23968178-23968376 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 550-744 |
| Cow position: | chr25:15620871-15621061 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 552-673 |
| Cow position: | chr25:8843419-8843297 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 552-748 |
| Cow position: | chr25:10323922-10324118 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 552-748 |
| Cow position: | chr25:15997223-15997027 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 552-748 |
| Cow position: | chr25:29999680-29999879 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 552-749 |
| Cow position: | chr25:11994488-11994687 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 588-748 |
| Cow position: | chr25:13980571-13980415 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 595-749 |
| Cow position: | chr25:12168-12018 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 7 |
Show alignments to all cow chromosomes.