Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C06.5 |
| Conread position: | 484-748 |
| Cow position: | chr29:9697174-9696915 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 487-748 |
| Cow position: | chr29:17614992-17614731 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 491-641 |
| Cow position: | chr29:5275551-5275401 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 493-746 |
| Cow position: | chr29:5167530-5167781 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 105, 8 |
| Conread position: | 515-745 |
| Cow position: | chr29:29724668-29724441 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 25 |
| Conread position: | 517-717 |
| Cow position: | chr29:23725212-23725010 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 518-746 |
| Cow position: | chr29:41811262-41811034 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 523-744 |
| Cow position: | chr29:8153173-8153391 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 6, 113 |
| Conread position: | 523-748 |
| Cow position: | chr29:7046675-7046450 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 523-761 |
| Cow position: | chr29:3843902-3843670 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 526-748 |
| Cow position: | chr29:22254627-22254402 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 531-757 |
| Cow position: | chr29:4084357-4084130 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 545-745 |
| Cow position: | chr29:11991892-11991697 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 161, 45 |
| Conread position: | 547-757 |
| Cow position: | chr29:45510431-45510227 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 550-746 |
| Cow position: | chr29:8089891-8089690 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 550-748 |
| Cow position: | chr29:5091590-5091394 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 550-748 |
| Cow position: | chr29:28268577-28268773 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 552-746 |
| Cow position: | chr29:38739419-38739225 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 552-748 |
| Cow position: | chr29:14039369-14039565 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 125, 69 |
| Conread position: | 556-753 |
| Cow position: | chr29:28691670-28691867 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 557-748 |
| Cow position: | chr29:11374420-11374611 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 157 |
| Conread position: | 597-735 |
| Cow position: | chr29:13002564-13002429 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 64, 14 |
Show alignments to all cow chromosomes.