Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C06.5 |
| Conread position: | 487-732 |
| Cow position: | chr4:51569601-51569848 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 487-746 |
| Cow position: | chr4:53939773-53940033 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 491-747 |
| Cow position: | chr4:55895661-55895401 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 498-748 |
| Cow position: | chr4:30274621-30274374 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 499-654 |
| Cow position: | chr4:52069336-52069183 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 499-705 |
| Cow position: | chr4:27186955-27186749 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 499-746 |
| Cow position: | chr4:33539286-33539530 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 499-747 |
| Cow position: | chr4:43640783-43641032 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 499-750 |
| Cow position: | chr4:48101905-48102148 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 501-748 |
| Cow position: | chr4:50833698-50833452 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 505-748 |
| Cow position: | chr4:22142457-22142214 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 137 |
| Conread position: | 505-751 |
| Cow position: | chr4:23338560-23338324 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 505-751 |
| Cow position: | chr4:35112213-35111972 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 518-744 |
| Cow position: | chr4:38071688-38071916 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 518-746 |
| Cow position: | chr4:35482803-35483033 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 519-745 |
| Cow position: | chr4:15214734-15214506 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 523-746 |
| Cow position: | chr4:38671056-38671277 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 525-747 |
| Cow position: | chr4:18851740-18851514 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 546-746 |
| Cow position: | chr4:11330155-11329958 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 546-748 |
| Cow position: | chr4:40662432-40662632 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 550-748 |
| Cow position: | chr4:44195502-44195700 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 156, 82 |
| Conread position: | 554-748 |
| Cow position: | chr4:67440683-67440874 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 142 |
| Conread position: | 557-744 |
| Cow position: | chr4:59020862-59020667 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.