Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C06.5 |
| Conread position: | 480-678 |
| Cow position: | chr8:14891293-14891490 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 480-746 |
| Cow position: | chr8:11852809-11853069 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 6 |
| Conread position: | 480-746 |
| Cow position: | chr8:37884261-37884000 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 480-756 |
| Cow position: | chr8:16643366-16643093 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 480-759 |
| Cow position: | chr8:22196909-22197197 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 483-650 |
| Cow position: | chr8:24505351-24505516 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 17 |
| Conread position: | 483-748 |
| Cow position: | chr8:54569901-54569630 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 486-746 |
| Cow position: | chr8:22990639-22990884 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 177, 20 |
| Conread position: | 487-666 |
| Cow position: | chr8:22071167-22071343 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 489-756 |
| Cow position: | chr8:15389085-15388820 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 498-748 |
| Cow position: | chr8:5865818-5866068 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 503-752 |
| Cow position: | chr8:3336245-3336503 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 505-749 |
| Cow position: | chr8:1939268-1939515 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 508-748 |
| Cow position: | chr8:25760647-25760886 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 509-753 |
| Cow position: | chr8:47180983-47180740 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 8, 65 |
| Conread position: | 514-748 |
| Cow position: | chr8:39050230-39050467 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 516-748 |
| Cow position: | chr8:19654038-19653814 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 56 |
| Conread position: | 519-743 |
| Cow position: | chr8:51981782-51982006 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 523-735 |
| Cow position: | chr8:47198354-47198143 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 523-748 |
| Cow position: | chr8:15847625-15847851 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 524-755 |
| Cow position: | chr8:19679223-19678998 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 525-748 |
| Cow position: | chr8:48485974-48486200 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 545-702 |
| Cow position: | chr8:4464098-4463941 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 550-741 |
| Cow position: | chr8:48717928-48717738 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 57 |
| Conread position: | 551-748 |
| Cow position: | chr8:18711215-18711016 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 552-742 |
| Cow position: | chr8:47319692-47319882 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 552-748 |
| Cow position: | chr8:45998313-45998510 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 561-748 |
| Cow position: | chr8:9337462-9337271 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 569-744 |
| Cow position: | chr8:1187327-1187151 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 573-743 |
| Cow position: | chr8:29154493-29154328 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 136, 48 |
| Conread position: | 592-748 |
| Cow position: | chr8:22480388-22480234 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 609-745 |
| Cow position: | chr8:50388729-50388592 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.