Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C06.5 |
| Conread position: | 480-741 |
| Cow position: | chrX:29522541-29522798 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 480-744 |
| Cow position: | chrX:27479594-27479863 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 483-752 |
| Cow position: | chrX:274551-274825 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 113, 17 |
| Conread position: | 487-711 |
| Cow position: | chrX:33418995-33419221 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 107, 14 |
| Conread position: | 491-747 |
| Cow position: | chrX:48543471-48543211 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 498-651 |
| Cow position: | chrX:43951964-43951808 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 498-666 |
| Cow position: | chrX:16048161-16048331 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 499-761 |
| Cow position: | chrX:20375589-20375847 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 516-743 |
| Cow position: | chrX:3175254-3175479 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 523-746 |
| Cow position: | chrX:2521828-2522053 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 133 |
| Conread position: | 525-751 |
| Cow position: | chrX:19887075-19887298 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 546-747 |
| Cow position: | chrX:14228994-14228791 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 80 |
| Conread position: | 549-744 |
| Cow position: | chrX:40743398-40743593 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 550-725 |
| Cow position: | chrX:27279088-27278916 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 72 |
| Conread position: | 552-693 |
| Cow position: | chrX:12112380-12112520 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 552-708 |
| Cow position: | chrX:24941202-24941046 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 552-751 |
| Cow position: | chrX:25015702-25015498 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.