Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C21.3 |
| Conread position: | 8-648 |
| Cow position: | chr10:40348267-40347580 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 444 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 22-481 |
| Cow position: | chr10:46762606-46763092 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 321 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr10:8681019-8681702 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr10:21738330-21737646 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 440 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr10:23848361-23849044 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr10:30683093-30682414 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 440 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 7, 211 |
| Conread position: | 22-648 |
| Cow position: | chr10:51950698-51950019 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 437 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 23-648 |
| Cow position: | chr10:48375047-48374367 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 35-476 |
| Cow position: | chr10:46173781-46173307 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 173 |
| Conread position: | 36-342 |
| Cow position: | chr10:28604238-28604560 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 36-486 |
| Cow position: | chr10:51557810-51558296 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 334 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 16, 196 |
| Conread position: | 36-645 |
| Cow position: | chr10:41879350-41880014 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 387 |
| Conread position: | 36-645 |
| Cow position: | chr10:44706296-44705633 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 433 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 16, 629 |
| Conread position: | 36-648 |
| Cow position: | chr10:278939-278278 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 576 |
| Conread position: | 36-648 |
| Cow position: | chr10:1663547-1662889 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 426 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 16, 209 |
| Conread position: | 36-648 |
| Cow position: | chr10:19513645-19514308 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 437 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 16, 193 |
| Conread position: | 36-648 |
| Cow position: | chr10:25564139-25563476 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 36-648 |
| Cow position: | chr10:25651004-25650343 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 432 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 14, 230 |
| Conread position: | 36-648 |
| Cow position: | chr10:26293075-26292410 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 585 |
| Conread position: | 36-648 |
| Cow position: | chr10:32008488-32009154 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 36-648 |
| Cow position: | chr10:32364354-32365017 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-648 |
| Cow position: | chr10:41140598-41139942 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 424 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 129 |
| Conread position: | 36-648 |
| Cow position: | chr10:52827201-52826549 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 424 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 36-648 |
| Cow position: | chr10:57987289-57986619 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 445 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 196 |
| Conread position: | 36-662 |
| Cow position: | chr10:41159835-41160511 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 376 |
| Conread position: | 49-487 |
| Cow position: | chr10:24975407-24974947 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 49-492 |
| Cow position: | chr10:4584751-4584292 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 314 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 49-672 |
| Cow position: | chr10:19542999-19542339 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 438 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 51-648 |
| Cow position: | chr10:22103917-22104558 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 51-648 |
| Cow position: | chr10:35824914-35824265 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 180 |
| Conread position: | 51-648 |
| Cow position: | chr10:57554909-57554257 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 115-476 |
| Cow position: | chr10:57297162-57296795 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 91, 47 |
| Conread position: | 119-490 |
| Cow position: | chr10:18040504-18040894 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 122-476 |
| Cow position: | chr10:48657608-48657262 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 129-445 |
| Cow position: | chr10:27787129-27787461 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 130-443 |
| Cow position: | chr10:39650963-39650632 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 146 |
| Conread position: | 131-607 |
| Cow position: | chr10:35024181-35024663 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 133-648 |
| Cow position: | chr10:32559689-32560196 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 349 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 133-671 |
| Cow position: | chr10:32318971-32319533 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 135-578 |
| Cow position: | chr10:41772926-41772462 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 306 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 144-672 |
| Cow position: | chr10:10685854-10686420 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 380 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 153-492 |
| Cow position: | chr10:43711419-43711078 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 74 |
| Conread position: | 153-645 |
| Cow position: | chr10:49430190-49430718 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 346 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 153-648 |
| Cow position: | chr10:24297962-24297425 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 356 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 153-672 |
| Cow position: | chr10:24738138-24737597 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 347 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 12 |
| Conread position: | 153-672 |
| Cow position: | chr10:47964538-47964017 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 341 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 155-645 |
| Cow position: | chr10:14806481-14807011 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 349 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 155-648 |
| Cow position: | chr10:26670214-26670746 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 352 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 29, 163 |
| Conread position: | 156-444 |
| Cow position: | chr10:25647351-25647046 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 217 |
| Conread position: | 156-463 |
| Cow position: | chr10:63812835-63812509 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 156-476 |
| Cow position: | chr10:21450653-21450317 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 38, 163 |
| Conread position: | 156-476 |
| Cow position: | chr10:25340702-25341032 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 156-476 |
| Cow position: | chr10:29629724-29629385 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-476 |
| Cow position: | chr10:47156265-47156598 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 156-487 |
| Cow position: | chr10:51780898-51780543 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 254 |
| Conread position: | 156-490 |
| Cow position: | chr10:32830188-32830539 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 248 |
| Conread position: | 156-490 |
| Cow position: | chr10:55099377-55099027 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 156-585 |
| Cow position: | chr10:24756722-24757177 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 156-621 |
| Cow position: | chr10:12669200-12669687 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 156-634 |
| Cow position: | chr10:39776458-39775943 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 341 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 22, 149 |
| Conread position: | 156-643 |
| Cow position: | chr10:33868638-33868111 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 256 |
| Conread position: | 156-646 |
| Cow position: | chr10:24309649-24309138 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 156-648 |
| Cow position: | chr10:1380047-1380574 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 361 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr10:7279553-7279023 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr10:8292674-8293208 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 251 |
| Conread position: | 156-648 |
| Cow position: | chr10:10584675-10585208 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 353 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr10:14333296-14332763 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr10:19142059-19141531 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr10:21426754-21426225 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 246 |
| Conread position: | 156-648 |
| Cow position: | chr10:22344023-22344542 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 348 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 156-648 |
| Cow position: | chr10:23411593-23412124 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 156-648 |
| Cow position: | chr10:25633292-25632759 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr10:28031380-28030856 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 360 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr10:29107233-29106736 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 344 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr10:30688545-30689076 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 522 |
| Conread position: | 156-648 |
| Cow position: | chr10:30719238-30719773 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr10:32580783-32581316 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 351 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 156-648 |
| Cow position: | chr10:32703311-32703840 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 356 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 156-648 |
| Cow position: | chr10:38842712-38843241 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr10:39813846-39813312 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 156-648 |
| Cow position: | chr10:39849678-39849145 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 348 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 119 |
| Conread position: | 156-648 |
| Cow position: | chr10:41569650-41570182 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 354 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 329 |
| Conread position: | 156-648 |
| Cow position: | chr10:45647408-45647934 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 156-648 |
| Cow position: | chr10:47909168-47909695 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 156-648 |
| Cow position: | chr10:55010362-55010884 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 348 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 157-490 |
| Cow position: | chr10:42744147-42744495 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 157-648 |
| Cow position: | chr10:15620833-15620308 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 158-476 |
| Cow position: | chr10:31526267-31526592 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 158-486 |
| Cow position: | chr10:8458776-8459123 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 158-490 |
| Cow position: | chr10:21516462-21516116 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 158-648 |
| Cow position: | chr10:32086237-32086766 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 294 |
| Conread position: | 158-672 |
| Cow position: | chr10:50554055-50553521 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 18 |
| Conread position: | 161-492 |
| Cow position: | chr10:51212685-51213029 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 162-481 |
| Cow position: | chr10:44723954-44723615 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 169-648 |
| Cow position: | chr10:41635986-41636480 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 172-487 |
| Cow position: | chr10:54128257-54128577 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 147, 15 |
| Conread position: | 176-648 |
| Cow position: | chr10:22645602-22646106 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 331 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 176-672 |
| Cow position: | chr10:32827311-32827841 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 349 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 177-648 |
| Cow position: | chr10:2847471-2847965 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 318 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 177-648 |
| Cow position: | chr10:39440750-39441248 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 179-621 |
| Cow position: | chr10:53158187-53158668 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 326 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 186-490 |
| Cow position: | chr10:29756027-29755720 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 19, 160 |
| Conread position: | 189-481 |
| Cow position: | chr10:4183998-4183683 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 189-486 |
| Cow position: | chr10:3182098-3181781 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 189-636 |
| Cow position: | chr10:57371174-57370707 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 317 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 21, 315 |
| Conread position: | 189-648 |
| Cow position: | chr10:20515498-20515991 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 190-492 |
| Cow position: | chr10:23650107-23649787 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 192-572 |
| Cow position: | chr10:42389344-42388944 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 194-474 |
| Cow position: | chr10:41654381-41654087 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 201-506 |
| Cow position: | chr10:46193968-46194274 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 79 |
| Conread position: | 201-648 |
| Cow position: | chr10:53484308-53483832 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 82, 11 |
| Conread position: | 217-648 |
| Cow position: | chr10:326154-325680 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 315 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 13, 186 |
| Conread position: | 218-490 |
| Cow position: | chr10:20368559-20368274 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 220-648 |
| Cow position: | chr10:26923677-26923211 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 255 |
| Conread position: | 220-648 |
| Cow position: | chr10:53336950-53337404 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 185 |
| Conread position: | 223-647 |
| Cow position: | chr10:40698055-40697600 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 225-445 |
| Cow position: | chr10:28041254-28041019 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 225-671 |
| Cow position: | chr10:40706143-40706603 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 304 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 228-490 |
| Cow position: | chr10:20452712-20452985 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 228-647 |
| Cow position: | chr10:39077119-39077560 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 53, 167 |
| Conread position: | 228-662 |
| Cow position: | chr10:66773774-66773299 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 239-646 |
| Cow position: | chr10:2117809-2117366 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 162 |
| Conread position: | 249-490 |
| Cow position: | chr10:14907903-14908153 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 253-476 |
| Cow position: | chr10:20381344-20381107 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 276-487 |
| Cow position: | chr10:4344479-4344264 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 276-672 |
| Cow position: | chr10:28147359-28146934 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 288 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 43, 217 |
| Conread position: | 277-490 |
| Cow position: | chr10:36467179-36466958 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 286-486 |
| Cow position: | chr10:11109970-11110173 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 286-648 |
| Cow position: | chr10:37126523-37126139 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 286-648 |
| Cow position: | chr10:37789309-37788918 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 286-662 |
| Cow position: | chr10:15489513-15489920 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 288-490 |
| Cow position: | chr10:1721179-1720966 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 302-612 |
| Cow position: | chr10:36448920-36449236 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 91 |
| Conread position: | 364-648 |
| Cow position: | chr10:36230296-36230583 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 131 |
| Conread position: | 374-672 |
| Cow position: | chr10:33903751-33903454 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 83 |
| Conread position: | 381-648 |
| Cow position: | chr10:2429718-2429443 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 405-672 |
| Cow position: | chr10:43847985-43848267 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 243 |
| Conread position: | 524-648 |
| Cow position: | chr10:42461012-42460887 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 524-657 |
| Cow position: | chr10:20111701-20111834 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 524-672 |
| Cow position: | chr10:8365779-8365628 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 126, 78 |
Show alignments to all cow chromosomes.