Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C21.3 |
| Conread position: | 7-599 |
| Cow position: | chr11:7109382-7108757 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 408 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 8-645 |
| Cow position: | chr11:76372033-76371352 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 432 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 65, 99 |
| Conread position: | 19-648 |
| Cow position: | chr11:15987287-15987965 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 231 |
| Conread position: | 19-648 |
| Cow position: | chr11:28227748-28227063 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 217 |
| Conread position: | 22-481 |
| Cow position: | chr11:2349986-2350481 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-481 |
| Cow position: | chr11:41744594-41745089 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-481 |
| Cow position: | chr11:49013027-49012532 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 330 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-592 |
| Cow position: | chr11:25099136-25098510 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 407 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-596 |
| Cow position: | chr11:38600898-38600274 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 411 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 209 |
| Conread position: | 22-598 |
| Cow position: | chr11:52421506-52422134 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 399 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 7, 208 |
| Conread position: | 22-648 |
| Cow position: | chr11:10699710-10699030 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 106 |
| Conread position: | 22-648 |
| Cow position: | chr11:19062041-19061358 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr11:28124548-28125231 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr11:39585688-39585005 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr11:47737504-47736829 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 211 |
| Conread position: | 29-648 |
| Cow position: | chr11:56917945-56917291 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 422 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 36-492 |
| Cow position: | chr11:55484306-55484782 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 320 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 10, 104 |
| Conread position: | 36-527 |
| Cow position: | chr11:52845593-52846112 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 16, 187 |
| Conread position: | 36-611 |
| Cow position: | chr11:73467366-73466741 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 400 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 169 |
| Conread position: | 36-643 |
| Cow position: | chr11:40773968-40773330 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 36-648 |
| Cow position: | chr11:7121915-7121247 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-648 |
| Cow position: | chr11:17548227-17548874 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 36-648 |
| Cow position: | chr11:27725844-27725185 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 36-648 |
| Cow position: | chr11:30254283-30254937 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 438 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 36-648 |
| Cow position: | chr11:32078731-32078063 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 436 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 196 |
| Conread position: | 36-648 |
| Cow position: | chr11:32478764-32478096 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 36-648 |
| Cow position: | chr11:63391427-63390763 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-648 |
| Cow position: | chr11:72312509-72313164 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 428 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 192 |
| Conread position: | 36-648 |
| Cow position: | chr11:84966166-84966830 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 213 |
| Conread position: | 36-657 |
| Cow position: | chr11:4268097-4267428 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 435 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 16, 191 |
| Conread position: | 36-672 |
| Cow position: | chr11:81339336-81338646 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 39-648 |
| Cow position: | chr11:47973800-47973136 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 637 |
| Conread position: | 39-648 |
| Cow position: | chr11:57626122-57625460 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 147 |
| Conread position: | 40-671 |
| Cow position: | chr11:20805766-20805108 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 435 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 8, 96 |
| Conread position: | 49-411 |
| Cow position: | chr11:12504783-12504401 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 33, 283 |
| Conread position: | 49-490 |
| Cow position: | chr11:76565514-76565986 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 49-648 |
| Cow position: | chr11:28392954-28393593 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 417 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 24, 116 |
| Conread position: | 49-648 |
| Cow position: | chr11:49237888-49237248 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 414 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 52-594 |
| Cow position: | chr11:32454127-32454722 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 389 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 21, 275 |
| Conread position: | 54-647 |
| Cow position: | chr11:58138779-58139422 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 177 |
| Conread position: | 114-478 |
| Cow position: | chr11:418581-418204 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 114-492 |
| Cow position: | chr11:77681805-77682193 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 115-638 |
| Cow position: | chr11:3262848-3263397 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 117-490 |
| Cow position: | chr11:67864131-67863739 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 36, 98 |
| Conread position: | 128-487 |
| Cow position: | chr11:62419877-62420246 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 128-646 |
| Cow position: | chr11:56479778-56479211 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 374 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 110 |
| Conread position: | 145-457 |
| Cow position: | chr11:76277088-76276757 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 153-476 |
| Cow position: | chr11:8265709-8266052 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 153-492 |
| Cow position: | chr11:20494891-20494554 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 124, 39 |
| Conread position: | 153-645 |
| Cow position: | chr11:9155007-9154477 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 349 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 154-631 |
| Cow position: | chr11:38796016-38796507 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 155-476 |
| Cow position: | chr11:67446057-67445719 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 155-648 |
| Cow position: | chr11:30201507-30200977 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 155-648 |
| Cow position: | chr11:33000074-33000595 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 350 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 155-648 |
| Cow position: | chr11:67452837-67453371 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 358 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 145 |
| Conread position: | 156-410 |
| Cow position: | chr11:42364881-42365131 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 156-442 |
| Cow position: | chr11:39807109-39807414 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-461 |
| Cow position: | chr11:10884481-10884793 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 131 |
| Conread position: | 156-461 |
| Cow position: | chr11:35571393-35571069 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 250 |
| Conread position: | 156-461 |
| Cow position: | chr11:69219858-69219550 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 156-467 |
| Cow position: | chr11:81923686-81923359 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 156-475 |
| Cow position: | chr11:8819412-8819743 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 156-476 |
| Cow position: | chr11:15720544-15720203 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 251 |
| Conread position: | 156-476 |
| Cow position: | chr11:26122734-26122399 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-476 |
| Cow position: | chr11:37280498-37280166 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 158 |
| Conread position: | 156-477 |
| Cow position: | chr11:21888240-21887904 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 156-481 |
| Cow position: | chr11:31864801-31865145 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 156-481 |
| Cow position: | chr11:41234858-41235203 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-490 |
| Cow position: | chr11:12176609-12176958 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 156-490 |
| Cow position: | chr11:15127001-15127352 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-490 |
| Cow position: | chr11:66731340-66731680 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-617 |
| Cow position: | chr11:11990172-11990674 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 344 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-647 |
| Cow position: | chr11:40403578-40403044 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 357 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 250 |
| Conread position: | 156-648 |
| Cow position: | chr11:9080361-9079848 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 232 |
| Conread position: | 156-648 |
| Cow position: | chr11:10850304-10850837 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 359 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr11:17105498-17104973 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 350 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 22, 161 |
| Conread position: | 156-648 |
| Cow position: | chr11:20732039-20731506 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 357 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 156-648 |
| Cow position: | chr11:30105009-30104475 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 356 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr11:33602446-33601912 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 359 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr11:38575299-38574767 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 351 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr11:42310263-42309754 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 347 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 156-648 |
| Cow position: | chr11:44254260-44254790 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 356 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr11:53429838-53429306 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr11:58135902-58136433 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 262 |
| Conread position: | 156-648 |
| Cow position: | chr11:71331686-71332218 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 156-648 |
| Cow position: | chr11:73799516-73798982 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 356 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-672 |
| Cow position: | chr11:77435755-77436285 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 353 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 149, 48 |
| Conread position: | 157-442 |
| Cow position: | chr11:58947828-58948127 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 158-486 |
| Cow position: | chr11:7228439-7228788 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 158-486 |
| Cow position: | chr11:27659434-27659783 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 158-486 |
| Cow position: | chr11:43511786-43511437 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 248 |
| Conread position: | 158-590 |
| Cow position: | chr11:74194044-74193592 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 158-648 |
| Cow position: | chr11:8444800-8444271 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 158-648 |
| Cow position: | chr11:48788512-48788009 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 159-490 |
| Cow position: | chr11:26052332-26051982 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 265 |
| Conread position: | 159-490 |
| Cow position: | chr11:31749466-31749128 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 47 |
| Conread position: | 159-612 |
| Cow position: | chr11:8562317-8562803 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 75 |
| Conread position: | 162-648 |
| Cow position: | chr11:2533788-2534315 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 251 |
| Conread position: | 165-450 |
| Cow position: | chr11:24108129-24108438 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 187 |
| Conread position: | 165-648 |
| Cow position: | chr11:33042525-33042028 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 170-592 |
| Cow position: | chr11:59600815-59601269 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 312 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 170-648 |
| Cow position: | chr11:29663849-29663333 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 349 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 173-648 |
| Cow position: | chr11:15652354-15652845 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 176-487 |
| Cow position: | chr11:30181415-30181106 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 176-665 |
| Cow position: | chr11:15250615-15250108 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 176-671 |
| Cow position: | chr11:16120226-16119701 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 119 |
| Conread position: | 177-487 |
| Cow position: | chr11:18147323-18147012 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 177-490 |
| Cow position: | chr11:27937614-27937941 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 150 |
| Conread position: | 183-490 |
| Cow position: | chr11:54482152-54481840 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 186-671 |
| Cow position: | chr11:69167475-69167995 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 153 |
| Conread position: | 189-492 |
| Cow position: | chr11:3075881-3076187 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 191-480 |
| Cow position: | chr11:53308680-53308369 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 191-490 |
| Cow position: | chr11:72484594-72484901 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 192-648 |
| Cow position: | chr11:3085948-3085496 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 198-666 |
| Cow position: | chr11:45549382-45549883 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 201-490 |
| Cow position: | chr11:21897452-21897155 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 202-672 |
| Cow position: | chr11:75403263-75402763 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 326 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 206-473 |
| Cow position: | chr11:16591877-16592149 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 217-648 |
| Cow position: | chr11:18124035-18123573 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 249 |
| Conread position: | 219-481 |
| Cow position: | chr11:21880561-21880300 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 221-490 |
| Cow position: | chr11:12950910-12950628 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 227-480 |
| Cow position: | chr11:26562039-26561781 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 237-492 |
| Cow position: | chr11:24395603-24395872 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 172 |
| Conread position: | 253-648 |
| Cow position: | chr11:25564042-25564472 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 276-621 |
| Cow position: | chr11:82146324-82145956 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 277-490 |
| Cow position: | chr11:25183379-25183598 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 119 |
| Conread position: | 278-645 |
| Cow position: | chr11:4033116-4032729 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 170 |
| Conread position: | 282-475 |
| Cow position: | chr11:9294227-9294030 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 282-648 |
| Cow position: | chr11:15835241-15835637 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 286-481 |
| Cow position: | chr11:65001592-65001797 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 288-498 |
| Cow position: | chr11:26399807-26400027 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 108 |
| Conread position: | 289-646 |
| Cow position: | chr11:54727790-54728174 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 107 |
| Conread position: | 289-648 |
| Cow position: | chr11:44515448-44515057 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 289-648 |
| Cow position: | chr11:44516844-44516453 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 291-460 |
| Cow position: | chr11:8018094-8018272 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 291-598 |
| Cow position: | chr11:13087986-13088323 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 292-490 |
| Cow position: | chr11:42466897-42466694 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 337-578 |
| Cow position: | chr11:18889743-18890000 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 181 |
| Conread position: | 350-666 |
| Cow position: | chr11:80472542-80472217 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 408-648 |
| Cow position: | chr11:67167393-67167149 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 512-672 |
| Cow position: | chr11:21879210-21879045 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 524-660 |
| Cow position: | chr11:42520302-42520169 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 524-671 |
| Cow position: | chr11:75511601-75511449 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 525-672 |
| Cow position: | chr11:31892545-31892697 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 526-648 |
| Cow position: | chr11:11256665-11256788 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.