Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               19-481
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               324
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               7, 47
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               446
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               29-634
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               427
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               23, 392
               

               Conread position:
               35-672
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               36-481
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               325
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               14, 196
               

               Conread position:
               36-492
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               36-662
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               434
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               14, 101
               

               Conread position:
               49-476
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               51-648
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               420
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               22, 184
               

               Conread position:
               115-671
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               389
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               117-480
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               145-482
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               76, 14
               

               Conread position:
               153-476
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 58
               

               Conread position:
               155-492
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               156-470
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               156-475
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-492
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               156-511
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               22, 259
               

               Conread position:
               156-527
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               25, 46
               

               Conread position:
               156-596
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               322
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               156-617
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               327
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-647
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               353
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               351
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               355
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 260
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               357
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               22, 253
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               354
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               351
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               351
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               157-476
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 172
               

               Conread position:
               157-638
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               162-467
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               22, 254
               

               Conread position:
               173-492
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               177-648
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               336
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               184-442
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               184-648
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               339
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               37, 269
               

               Conread position:
               185-648
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               335
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               188-645
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               191-647
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 213
               

               Conread position:
               192-648
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               326
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               14, 410
               

               Conread position:
               202-647
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               27, 269
               

               Conread position:
               204-473
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               219-486
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 185
               

               Conread position:
               220-481
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               227-476
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 221
               

               Conread position:
               230-647
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 103
               

               Conread position:
               232-648
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               250-648
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 80
               

               Conread position:
               253-648
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 418
               

               Conread position:
               253-655
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               291
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               33, 219
               

               Conread position:
               282-498
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               286-583
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               32, 110
               

               Conread position:
               290-622
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               292-492
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 74
               

               Conread position:
               306-648
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               307-623
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 197
               

               Conread position:
               354-648
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               422-646
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               524-649
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.